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1IHK
Asym. Unit
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Asym.Unit (32 KB)
Biol.Unit 1 (56 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF FIBROBLAST GROWTH FACTOR 9 (FGF9)
Authors
:
A. N. Plotnikov, A. V. Eliseenkova, O. A. Ibrahimi, M. A. Lemmon, M. Mohammadi
Date
:
19 Apr 01 (Deposition) - 02 May 01 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.20
Chains
:
Asym. Unit : A
Biol. Unit 1: A (2x)
Keywords
:
B-Trefoil Fold, Hormone/Growth Factor Complex
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
A. N. Plotnikov, A. V. Eliseenkova, O. A. Ibrahimi, Z. Shriver, R. Sasisekharan, M. A. Lemmon, M. Mohammadi
Crystal Structure Of Fibroblast Growth Factor 9 Reveals Regions Implicated In Dimerization And Autoinhibition.
J. Biol. Chem. V. 276 4322 2001
(for further references see the
PDB file header
)
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Hetero Components
(1, 2)
Info
All Hetero Components
1a: PHOSPHATE ION (PO4a)
1b: PHOSPHATE ION (PO4b)
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Label:
No.
Name
Count
Type
Full Name
1
PO4
2
Ligand/Ion
PHOSPHATE ION
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Sites
(2, 2)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ARG A:173 , ARG A:177
BINDING SITE FOR RESIDUE PO4 A 300
2
AC2
SOFTWARE
ARG A:160 , ARG A:161 , TYR A:163 , ARG A:180 , HOH A:1035
BINDING SITE FOR RESIDUE PO4 A 301
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SAPs(SNPs)/Variants
(2, 2)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_020944 (I94V, chain A, )
2: VAR_063254 (S99N, chain A, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_020944
I
94
V
FGF9_HUMAN
Polymorphism
12427696
A
I
94
V
2
UniProt
VAR_063254
S
99
N
FGF9_HUMAN
Disease (SYNS3)
---
A
S
99
N
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: HBGF_FGF (A:122-145)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
HBGF_FGF
PS00247
HBGF/FGF family signature.
FGF9_HUMAN
122-145
1
A:122-145
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Exons
(3, 3)
Info
All Exons
Exon 1.1 (A:52-93)
Exon 1.3a (A:93-127)
Exon 1.4c (A:128-208)
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All Exon Boundaries
1: Boundary -/1.1
2: Boundary 1.1/1.3a
3: Boundary 1.3a/1.4c
4: Boundary 1.4c/-
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENST00000382353
1
ENSE00001491832
chr13:
22245522-22246328
807
FGF9_HUMAN
1-93
93
1
A:52-93
42
1.3a
ENST00000382353
3a
ENSE00000678905
chr13:
22255181-22255284
104
FGF9_HUMAN
93-127
35
1
A:93-127
35
1.4c
ENST00000382353
4c
ENSE00001491824
chr13:
22275329-22278637
3309
FGF9_HUMAN
128-208
81
1
A:128-208
81
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d1ihka_ (A:)
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)
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)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All beta proteins
(24004)
Fold
:
beta-Trefoil
(385)
Superfamily
:
Cytokine
(169)
Family
:
Fibroblast growth factors (FGF)
(120)
Protein domain
:
Fibroblast growth factor 9, FGF9
(2)
Human (Homo sapiens) [TaxId: 9606]
(2)
1a
d1ihka_
A:
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CATH Domains
(1, 1)
Info
all CATH domains
1a: CATH_1ihkA00 (A:52-208)
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Organisms
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Class
:
Mainly Beta
(13760)
Architecture
:
Trefoil
(289)
Topology
:
Trefoil (Acidic Fibroblast Growth Factor, subunit A)
(289)
Homologous Superfamily
:
[code=2.80.10.50, no name defined]
(289)
Human (Homo sapiens)
(131)
1a
1ihkA00
A:52-208
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Pfam Domains
(0, 0)
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all PFAM domains
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