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Getting 'Biological Unit' information from database.
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Getting 'Hetero Component' information from database.
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1HT8
Asym. Unit
Info
Asym.Unit (198 KB)
Biol.Unit 1 (191 KB)
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(1)
Title
:
THE 2.7 ANGSTROM RESOLUTION MODEL OF OVINE COX-1 COMPLEXED WITH ALCLOFENAC
Authors
:
B. S. Selinsky, K. Gupta, C. T. Sharkey, P. J. Loll
Date
:
29 Dec 00 (Deposition) - 11 Apr 01 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.69
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Membrane Protein, Peroxidase, Dioxygenase, Oxidoreductase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
B. S. Selinsky, K. Gupta, C. T. Sharkey, P. J. Loll
Structural Analysis Of Nsaid Binding By Prostaglandin H2 Synthase: Time-Dependent And Time-Independent Inhibitors Elicit Identical Enzyme Conformations.
Biochemistry V. 40 5172 2001
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close entry info
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Hetero Components
(4, 15)
Info
All Hetero Components
1a: (3-CHLORO-4-PROPOXY-PHENYL)-ACETIC... (34Ca)
1b: (3-CHLORO-4-PROPOXY-PHENYL)-ACETIC... (34Cb)
2a: B-OCTYLGLUCOSIDE (BOGa)
2b: B-OCTYLGLUCOSIDE (BOGb)
2c: B-OCTYLGLUCOSIDE (BOGc)
3a: PROTOPORPHYRIN IX CONTAINING FE (HEMa)
3b: PROTOPORPHYRIN IX CONTAINING FE (HEMb)
4a: N-ACETYL-D-GLUCOSAMINE (NAGa)
4b: N-ACETYL-D-GLUCOSAMINE (NAGb)
4c: N-ACETYL-D-GLUCOSAMINE (NAGc)
4d: N-ACETYL-D-GLUCOSAMINE (NAGd)
4e: N-ACETYL-D-GLUCOSAMINE (NAGe)
4f: N-ACETYL-D-GLUCOSAMINE (NAGf)
4g: N-ACETYL-D-GLUCOSAMINE (NAGg)
4h: N-ACETYL-D-GLUCOSAMINE (NAGh)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
34C
2
Ligand/Ion
(3-CHLORO-4-PROPOXY-PHENYL)-ACETIC ACID
2
BOG
3
Ligand/Ion
B-OCTYLGLUCOSIDE
3
HEM
2
Ligand/Ion
PROTOPORPHYRIN IX CONTAINING FE
4
NAG
8
Ligand/Ion
N-ACETYL-D-GLUCOSAMINE
[
close Hetero Component info
]
Sites
(15, 15)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
TYR A:55 , ASN A:68
BINDING SITE FOR RESIDUE NAG A 1661
02
AC2
SOFTWARE
ASN A:144 , TYR A:147 , NAG A:1672 , HOH A:1815 , HOH A:1835 , HOH A:1872 , HOH A:1917
BINDING SITE FOR RESIDUE NAG A 1671
03
AC3
SOFTWARE
NAG A:1671
BINDING SITE FOR RESIDUE NAG A 1672
04
AC4
SOFTWARE
GLN A:406 , ASN A:410 , HOH A:1803 , HOH A:1807 , HOH A:1819 , GLN B:282
BINDING SITE FOR RESIDUE NAG A 1681
05
AC5
SOFTWARE
ARG A:83 , PRO A:84 , PRO A:86 , VAL A:116 , VAL A:119 , ARG A:120 , GLU A:524
BINDING SITE FOR RESIDUE BOG A 1802
06
AC6
SOFTWARE
THR A:70 , TRP A:77 , TRP B:98 , LEU B:99 , PHE B:102 , VAL B:103
BINDING SITE FOR RESIDUE BOG A 1801
07
AC7
SOFTWARE
TYR B:55 , ASN B:68
BINDING SITE FOR RESIDUE NAG B 2661
08
AC8
SOFTWARE
GLU B:140 , ASN B:144 , TYR B:147 , NAG B:2672 , HOH B:2809 , HOH B:2848 , HOH B:2893 , HOH B:2911
BINDING SITE FOR RESIDUE NAG B 2671
09
AC9
SOFTWARE
MET B:216 , NAG B:2671 , HOH B:2914
BINDING SITE FOR RESIDUE NAG B 2672
10
BC1
SOFTWARE
ILE A:279 , PRO A:280 , GLN B:406 , ASN B:410 , HOH B:2833 , HOH B:2856
BINDING SITE FOR RESIDUE NAG B 2681
11
BC2
SOFTWARE
ARG B:83 , PRO B:84 , PRO B:86 , VAL B:116 , VAL B:119 , ARG B:120 , GLU B:524 , HOH B:2842
BINDING SITE FOR RESIDUE BOG B 2802
12
BC3
SOFTWARE
ALA A:202 , GLN A:203 , THR A:206 , HIS A:207 , PHE A:210 , THR A:212 , LEU A:295 , ASN A:382 , TYR A:385 , HIS A:386 , TRP A:387 , HIS A:388 , MET A:391 , ILE A:444 , ASP A:450
BINDING SITE FOR RESIDUE HEM A 601
13
BC4
SOFTWARE
VAL A:116 , ARG A:120 , VAL A:349 , TYR A:355 , TRP A:387 , ILE A:523 , ALA A:527 , SER A:530
BINDING SITE FOR RESIDUE 34C A 1701
14
BC5
SOFTWARE
ALA B:202 , GLN B:203 , THR B:206 , HIS B:207 , PHE B:210 , LYS B:211 , THR B:212 , ASN B:382 , TYR B:385 , HIS B:386 , HIS B:388 , MET B:391 , TYR B:404 , ILE B:444 , ASP B:450
BINDING SITE FOR RESIDUE HEM B 601
15
BC6
SOFTWARE
VAL B:116 , ARG B:120 , TYR B:355 , TRP B:387 , ILE B:523 , ALA B:527 , SER B:530
BINDING SITE FOR RESIDUE 34C B 2701
[
close Site info
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SAPs(SNPs)/Variants
(6, 12)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_PGH1_SHEEP_001 (R97H, chain A/B, )
2: VAR_PGH1_SHEEP_002 (G164G, chain A/B, )
3: VAR_PGH1_SHEEP_003 (R456Q, chain A/B, )
4: VAR_PGH1_SHEEP_004 (E520K, chain A/B, )
5: VAR_PGH1_SHEEP_005 (E520Q, chain A/B, )
6: VAR_PGH1_SHEEP_006 (M525I, chain A/B, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_PGH1_SHEEP_001
*
R
97
H
PGH1_SHEEP
---
---
A/B
R
97
H
2
UniProt
VAR_PGH1_SHEEP_002
*
D
164
G
PGH1_SHEEP
---
---
A/B
G
164
G
3
UniProt
VAR_PGH1_SHEEP_003
*
R
456
Q
PGH1_SHEEP
---
---
A/B
R
456
Q
4
UniProt
VAR_PGH1_SHEEP_004
*
E
520
K
PGH1_SHEEP
---
---
A/B
E
520
K
5
UniProt
VAR_PGH1_SHEEP_005
*
E
520
Q
PGH1_SHEEP
---
---
A/B
E
520
Q
6
UniProt
VAR_PGH1_SHEEP_006
*
M
525
I
PGH1_SHEEP
---
---
A/B
M
525
I
* ID not provided by source
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
[
close SNP/Variant info
]
PROSITE Patterns/Profiles
(1, 2)
Info
All PROSITE Patterns/Profiles
1: PEROXIDASE_3 (A:110-583,B:110-583)
;
View:
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Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
PEROXIDASE_3
PS50292
Animal heme peroxidase superfamily profile.
PGH1_SHEEP
110-600
2
A:110-583
B:110-583
[
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Exons
(0, 0)
Info
All Exons
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All Exon Boundaries
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Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(2, 4)
Info
All SCOP Domains
1a: SCOP_d1ht8a1 (A:74-583)
1b: SCOP_d1ht8b1 (B:74-583)
2a: SCOP_d1ht8a2 (A:33-73)
2b: SCOP_d1ht8b2 (B:33-73)
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Folds
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Superfamilies
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)
(
)
Families
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)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All alpha proteins
(14657)
Fold
:
Heme-dependent peroxidases
(402)
Superfamily
:
Heme-dependent peroxidases
(402)
Family
:
Myeloperoxidase-like
(44)
Protein domain
:
Prostaglandin H2 synthase
(34)
Sheep (Ovis aries) [TaxId: 9940]
(23)
1a
d1ht8a1
A:74-583
1b
d1ht8b1
B:74-583
Class
:
Small proteins
(3458)
Fold
:
Knottins (small inhibitors, toxins, lectins)
(761)
Superfamily
:
EGF/Laminin
(347)
Family
:
EGF-type module
(304)
Protein domain
:
Prostaglandin H2 synthase-1, EGF-like module
(34)
Sheep (Ovis aries) [TaxId: 9940]
(23)
2a
d1ht8a2
A:33-73
2b
d1ht8b2
B:33-73
[
close SCOP info
]
CATH Domains
(2, 4)
Info
all CATH domains
1a: CATH_1ht8A02 (A:74-583)
1b: CATH_1ht8B02 (B:74-583)
2a: CATH_1ht8A01 (A:33-73)
2b: CATH_1ht8B01 (B:33-73)
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(
)
(
)
Organisms
(
)
(
)
Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
Myeloperoxidase, subunit C
(39)
Homologous Superfamily
:
Myeloperoxidase, subunit C
(39)
Sheep (Ovis aries)
(18)
1a
1ht8A02
A:74-583
1b
1ht8B02
B:74-583
Class
:
Mainly Beta
(13760)
Architecture
:
Ribbon
(789)
Topology
:
Laminin
(270)
Homologous Superfamily
:
Laminin
(263)
Sheep (Ovis aries)
(18)
2a
1ht8A01
A:33-73
2b
1ht8B01
B:33-73
[
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]
Pfam Domains
(0, 0)
Info
all PFAM domains
View:
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Label:
Sorry, no Info available
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Asymmetric Unit 1
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