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1II0
Biol. Unit 2
Info
Asym.Unit (192 KB)
Biol.Unit 1 (94 KB)
Biol.Unit 2 (95 KB)
Biol.Unit 3 (359 KB)
Biol.Unit 4 (183 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF THE ESCHERICHIA COLI ARSENITE-TRANSLOCATING ATPASE
Authors
:
T. Zhou, S. Radaev, B. P. Rosen, D. L. Gatti
Date
:
20 Apr 01 (Deposition) - 12 Sep 01 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.40
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Biol. Unit 3: A,B (2x)
Biol. Unit 4: A,B (1x)
Keywords
:
Arsa Atpase, Atp Binding Site, Hydrolase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
T. Zhou, S. Radaev, B. P. Rosen, D. L. Gatti
Conformational Changes In Four Regions Of The Escherichia Coli Arsa Atpase Link Atp Hydrolysis To Ion Translocation.
J. Biol. Chem. V. 276 30414 2001
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Hetero Components
(3, 3)
Info
All Hetero Components
1a: ADENOSINE-5'-DIPHOSPHATE (ADPa)
1b: ADENOSINE-5'-DIPHOSPHATE (ADPb)
2a: ADENOSINE-5'-TRIPHOSPHATE (ATPa)
2b: ADENOSINE-5'-TRIPHOSPHATE (ATPb)
3a: CADMIUM ION (CDa)
3b: CADMIUM ION (CDb)
3c: CADMIUM ION (CDc)
3d: CADMIUM ION (CDd)
3e: CADMIUM ION (CDe)
3f: CADMIUM ION (CDf)
3g: CADMIUM ION (CDg)
3h: CADMIUM ION (CDh)
3i: CADMIUM ION (CDi)
3j: CADMIUM ION (CDj)
3k: CADMIUM ION (CDk)
3l: CADMIUM ION (CDl)
3m: CADMIUM ION (CDm)
3n: CADMIUM ION (CDn)
3o: CADMIUM ION (CDo)
3p: CADMIUM ION (CDp)
3q: CADMIUM ION (CDq)
4a: CHLORIDE ION (CLa)
4b: CHLORIDE ION (CLb)
4c: CHLORIDE ION (CLc)
4d: CHLORIDE ION (CLd)
4e: CHLORIDE ION (CLe)
4f: CHLORIDE ION (CLf)
4g: CHLORIDE ION (CLg)
5a: MAGNESIUM ION (MGa)
5b: MAGNESIUM ION (MGb)
5c: MAGNESIUM ION (MGc)
5d: MAGNESIUM ION (MGd)
6a: TRIHYDROXYARSENITE(III) (TASa)
6b: TRIHYDROXYARSENITE(III) (TASb)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
ADP
1
Ligand/Ion
ADENOSINE-5'-DIPHOSPHATE
2
ATP
1
Ligand/Ion
ADENOSINE-5'-TRIPHOSPHATE
3
CD
-1
Ligand/Ion
CADMIUM ION
4
CL
-1
Ligand/Ion
CHLORIDE ION
5
MG
-1
Ligand/Ion
MAGNESIUM ION
6
TAS
1
Ligand/Ion
TRIHYDROXYARSENITE(III)
[
close Hetero Component info
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Sites
(21, 21)
Info
All Sites
01: AC4 (SOFTWARE)
02: AC5 (SOFTWARE)
03: AC6 (SOFTWARE)
04: AC7 (SOFTWARE)
05: AC9 (SOFTWARE)
06: BC2 (SOFTWARE)
07: BC4 (SOFTWARE)
08: BC5 (SOFTWARE)
09: BC6 (SOFTWARE)
10: BC7 (SOFTWARE)
11: BC8 (SOFTWARE)
12: CC2 (SOFTWARE)
13: CC3 (SOFTWARE)
14: CC4 (SOFTWARE)
15: CC5 (SOFTWARE)
16: CC6 (SOFTWARE)
17: CC9 (SOFTWARE)
18: DC1 (SOFTWARE)
19: DC3 (SOFTWARE)
20: DC5 (SOFTWARE)
21: DC7 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC4
SOFTWARE
CYS B:1113 , CYS B:1172 , SER B:1420 , CYS B:1422 , CD B:1595 , CL B:1597 , HOH B:2004
BINDING SITE FOR RESIDUE CD B 1594
02
AC5
SOFTWARE
CYS B:1172 , HIS B:1453 , CD B:1594 , CL B:1597 , CL B:1598 , HOH B:2003
BINDING SITE FOR RESIDUE CD B 1595
03
AC6
SOFTWARE
CYS B:1113 , HIS B:1148 , SER B:1420 , CL B:1599 , HOH B:2333
BINDING SITE FOR RESIDUE CD B 1596
04
AC7
SOFTWARE
ASP A:320 , HOH A:3026 , CL A:4000 , HIS B:1585 , HIS B:1587
BINDING SITE FOR RESIDUE CD A 600
05
AC9
SOFTWARE
HIS A:584 , HIS A:586 , GLU B:1326 , HOH B:2009
BINDING SITE FOR RESIDUE CD A 602
06
BC2
SOFTWARE
ASP A:386 , HIS A:388 , ASP B:1386 , HIS B:1388
BINDING SITE FOR RESIDUE CD A 604
07
BC4
SOFTWARE
HIS A:587 , HIS A:589 , ASP B:1321 , HIS B:1588 , HOH B:2199
BINDING SITE FOR RESIDUE CD B 1601
08
BC5
SOFTWARE
GLU A:326 , HIS B:1584 , HIS B:1586 , HOH B:2051
BINDING SITE FOR RESIDUE CD B 1602
09
BC6
SOFTWARE
GLU B:1168 , HIS B:1397
BINDING SITE FOR RESIDUE CD B 1603
10
BC7
SOFTWARE
HIS B:1589 , HOH B:2033 , HOH B:3031
BINDING SITE FOR RESIDUE CD B 1607
11
BC8
SOFTWARE
GLU B:1515 , HIS B:1520 , CL B:4001
BINDING SITE FOR RESIDUE CD B 1608
12
CC2
SOFTWARE
ALA B:1112 , CYS B:1113 , CYS B:1172 , HIS B:1453 , CD B:1594 , CD B:1595 , CL B:1598
BINDING SITE FOR RESIDUE CL B 1597
13
CC3
SOFTWARE
GLN B:1108 , GLY B:1111 , THR B:1114 , HIS B:1453 , CD B:1595 , CL B:1597 , HOH B:2003
BINDING SITE FOR RESIDUE CL B 1598
14
CC4
SOFTWARE
CYS B:1113 , ILE B:1117 , CD B:1596 , HOH B:2333
BINDING SITE FOR RESIDUE CL B 1599
15
CC5
SOFTWARE
ASP A:320 , HIS A:585 , HIS A:587 , CD A:600 , HIS B:1585 , HIS B:1587
BINDING SITE FOR RESIDUE CL A 4000
16
CC6
SOFTWARE
GLU B:1515 , CD B:1608 , HOH B:2195 , HOH B:3029
BINDING SITE FOR RESIDUE CL B 4001
17
CC9
SOFTWARE
THR B:1022 , ASP B:1045 , ADP B:1590 , HOH B:2007 , HOH B:2012 , HOH B:2236
BINDING SITE FOR RESIDUE MG B 1592
18
DC1
SOFTWARE
THR B:1341 , ATP B:1591 , HOH B:2073 , HOH B:2102 , HOH B:2209
BINDING SITE FOR RESIDUE MG B 1593
19
DC3
SOFTWARE
GLY B:1018 , VAL B:1019 , GLY B:1020 , LYS B:1021 , THR B:1022 , SER B:1023 , ASN B:1235 , GLY B:1236 , PHE B:1276 , LEU B:1277 , GLN B:1278 , ASN B:1281 , MET B:1282 , THR B:1501 , THR B:1502 , ARG B:1543 , MG B:1592 , TAS B:1701 , HOH B:2007 , HOH B:2012 , HOH B:2236
BINDING SITE FOR RESIDUE ADP B 1590
20
DC5
SOFTWARE
GLY B:1336 , GLY B:1337 , VAL B:1338 , GLY B:1339 , LYS B:1340 , THR B:1341 , THR B:1342 , ASN B:1527 , ASN B:1528 , PRO B:1566 , LEU B:1568 , GLU B:1571 , PRO B:1572 , MG B:1593 , HOH B:2073 , HOH B:2102 , HOH B:2193 , HOH B:2209
BINDING SITE FOR RESIDUE ATP B 1591
21
DC7
SOFTWARE
ARG B:1206 , GLU B:1500 , ARG B:1543 , ADP B:1590
BINDING SITE FOR RESIDUE TAS B 1701
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
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PROSITE Patterns/Profiles
(, 0)
Info
All PROSITE Patterns/Profiles
;
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End label:
Sorry, no Info available
[
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Exons
(0, 0)
Info
All Exons
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All Exon Boundaries
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(1, 4)
Info
All SCOP Domains
1a: SCOP_d1ii0a1 (A:1-296)
1b: SCOP_d1ii0a2 (A:309-589)
1c: SCOP_d1ii0b1 (B:1001-1296)
1d: SCOP_d1ii0b2 (B:1307-1589)
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Classes
(
)
(
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Folds
(
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(
)
Superfamilies
(
)
(
)
Families
(
)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
P-loop containing nucleoside triphosphate hydrolases
(2083)
Superfamily
:
P-loop containing nucleoside triphosphate hydrolases
(2083)
Family
:
Nitrogenase iron protein-like
(152)
Protein domain
:
Arsenite-translocating ATPase ArsA
(4)
Escherichia coli [TaxId: 562]
(4)
1a
d1ii0a1
A:1-296
1b
d1ii0a2
A:309-589
1c
d1ii0b1
B:1001-1296
1d
d1ii0b2
B:1307-1589
[
close SCOP info
]
CATH Domains
(1, 4)
Info
all CATH domains
1a: CATH_1ii0A01 (A:309-583)
1b: CATH_1ii0A02 (A:1-296)
1c: CATH_1ii0B02 (B:1001-1296)
1d: CATH_1ii0B01 (B:1309-1583)
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Homologous Superfamilies
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(
)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Rossmann fold
(7312)
Homologous Superfamily
:
P-loop containing nucleotide triphosphate hydrolases
(1378)
Escherichia coli. Organism_taxid: 562.
(54)
1a
1ii0A01
A:309-583
1b
1ii0A02
A:1-296
1c
1ii0B02
B:1001-1296
1d
1ii0B01
B:1309-1583
[
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Pfam Domains
(0, 0)
Info
all PFAM domains
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Chain B
Asymmetric Unit 1
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