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1I36
Biol. Unit 1
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Asym.Unit (96 KB)
Biol.Unit 1 (91 KB)
Biol.Unit 2 (180 KB)
Biol.Unit 3 (180 KB)
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(1)
Title
:
STRUCTURE OF CONSERVED PROTEIN MTH1747 OF UNKNOWN FUNCTION REVEALS STRUCTURAL SIMILARITY WITH 3-HYDROXYACID DEHYDROGENASES
Authors
:
S. V. Korolev, I. S. Dementieva, D. Christendat, A. Edwards, A. Joachimiak, Midwest Center For Structural Genomics (Mcsg)
Date
:
13 Feb 01 (Deposition) - 15 May 02 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.00
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Biol. Unit 2: A,B (2x)
Biol. Unit 3: A,B (2x)
Keywords
:
Nadp Binding Domain, Protein Nadp Complex, Structural Genomics, Psi, Protein Structure Initiative, Midwest Center For Structural Genomics, Mcsg, Unknown Function
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
S. V. Korolev, I. S. Dementieva, D. Christendat, A. Edwards, A. Joachimiak
Structural Similarities Of Mth1747 Hypothetical Protein From Methanobacterium Thermoautotrophicum With 3-Hydroxyacid Dehydrogenases
To Be Published
(for further references see the
PDB file header
)
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Hetero Components
(1, 2)
Info
All Hetero Components
1a: NADP NICOTINAMIDE-ADENINE-DINUCLEO... (NAPa)
1b: NADP NICOTINAMIDE-ADENINE-DINUCLEO... (NAPb)
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No.
Name
Count
Type
Full Name
1
NAP
2
Ligand/Ion
NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
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Sites
(2, 2)
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All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
GLY A:7 , PHE A:8 , GLY A:9 , GLU A:10 , VAL A:11 , ARG A:33 , SER A:34 , THR A:37 , ALA A:63 , VAL A:64 , PRO A:66 , VAL A:68 , ARG A:75 , ILE A:87 , ASN A:88 , ASN A:89 , VAL A:116 , HOH A:1365 , HOH A:1433 , HOH A:1442 , HOH A:1445 , HOH A:1472 , HOH A:1486 , HOH A:1503 , HOH A:1515 , HOH A:1551
BINDING SITE FOR RESIDUE NAP A 1350
2
AC2
SOFTWARE
GLY B:7 , GLY B:9 , GLU B:10 , VAL B:11 , ARG B:33 , SER B:34 , THR B:37 , ALA B:63 , VAL B:64 , PRO B:66 , VAL B:68 , ARG B:75 , ILE B:87 , ASN B:88 , ASN B:89 , VAL B:116 , HOH B:1752 , HOH B:1770 , HOH B:1905 , HOH B:1951
BINDING SITE FOR RESIDUE NAP B 1750
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
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Exons
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(2, 4)
Info
All SCOP Domains
1a: SCOP_d1i36a1 (A:153-264)
1b: SCOP_d1i36b1 (B:153-264)
2a: SCOP_d1i36a2 (A:1-152)
2b: SCOP_d1i36b2 (B:1-152)
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Class
:
All alpha proteins
(14657)
Fold
:
6-phosphogluconate dehydrogenase C-terminal domain-like
(119)
Superfamily
:
6-phosphogluconate dehydrogenase C-terminal domain-like
(119)
Family
:
Conserved hypothetical protein MTH1747
(1)
Protein domain
:
Conserved hypothetical protein MTH1747
(1)
Methanobacterium thermoautotrophicum [TaxId: 145262]
(1)
1a
d1i36a1
A:153-264
1b
d1i36b1
B:153-264
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
NAD(P)-binding Rossmann-fold domains
(1604)
Superfamily
:
NAD(P)-binding Rossmann-fold domains
(1604)
Family
:
6-phosphogluconate dehydrogenase-like, N-terminal domain
(69)
Protein domain
:
Conserved hypothetical protein MTH1747
(1)
Methanobacterium thermoautotrophicum [TaxId: 145262]
(1)
2a
d1i36a2
A:1-152
2b
d1i36b2
B:1-152
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CATH Domains
(2, 4)
Info
all CATH domains
1a: CATH_1i36A01 (A:1-159)
1b: CATH_1i36B01 (B:1-159)
2a: CATH_1i36A02 (A:160-264)
2b: CATH_1i36B02 (B:160-264)
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Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Rossmann fold
(7312)
Homologous Superfamily
:
NAD(P)-binding Rossmann-like Domain
(1244)
Methanothermobacter thermautotrophicus. Organism_taxid: 145262.
(5)
1a
1i36A01
A:1-159
1b
1i36B01
B:1-159
Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2
(60)
Homologous Superfamily
:
N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2
(59)
Methanothermobacter thermautotrophicus. Organism_taxid: 145262.
(1)
2a
1i36A02
A:160-264
2b
1i36B02
B:160-264
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Pfam Domains
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Asymmetric Unit 1
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Asym.Unit (96 KB)
Header - Asym.Unit
Biol.Unit 1 (91 KB)
Header - Biol.Unit 1
Biol.Unit 2 (180 KB)
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Biol.Unit 3 (180 KB)
Header - Biol.Unit 3
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