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1HSO
Asym. Unit
Info
Asym.Unit (128 KB)
Biol.Unit 1 (123 KB)
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(1)
Title
:
HUMAN ALPHA ALCOHOL DEHYDROGENASE (ADH1A)
Authors
:
M. S. Niederhut, B. J. Gibbons, S. Perez-Miller, T. D. Hurley
Date
:
27 Dec 00 (Deposition) - 10 Jan 01 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.50
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Rossmann Fold, Alcohol Dehydrogenase, Oxidoreductase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. S. Niederhut, B. J. Gibbons, S. Perez-Miller, T. D. Hurley
Three-Dimensional Structures Of The Three Human Class I Alcohol Dehydrogenases.
Protein Sci. V. 10 697 2001
(for further references see the
PDB file header
)
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Hetero Components
(3, 8)
Info
All Hetero Components
1a: NICOTINAMIDE-ADENINE-DINUCLEOTIDE (NADa)
1b: NICOTINAMIDE-ADENINE-DINUCLEOTIDE (NADb)
2a: 4-IODOPYRAZOLE (PYZa)
2b: 4-IODOPYRAZOLE (PYZb)
3a: ZINC ION (ZNa)
3b: ZINC ION (ZNb)
3c: ZINC ION (ZNc)
3d: ZINC ION (ZNd)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
NAD
2
Ligand/Ion
NICOTINAMIDE-ADENINE-DINUCLEOTIDE
2
PYZ
2
Ligand/Ion
4-IODOPYRAZOLE
3
ZN
4
Ligand/Ion
ZINC ION
[
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Sites
(8, 8)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
7: AC7 (SOFTWARE)
8: AC8 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
CYS A:97 , CYS A:100 , CYS A:103 , CYS A:111
BINDING SITE FOR RESIDUE ZN A 1375
2
AC2
SOFTWARE
CYS A:46 , HIS A:67 , CYS A:174 , HOH A:467 , NAD A:1377
BINDING SITE FOR RESIDUE ZN A 1376
3
AC3
SOFTWARE
CYS B:97 , CYS B:100 , CYS B:103 , CYS B:111
BINDING SITE FOR RESIDUE ZN B 2375
4
AC4
SOFTWARE
CYS B:46 , HIS B:67 , CYS B:174 , HOH B:723 , NAD B:2377
BINDING SITE FOR RESIDUE ZN B 2376
5
AC5
SOFTWARE
CYS A:46 , GLY A:47 , THR A:48 , HIS A:51 , CYS A:174 , THR A:178 , GLY A:199 , LEU A:200 , GLY A:201 , GLY A:202 , VAL A:203 , ASP A:223 , ILE A:224 , LYS A:228 , VAL A:268 , ILE A:269 , ARG A:271 , VAL A:292 , GLY A:293 , VAL A:294 , ALA A:317 , ILE A:318 , LEU A:319 , LEU A:362 , ARG A:369 , HOH A:409 , HOH A:420 , HOH A:421 , HOH A:422 , HOH A:467 , HOH A:482 , HOH A:483 , HOH A:541 , HOH A:761 , ZN A:1376 , LEU B:309
BINDING SITE FOR RESIDUE NAD A 1377
6
AC6
SOFTWARE
CYS B:46 , GLY B:47 , THR B:48 , HIS B:51 , CYS B:174 , THR B:178 , GLY B:199 , LEU B:200 , GLY B:201 , GLY B:202 , VAL B:203 , ASP B:223 , ILE B:224 , LYS B:228 , VAL B:268 , ILE B:269 , ARG B:271 , VAL B:292 , GLY B:293 , VAL B:294 , ALA B:317 , ILE B:318 , LEU B:319 , LEU B:362 , ARG B:369 , HOH B:685 , HOH B:686 , HOH B:691 , HOH B:707 , HOH B:781 , HOH B:787 , HOH B:788 , HOH B:790 , ZN B:2376
BINDING SITE FOR RESIDUE NAD B 2377
7
AC7
SOFTWARE
MET A:57 , VAL A:294 , MET B:306
BINDING SITE FOR RESIDUE PYZ A 1378
8
AC8
SOFTWARE
MET A:306 , MET B:57 , VAL B:116 , VAL B:294 , ILE B:318
BINDING SITE FOR RESIDUE PYZ B 2378
[
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
View:
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Label:
Sorry, no Info available
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PROSITE Patterns/Profiles
(1, 2)
Info
All PROSITE Patterns/Profiles
1: ADH_ZINC (A:66-80,B:66-80)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
ADH_ZINC
PS00059
Zinc-containing alcohol dehydrogenases signature.
ADH1A_HUMAN
67-81
2
A:66-80
B:66-80
[
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Exons
(9, 18)
Info
All Exons
Exon 1.1a (A:1-5 | B:1-5)
Exon 1.2 (A:6-39 | B:6-39)
Exon 1.3a (A:40-86 | B:40-86)
Exon 1.4a (A:86-115 | B:86-115)
Exon 1.5a (A:115-188 | B:115-188)
Exon 1.6a (A:189-275 | B:189-275)
Exon 1.7 (A:276-321 | B:276-321)
Exon 1.8 (A:321-367 | B:321-367)
Exon 1.9 (A:367-374 | B:367-374)
View:
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All Exon Boundaries
01: Boundary -/1.1a
02: Boundary 1.1a/1.2
03: Boundary 1.2/1.3a
04: Boundary 1.3a/1.4a
05: Boundary 1.4a/1.5a
06: Boundary 1.5a/1.6a
07: Boundary 1.6a/1.7
08: Boundary 1.7/1.8
09: Boundary 1.8/1.9
10: Boundary 1.9/-
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1a
ENST00000209668
1a
ENSE00001388966
chr4:
100212185-100212054
132
ADH1A_HUMAN
1-6
6
2
A:1-5
B:1-5
5
5
1.2
ENST00000209668
2
ENSE00001681388
chr4:
100208822-100208721
102
ADH1A_HUMAN
7-40
34
2
A:6-39
B:6-39
34
34
1.3a
ENST00000209668
3a
ENSE00001711617
chr4:
100208145-100208007
139
ADH1A_HUMAN
41-87
47
2
A:40-86
B:40-86
47
47
1.4a
ENST00000209668
4a
ENSE00001676195
chr4:
100205960-100205873
88
ADH1A_HUMAN
87-116
30
2
A:86-115
B:86-115
30
30
1.5a
ENST00000209668
5a
ENSE00001612892
chr4:
100205775-100205556
220
ADH1A_HUMAN
116-189
74
2
A:115-188
B:115-188
74
74
1.6a
ENST00000209668
6a
ENSE00001663382
chr4:
100203763-100203503
261
ADH1A_HUMAN
190-276
87
2
A:189-275
B:189-275
87
87
1.7
ENST00000209668
7
ENSE00001739998
chr4:
100201436-100201301
136
ADH1A_HUMAN
277-322
46
2
A:276-321
B:276-321
46
46
1.8
ENST00000209668
8
ENSE00001747390
chr4:
100200721-100200583
139
ADH1A_HUMAN
322-368
47
2
A:321-367
B:321-367
47
47
1.9
ENST00000209668
9
ENSE00001131569
chr4:
100197805-100197524
282
ADH1A_HUMAN
368-375
8
2
A:367-374
B:367-374
8
8
[
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]
SCOP Domains
(2, 4)
Info
All SCOP Domains
1a: SCOP_d1hsoa1 (A:1-162,A:339-374)
1b: SCOP_d1hsob1 (B:1-162,B:339-374)
2a: SCOP_d1hsoa2 (A:163-338)
2b: SCOP_d1hsob2 (B:163-338)
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Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All beta proteins
(24004)
Fold
:
GroES-like
(132)
Superfamily
:
GroES-like
(130)
Family
:
Alcohol dehydrogenase-like, N-terminal domain
(114)
Protein domain
:
Alcohol dehydrogenase
(77)
Human (Homo sapiens), different isozymes [TaxId: 9606]
(24)
1a
d1hsoa1
A:1-162,A:339-374
1b
d1hsob1
B:1-162,B:339-374
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
NAD(P)-binding Rossmann-fold domains
(1604)
Superfamily
:
NAD(P)-binding Rossmann-fold domains
(1604)
Family
:
Alcohol dehydrogenase-like, C-terminal domain
(115)
Protein domain
:
Alcohol dehydrogenase
(77)
Human (Homo sapiens), different isozymes [TaxId: 9606]
(24)
2a
d1hsoa2
A:163-338
2b
d1hsob2
B:163-338
[
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CATH Domains
(2, 4)
Info
all CATH domains
1a: CATH_1hsoA02 (A:179-317)
1b: CATH_1hsoB02 (B:179-317)
2a: CATH_1hsoA01 (A:1-178,A:318-374)
2b: CATH_1hsoB01 (B:1-178,B:318-374)
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)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Rossmann fold
(7312)
Homologous Superfamily
:
NAD(P)-binding Rossmann-like Domain
(1244)
Human (Homo sapiens)
(188)
1a
1hsoA02
A:179-317
1b
1hsoB02
B:179-317
Architecture
:
Alpha-Beta Complex
(3881)
Topology
:
Quinone Oxidoreductase; Chain A, domain 1
(131)
Homologous Superfamily
:
Medium-chain alcohol dehydrogenases, catalytic domain
(131)
Human (Homo sapiens)
(30)
2a
1hsoA01
A:1-178,A:318-374
2b
1hsoB01
B:1-178,B:318-374
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Pfam Domains
(0, 0)
Info
all PFAM domains
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