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Getting 'Hetero Component' information from database.
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Getting 'Exon' information from database.
1HW8
Asym. Unit
Info
Asym.Unit (249 KB)
Biol.Unit 1 (241 KB)
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(1)
Title
:
COMPLEX OF THE CATALYTIC PORTION OF HUMAN HMG-COA REDUCTASE WITH COMPACTIN (ALSO KNOWN AS MEVASTATIN)
Authors
:
E. S. Istvan, J. Deisenhofer
Date
:
09 Jan 01 (Deposition) - 11 May 01 (Release) - 12 Mar 14 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.10
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,B,C,D (1x)
Keywords
:
Protein-Inhibitor Complex, Oxidoreductase
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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)
Reference
:
E. S. Istvan, J. Deisenhofer
Structural Mechanism For Statin Inhibition Of Hmg-Coa Reductase.
Science V. 292 1160 2001
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Hetero Components
(2, 6)
Info
All Hetero Components
1a: (3R,5R)-3,5-DIHYDROXY-7-[(1S,2S,8S... (114a)
1b: (3R,5R)-3,5-DIHYDROXY-7-[(1S,2S,8S... (114b)
1c: (3R,5R)-3,5-DIHYDROXY-7-[(1S,2S,8S... (114c)
1d: (3R,5R)-3,5-DIHYDROXY-7-[(1S,2S,8S... (114d)
2a: ADENOSINE-5'-DIPHOSPHATE (ADPa)
2b: ADENOSINE-5'-DIPHOSPHATE (ADPb)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
114
4
Ligand/Ion
(3R,5R)-3,5-DIHYDROXY-7-[(1S,2S,8S,8AR)-2-METHYL-8-{[(2S)-2-METHYLBUTANOYL]OXY}-1,2,6,7,8,8A-HEXAHYDRONAPHTHALEN-1-YL]HEPTANOIC ACID
2
ADP
2
Ligand/Ion
ADENOSINE-5'-DIPHOSPHATE
[
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Sites
(6, 6)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
GLU A:559 , SER A:565 , LYS A:735 , ALA A:751 , ASN A:755 , ARG B:590 , MET B:657 , SER B:661 , SER B:684 , ASN B:686 , ASP B:690 , LYS B:691 , LYS B:692 , HOH B:1014
BINDING SITE FOR RESIDUE 114 B 1
2
AC2
SOFTWARE
ARG A:590 , MET A:657 , VAL A:683 , SER A:684 , ASN A:686 , ASP A:690 , LYS A:691 , LYS A:692 , HOH A:1003 , HOH A:1268 , GLU B:559 , SER B:565 , LYS B:735 , ALA B:751 , ASN B:755
BINDING SITE FOR RESIDUE 114 A 2
3
AC3
SOFTWARE
GLU C:559 , SER C:565 , LYS C:735 , ALA C:751 , ASN C:755 , ARG D:590 , VAL D:683 , SER D:684 , ASP D:690 , LYS D:691 , LYS D:692 , HOH D:1004
BINDING SITE FOR RESIDUE 114 D 3
4
AC4
SOFTWARE
ARG C:590 , VAL C:683 , SER C:684 , ASN C:686 , ASP C:690 , LYS C:691 , LYS C:692 , HOH C:1010 , GLU D:559 , LEU D:562 , SER D:565 , LYS D:735 , ALA D:751 , ASN D:755
BINDING SITE FOR RESIDUE 114 C 4
5
AC5
SOFTWARE
TYR A:479 , ASN A:529 , ALA B:564 , ASN B:567 , ARG B:568 , LYS B:722
BINDING SITE FOR RESIDUE ADP B 101
6
AC6
SOFTWARE
PHE D:628 , SER D:651 , GLY D:652 , ASP D:653 , ALA D:654 , GLY D:656 , MET D:657 , ASN D:658 , MET D:659 , VAL D:805 , GLY D:806 , GLY D:807 , ALA D:826 , HOH D:1086 , HOH D:1287
BINDING SITE FOR RESIDUE ADP D 102
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SAPs(SNPs)/Variants
(1, 4)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_011954 (I638V, chain A/B/C/D, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_011954
I
638
V
HMDH_HUMAN
Polymorphism
5908
A/B/C/D
I
638
V
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
[
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]
PROSITE Patterns/Profiles
(4, 14)
Info
All PROSITE Patterns/Profiles
1: HMG_COA_REDUCTASE_4 (A:464-861,B:464-860)
2: HMG_COA_REDUCTASE_1 (A:646-660,B:646-660,C:646-660,D:64...)
3: HMG_COA_REDUCTASE_2 (A:802-809,B:802-809,C:802-809,D:80...)
4: HMG_COA_REDUCTASE_3 (A:856-861,B:856-860,C:856-860,D:85...)
;
View:
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Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
HMG_COA_REDUCTASE_4
PS50065
Hydroxymethylglutaryl-coenzyme A reductases family profile.
HMDH_HUMAN
464-871
2
A:464-861
B:464-860
2
HMG_COA_REDUCTASE_1
PS00066
Hydroxymethylglutaryl-coenzyme A reductases signature 1.
HMDH_HUMAN
646-660
4
A:646-660
B:646-660
C:646-660
D:646-660
3
HMG_COA_REDUCTASE_2
PS00318
Hydroxymethylglutaryl-coenzyme A reductases signature 2.
HMDH_HUMAN
802-809
4
A:802-809
B:802-809
C:802-809
D:802-809
4
HMG_COA_REDUCTASE_3
PS01192
Hydroxymethylglutaryl-coenzyme A reductases signature 3.
HMDH_HUMAN
856-869
4
A:856-861
B:856-860
C:856-860
D:856-859
[
close PROSITE info
]
Exons
(9, 34)
Info
All Exons
Exon 1.13c (A:441-448 | B:443-451 | - | -)
Exon 1.14c (A:462-521 (gaps) | B:460-521 | C:4...)
Exon 1.15b (A:522-574 | B:522-574 | C:522-574 ...)
Exon 1.15d (A:575-627 | B:575-627 | C:575-627 ...)
Exon 1.16a (A:627-662 | B:627-662 | C:627-662 ...)
Exon 1.17b (A:663-719 | B:663-719 | C:663-719 ...)
Exon 1.18a (A:720-766 | B:720-766 | C:720-766 ...)
Exon 1.19a (A:767-819 | B:767-819 | C:767-819 ...)
Exon 1.20b (A:820-861 | B:820-860 | C:820-860 ...)
View:
Select:
Label:
All Exon Boundaries
01: Boundary 1.13a/1.13c
02: Boundary 1.13c/1.14c
03: Boundary 1.14c/1.15b
04: Boundary 1.15b/1.15d
05: Boundary 1.15d/1.16a
06: Boundary 1.16a/1.17b
07: Boundary 1.17b/1.18a
08: Boundary 1.18a/1.19a
09: Boundary 1.19a/1.20b
10: Boundary 1.20b/1.21g
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.2a
ENST00000287936
2a
ENSE00001378703
chr5:
74632993-74633125
133
HMDH_HUMAN
-
0
0
-
-
1.5b
ENST00000287936
5b
ENSE00002182886
chr5:
74638408-74638595
188
HMDH_HUMAN
1-55
55
0
-
-
1.6a
ENST00000287936
6a
ENSE00000753569
chr5:
74639678-74639789
112
HMDH_HUMAN
56-93
38
0
-
-
1.7b
ENST00000287936
7b
ENSE00000753572
chr5:
74640070-74640157
88
HMDH_HUMAN
93-122
30
0
-
-
1.8
ENST00000287936
8
ENSE00000753575
chr5:
74641399-74641483
85
HMDH_HUMAN
122-150
29
0
-
-
1.9
ENST00000287936
9
ENSE00000753578
chr5:
74643029-74643134
106
HMDH_HUMAN
151-186
36
0
-
-
1.10b
ENST00000287936
10b
ENSE00000753581
chr5:
74645867-74645973
107
HMDH_HUMAN
186-221
36
0
-
-
1.11
ENST00000287936
11
ENSE00000753584
chr5:
74646083-74646199
117
HMDH_HUMAN
222-260
39
0
-
-
1.12
ENST00000287936
12
ENSE00000753587
chr5:
74646614-74646774
161
HMDH_HUMAN
261-314
54
0
-
-
1.13a
ENST00000287936
13a
ENSE00000753589
chr5:
74646893-74647140
248
HMDH_HUMAN
314-397
84
0
-
-
1.13c
ENST00000287936
13c
ENSE00000753591
chr5:
74647249-74647427
179
HMDH_HUMAN
397-456
60
2
A:441-448
B:443-451
-
-
8
9
-
-
1.14c
ENST00000287936
14c
ENSE00000753593
chr5:
74650328-74650522
195
HMDH_HUMAN
457-521
65
4
A:462-521 (gaps)
B:460-521
C:488-521
D:488-521
60
62
34
34
1.15b
ENST00000287936
15b
ENSE00000753595
chr5:
74650881-74651039
159
HMDH_HUMAN
522-574
53
4
A:522-574
B:522-574
C:522-574
D:522-574
53
53
53
53
1.15d
ENST00000287936
15d
ENSE00000753597
chr5:
74651190-74651347
158
HMDH_HUMAN
575-627
53
4
A:575-627
B:575-627
C:575-627
D:575-627
53
53
53
53
1.16a
ENST00000287936
16a
ENSE00000753599
chr5:
74652168-74652273
106
HMDH_HUMAN
627-662
36
4
A:627-662
B:627-662
C:627-662
D:627-662
36
36
36
36
1.17b
ENST00000287936
17b
ENSE00000753601
chr5:
74654482-74654652
171
HMDH_HUMAN
663-719
57
4
A:663-719
B:663-719
C:663-719
D:663-719
57
57
57
57
1.18a
ENST00000287936
18a
ENSE00000753603
chr5:
74654995-74655135
141
HMDH_HUMAN
720-766
47
4
A:720-766
B:720-766
C:720-766
D:720-766
47
47
47
47
1.19a
ENST00000287936
19a
ENSE00000753605
chr5:
74655223-74655381
159
HMDH_HUMAN
767-819
53
4
A:767-819
B:767-819
C:767-819
D:767-819
53
53
53
53
1.20b
ENST00000287936
20b
ENSE00000753607
chr5:
74655810-74655964
155
HMDH_HUMAN
820-871
52
4
A:820-861
B:820-860
C:820-860
D:820-859
42
41
41
40
1.21g
ENST00000287936
21g
ENSE00001859900
chr5:
74656113-74657929
1817
HMDH_HUMAN
871-888
18
0
-
-
[
close EXON info
]
SCOP Domains
(2, 8)
Info
All SCOP Domains
1a: SCOP_d1hw8a1 (A:587-703)
1b: SCOP_d1hw8b1 (B:587-703)
1c: SCOP_d1hw8c1 (C:587-703)
1d: SCOP_d1hw8d1 (D:587-703)
2a: SCOP_d1hw8a2 (A:441-586,A:704-861)
2b: SCOP_d1hw8b2 (B:443-586,B:704-860)
2c: SCOP_d1hw8c2 (C:488-586,C:704-860)
2d: SCOP_d1hw8d2 (D:488-586,D:704-859)
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)
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(
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(
)
(
)
Families
(
)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Ferredoxin-like
(1795)
Superfamily
:
NAD-binding domain of HMG-CoA reductase
(20)
Family
:
NAD-binding domain of HMG-CoA reductase
(20)
Protein domain
:
NAD-binding domain of HMG-CoA reductase
(20)
Human (Homo sapiens) [TaxId: 9606]
(9)
1a
d1hw8a1
A:587-703
1b
d1hw8b1
B:587-703
1c
d1hw8c1
C:587-703
1d
d1hw8d1
D:587-703
Fold
:
Substrate-binding domain of HMG-CoA reductase
(20)
Superfamily
:
Substrate-binding domain of HMG-CoA reductase
(20)
Family
:
Substrate-binding domain of HMG-CoA reductase
(20)
Protein domain
:
Substrate-binding domain of HMG-CoA reductase
(20)
Human (Homo sapiens) [TaxId: 9606]
(9)
2a
d1hw8a2
A:441-586,A:704-861
2b
d1hw8b2
B:443-586,B:704-860
2c
d1hw8c2
C:488-586,C:704-860
2d
d1hw8d2
D:488-586,D:704-859
[
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CATH Domains
(3, 12)
Info
all CATH domains
1a: CATH_1hw8A03 (A:587-703)
1b: CATH_1hw8B03 (B:587-703)
1c: CATH_1hw8C03 (C:587-703)
1d: CATH_1hw8D03 (D:587-703)
2a: CATH_1hw8C02 (C:537-585,C:704-860)
2b: CATH_1hw8A02 (A:537-585,A:704-859)
2c: CATH_1hw8B02 (B:537-585,B:704-859)
2d: CATH_1hw8D02 (D:537-585,D:704-859)
3a: CATH_1hw8B01 (B:462-536)
3b: CATH_1hw8A01 (A:462-536)
3c: CATH_1hw8C01 (C:488-536)
3d: CATH_1hw8D01 (D:488-536)
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)
Homologous Superfamilies
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
2-Layer Sandwich
(8480)
Topology
:
Alpha-Beta Plaits
(1688)
Homologous Superfamily
:
[code=3.30.70.420, no name defined]
(27)
Human (Homo sapiens)
(22)
1a
1hw8A03
A:587-703
1b
1hw8B03
B:587-703
1c
1hw8C03
C:587-703
1d
1hw8D03
D:587-703
Architecture
:
Alpha-Beta Complex
(3881)
Topology
:
3-hydroxy-3-methylglutaryl-coenzyme A Reductase; Chain A, domain 2
(27)
Homologous Superfamily
:
3-hydroxy-3-methylglutaryl-coenzyme A Reductase; Chain A, domain 2
(27)
Human (Homo sapiens)
(22)
2a
1hw8C02
C:537-585,C:704-860
2b
1hw8A02
A:537-585,A:704-859
2c
1hw8B02
B:537-585,B:704-859
2d
1hw8D02
D:537-585,D:704-859
Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
HMGR, N-terminal domain
(22)
Homologous Superfamily
:
HMGR, N-terminal domain
(22)
Human (Homo sapiens)
(22)
3a
1hw8B01
B:462-536
3b
1hw8A01
A:462-536
3c
1hw8C01
C:488-536
3d
1hw8D01
D:488-536
[
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Pfam Domains
(0, 0)
Info
all PFAM domains
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