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1II0
Asym. Unit
Info
Asym.Unit (192 KB)
Biol.Unit 1 (94 KB)
Biol.Unit 2 (95 KB)
Biol.Unit 3 (359 KB)
Biol.Unit 4 (183 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF THE ESCHERICHIA COLI ARSENITE-TRANSLOCATING ATPASE
Authors
:
T. Zhou, S. Radaev, B. P. Rosen, D. L. Gatti
Date
:
20 Apr 01 (Deposition) - 12 Sep 01 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.40
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Biol. Unit 3: A,B (2x)
Biol. Unit 4: A,B (1x)
Keywords
:
Arsa Atpase, Atp Binding Site, Hydrolase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
T. Zhou, S. Radaev, B. P. Rosen, D. L. Gatti
Conformational Changes In Four Regions Of The Escherichia Coli Arsa Atpase Link Atp Hydrolysis To Ion Translocation.
J. Biol. Chem. V. 276 30414 2001
[
close entry info
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Hetero Components
(6, 34)
Info
All Hetero Components
1a: ADENOSINE-5'-DIPHOSPHATE (ADPa)
1b: ADENOSINE-5'-DIPHOSPHATE (ADPb)
2a: ADENOSINE-5'-TRIPHOSPHATE (ATPa)
2b: ADENOSINE-5'-TRIPHOSPHATE (ATPb)
3a: CADMIUM ION (CDa)
3b: CADMIUM ION (CDb)
3c: CADMIUM ION (CDc)
3d: CADMIUM ION (CDd)
3e: CADMIUM ION (CDe)
3f: CADMIUM ION (CDf)
3g: CADMIUM ION (CDg)
3h: CADMIUM ION (CDh)
3i: CADMIUM ION (CDi)
3j: CADMIUM ION (CDj)
3k: CADMIUM ION (CDk)
3l: CADMIUM ION (CDl)
3m: CADMIUM ION (CDm)
3n: CADMIUM ION (CDn)
3o: CADMIUM ION (CDo)
3p: CADMIUM ION (CDp)
3q: CADMIUM ION (CDq)
4a: CHLORIDE ION (CLa)
4b: CHLORIDE ION (CLb)
4c: CHLORIDE ION (CLc)
4d: CHLORIDE ION (CLd)
4e: CHLORIDE ION (CLe)
4f: CHLORIDE ION (CLf)
4g: CHLORIDE ION (CLg)
5a: MAGNESIUM ION (MGa)
5b: MAGNESIUM ION (MGb)
5c: MAGNESIUM ION (MGc)
5d: MAGNESIUM ION (MGd)
6a: TRIHYDROXYARSENITE(III) (TASa)
6b: TRIHYDROXYARSENITE(III) (TASb)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
ADP
2
Ligand/Ion
ADENOSINE-5'-DIPHOSPHATE
2
ATP
2
Ligand/Ion
ADENOSINE-5'-TRIPHOSPHATE
3
CD
17
Ligand/Ion
CADMIUM ION
4
CL
7
Ligand/Ion
CHLORIDE ION
5
MG
4
Ligand/Ion
MAGNESIUM ION
6
TAS
2
Ligand/Ion
TRIHYDROXYARSENITE(III)
[
close Hetero Component info
]
Sites
(34, 34)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
21: CC3 (SOFTWARE)
22: CC4 (SOFTWARE)
23: CC5 (SOFTWARE)
24: CC6 (SOFTWARE)
25: CC7 (SOFTWARE)
26: CC8 (SOFTWARE)
27: CC9 (SOFTWARE)
28: DC1 (SOFTWARE)
29: DC2 (SOFTWARE)
30: DC3 (SOFTWARE)
31: DC4 (SOFTWARE)
32: DC5 (SOFTWARE)
33: DC6 (SOFTWARE)
34: DC7 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
CYS A:113 , CYS A:172 , CYS A:422 , CL A:597 , HOH A:2005
BINDING SITE FOR RESIDUE CD A 594
02
AC2
SOFTWARE
CYS A:172 , HIS A:453 , CL A:597 , CL A:598 , HOH A:2026 , HOH A:2092
BINDING SITE FOR RESIDUE CD A 595
03
AC3
SOFTWARE
CYS A:113 , HIS A:148 , SER A:420 , HOH A:2297 , HOH A:3025
BINDING SITE FOR RESIDUE CD A 596
04
AC4
SOFTWARE
CYS B:1113 , CYS B:1172 , SER B:1420 , CYS B:1422 , CD B:1595 , CL B:1597 , HOH B:2004
BINDING SITE FOR RESIDUE CD B 1594
05
AC5
SOFTWARE
CYS B:1172 , HIS B:1453 , CD B:1594 , CL B:1597 , CL B:1598 , HOH B:2003
BINDING SITE FOR RESIDUE CD B 1595
06
AC6
SOFTWARE
CYS B:1113 , HIS B:1148 , SER B:1420 , CL B:1599 , HOH B:2333
BINDING SITE FOR RESIDUE CD B 1596
07
AC7
SOFTWARE
ASP A:320 , HOH A:3026 , CL A:4000 , HIS B:1585 , HIS B:1587
BINDING SITE FOR RESIDUE CD A 600
08
AC8
SOFTWARE
HIS A:585 , HIS A:588 , HOH A:2010 , HOH A:2019 , HOH A:2029 , HOH A:2034
BINDING SITE FOR RESIDUE CD A 601
09
AC9
SOFTWARE
HIS A:584 , HIS A:586 , GLU B:1326 , HOH B:2009
BINDING SITE FOR RESIDUE CD A 602
10
BC1
SOFTWARE
GLU A:168 , HIS A:397 , HOH A:2120 , HOH A:2160
BINDING SITE FOR RESIDUE CD A 603
11
BC2
SOFTWARE
ASP A:386 , HIS A:388 , ASP B:1386 , HIS B:1388
BINDING SITE FOR RESIDUE CD A 604
12
BC3
SOFTWARE
GLU A:515 , HIS A:520 , HOH A:2152
BINDING SITE FOR RESIDUE CD A 605
13
BC4
SOFTWARE
HIS A:587 , HIS A:589 , ASP B:1321 , HIS B:1588 , HOH B:2199
BINDING SITE FOR RESIDUE CD B 1601
14
BC5
SOFTWARE
GLU A:326 , HIS B:1584 , HIS B:1586 , HOH B:2051
BINDING SITE FOR RESIDUE CD B 1602
15
BC6
SOFTWARE
GLU B:1168 , HIS B:1397
BINDING SITE FOR RESIDUE CD B 1603
16
BC7
SOFTWARE
HIS B:1589 , HOH B:2033 , HOH B:3031
BINDING SITE FOR RESIDUE CD B 1607
17
BC8
SOFTWARE
GLU B:1515 , HIS B:1520 , CL B:4001
BINDING SITE FOR RESIDUE CD B 1608
18
BC9
SOFTWARE
GLY A:111 , ALA A:112 , CYS A:113 , CYS A:172 , HIS A:453 , CD A:594 , CD A:595 , CL A:598
BINDING SITE FOR RESIDUE CL A 597
19
CC1
SOFTWARE
GLN A:108 , GLY A:111 , THR A:114 , CD A:595 , CL A:597
BINDING SITE FOR RESIDUE CL A 598
20
CC2
SOFTWARE
ALA B:1112 , CYS B:1113 , CYS B:1172 , HIS B:1453 , CD B:1594 , CD B:1595 , CL B:1598
BINDING SITE FOR RESIDUE CL B 1597
21
CC3
SOFTWARE
GLN B:1108 , GLY B:1111 , THR B:1114 , HIS B:1453 , CD B:1595 , CL B:1597 , HOH B:2003
BINDING SITE FOR RESIDUE CL B 1598
22
CC4
SOFTWARE
CYS B:1113 , ILE B:1117 , CD B:1596 , HOH B:2333
BINDING SITE FOR RESIDUE CL B 1599
23
CC5
SOFTWARE
ASP A:320 , HIS A:585 , HIS A:587 , CD A:600 , HIS B:1585 , HIS B:1587
BINDING SITE FOR RESIDUE CL A 4000
24
CC6
SOFTWARE
GLU B:1515 , CD B:1608 , HOH B:2195 , HOH B:3029
BINDING SITE FOR RESIDUE CL B 4001
25
CC7
SOFTWARE
THR A:22 , ASP A:45 , ADP A:590 , HOH A:2164 , HOH A:2260 , HOH A:2309
BINDING SITE FOR RESIDUE MG A 592
26
CC8
SOFTWARE
THR A:341 , ASP A:447 , ATP A:591 , HOH A:2083 , HOH A:2175 , HOH A:2323
BINDING SITE FOR RESIDUE MG A 593
27
CC9
SOFTWARE
THR B:1022 , ASP B:1045 , ADP B:1590 , HOH B:2007 , HOH B:2012 , HOH B:2236
BINDING SITE FOR RESIDUE MG B 1592
28
DC1
SOFTWARE
THR B:1341 , ATP B:1591 , HOH B:2073 , HOH B:2102 , HOH B:2209
BINDING SITE FOR RESIDUE MG B 1593
29
DC2
SOFTWARE
GLY A:18 , VAL A:19 , GLY A:20 , LYS A:21 , THR A:22 , SER A:23 , ASN A:235 , GLY A:236 , PHE A:276 , LEU A:277 , GLN A:278 , ASN A:281 , MET A:282 , THR A:501 , THR A:502 , ARG A:543 , MG A:592 , TAS A:701 , HOH A:2065 , HOH A:2100 , HOH A:2157 , HOH A:2164 , HOH A:2260 , HOH A:2309
BINDING SITE FOR RESIDUE ADP A 590
30
DC3
SOFTWARE
GLY B:1018 , VAL B:1019 , GLY B:1020 , LYS B:1021 , THR B:1022 , SER B:1023 , ASN B:1235 , GLY B:1236 , PHE B:1276 , LEU B:1277 , GLN B:1278 , ASN B:1281 , MET B:1282 , THR B:1501 , THR B:1502 , ARG B:1543 , MG B:1592 , TAS B:1701 , HOH B:2007 , HOH B:2012 , HOH B:2236
BINDING SITE FOR RESIDUE ADP B 1590
31
DC4
SOFTWARE
GLN A:208 , GLY A:336 , GLY A:337 , VAL A:338 , GLY A:339 , LYS A:340 , THR A:341 , THR A:342 , ASN A:527 , ASN A:528 , PRO A:566 , LEU A:568 , PRO A:572 , LEU A:581 , MG A:593 , HOH A:2042 , HOH A:2083 , HOH A:2171 , HOH A:2175 , HOH A:2323
BINDING SITE FOR RESIDUE ATP A 591
32
DC5
SOFTWARE
GLY B:1336 , GLY B:1337 , VAL B:1338 , GLY B:1339 , LYS B:1340 , THR B:1341 , THR B:1342 , ASN B:1527 , ASN B:1528 , PRO B:1566 , LEU B:1568 , GLU B:1571 , PRO B:1572 , MG B:1593 , HOH B:2073 , HOH B:2102 , HOH B:2193 , HOH B:2209
BINDING SITE FOR RESIDUE ATP B 1591
33
DC6
SOFTWARE
ARG A:206 , LEU A:277 , GLU A:500 , ARG A:543 , ADP A:590
BINDING SITE FOR RESIDUE TAS A 701
34
DC7
SOFTWARE
ARG B:1206 , GLU B:1500 , ARG B:1543 , ADP B:1590
BINDING SITE FOR RESIDUE TAS B 1701
[
close Site info
]
SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
View:
Select:
Label:
Sorry, no Info available
[
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]
PROSITE Patterns/Profiles
(0, 0)
Info
All PROSITE Patterns/Profiles
;
View:
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Label:
End label:
Sorry, no Info available
[
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]
Exons
(0, 0)
Info
All Exons
View:
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All Exon Boundaries
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 4)
Info
All SCOP Domains
1a: SCOP_d1ii0a1 (A:1-296)
1b: SCOP_d1ii0a2 (A:309-589)
1c: SCOP_d1ii0b1 (B:1001-1296)
1d: SCOP_d1ii0b2 (B:1307-1589)
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Classes
(
)
(
)
Folds
(
)
(
)
Superfamilies
(
)
(
)
Families
(
)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
P-loop containing nucleoside triphosphate hydrolases
(2083)
Superfamily
:
P-loop containing nucleoside triphosphate hydrolases
(2083)
Family
:
Nitrogenase iron protein-like
(152)
Protein domain
:
Arsenite-translocating ATPase ArsA
(4)
Escherichia coli [TaxId: 562]
(4)
1a
d1ii0a1
A:1-296
1b
d1ii0a2
A:309-589
1c
d1ii0b1
B:1001-1296
1d
d1ii0b2
B:1307-1589
[
close SCOP info
]
CATH Domains
(1, 4)
Info
all CATH domains
1a: CATH_1ii0A01 (A:309-583)
1b: CATH_1ii0A02 (A:1-296)
1c: CATH_1ii0B02 (B:1001-1296)
1d: CATH_1ii0B01 (B:1309-1583)
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(
)
(
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(
)
Topologies
(
)
(
)
Homologous Superfamilies
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Rossmann fold
(7312)
Homologous Superfamily
:
P-loop containing nucleotide triphosphate hydrolases
(1378)
Escherichia coli. Organism_taxid: 562.
(54)
1a
1ii0A01
A:309-583
1b
1ii0A02
A:1-296
1c
1ii0B02
B:1001-1296
1d
1ii0B01
B:1309-1583
[
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]
Pfam Domains
(0, 0)
Info
all PFAM domains
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Sorry, no Info available
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