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1HR1
Asym. Unit
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Asym.Unit (56 KB)
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Models
(15 )
Title
:
STRUCTURE OF AN INDOLICIDIN PEPTIDE DERIVATIVE WITH P-->A SUBSTITUTION
Authors
:
C. L. Friedrich, A. Rozek, A. Patrzykat, R. E. W. Hancock
Date
:
20 Dec 00 (Deposition) - 03 Jan 01 (Release) - 24 Feb 09 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A (15 x)
Keywords
:
Alpha-Helix, Cationic Antimicrobial Peptide, Antimicrobial Protein
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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Reference
:
C. L. Friedrich, A. Rozek, A. Patrzykat, R. E. W. Hancock
Structure And Mechanism Of Action Of An Indolicidin Peptide Derivative With Improved Activity Against Gram-Positive Bacteria
J. Biol. Chem. V. 276 24015 2001
(for further references see the
PDB file header
)
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Hetero Components
(1, 1)
Info
All Hetero Components
1a: AMINO GROUP (NH2a)
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No.
Name
Count
Type
Full Name
1
NH2
1
Mod. Amino Acid
AMINO GROUP
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Sites
(1, 1)
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All Sites
1: AC1 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
TRP A:11 , ARG A:13
BINDING SITE FOR RESIDUE NH2 A 14
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SAPs(SNPs)/Variants
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PROSITE Patterns/Profiles
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Exons
(1, 1)
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Exon 1.4 (A:1-14)
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All Exon Boundaries
1: Boundary 1.3/1.4
2: Boundary 1.4/-
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENSBTAT00000026747
1
ENSBTAE00000406162
chr22:
52827796-52827583
214
CTHL4_BOVIN
1-66
66
0
-
-
1.2
ENSBTAT00000026747
2
ENSBTAE00000395198
chr22:
52827479-52827372
108
CTHL4_BOVIN
67-102
36
0
-
-
1.3
ENSBTAT00000026747
3
ENSBTAE00000381050
chr22:
52827234-52827163
72
CTHL4_BOVIN
103-126
24
0
-
-
1.4
ENSBTAT00000026747
4
ENSBTAE00000217700
chr22:
52826575-52826416
160
CTHL4_BOVIN
127-144
18
1
A:1-14
14
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SCOP Domains
(1, 1)
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All SCOP Domains
1a: SCOP_d1hr1a_ (A:)
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Organisms
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Class
:
Peptides
(792)
Fold
:
Membrane-bound antimicrobial peptides
(6)
Superfamily
:
Membrane-bound antimicrobial peptides
(6)
Family
:
Membrane-bound antimicrobial peptides
(6)
Protein domain
:
Indolicidin
(5)
Synthetic, based on Bos taurus sequence
(5)
1a
d1hr1a_
A:
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CATH Domains
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Pfam Domains
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Chain A
Asymmetric Unit 1
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select residue range 5 to 10 in all chains
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select residue range 5 to 10 in chain 'A'
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