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Asym.Unit (192 KB)
Biol.Unit 1 (185 KB)
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(1)
Title
:
STRUCTURE OF GUANINE NUCLEOTIDE (GPPCP) COMPLEX OF ADENYLOSUCCINATE SYNTHETASE FROM E. COLI AT PH 6.5 AND 25 DEGREES CELSIUS
Authors
:
B. W. Poland, Z. Hou, C. Bruns, H. J. Fromm, R. B. Honzatko
Date
:
26 Apr 96 (Deposition) - 12 Feb 97 (Release) - 15 Sep 10 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.30
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Ligase, Purine Nucleotide Biosynthesis, Gtp-Hydrolysing Enzymes
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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Reference
:
B. W. Poland, Z. Hou, C. Bruns, H. J. Fromm, R. B. Honzatko
Refined Crystal Structures Of Guanine Nucleotide Complexes Of Adenylosuccinate Synthetase From Escherichia Coli.
J. Biol. Chem. V. 271 15407 1996
(for further references see the
PDB file header
)
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Hetero Components
(2, 2)
Info
All Hetero Components
1a: AMINOPHOSPHONIC ACID-GUANYLATE EST... (GNHa)
2a: PHOSPHOAMINOPHOSPHONIC ACID-GUANYL... (GNPa)
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No.
Name
Count
Type
Full Name
1
GNH
1
Ligand/Ion
AMINOPHOSPHONIC ACID-GUANYLATE ESTER
2
GNP
1
Ligand/Ion
PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER
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Sites
(4, 4)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: GNA (UNKNOWN)
4: GNB (UNKNOWN)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
GLY A:15 , LYS A:16 , GLY A:17 , LYS A:18 , GLY A:40 , THR A:42 , THR A:300 , LYS A:331 , ASP A:333 , SER A:414 , GLY A:416 , PRO A:417 , HOH A:447 , HOH A:566 , HOH A:595
BINDING SITE FOR RESIDUE GNH A 432A
2
AC2
SOFTWARE
ASP A:13 , GLU A:14 , GLY A:15 , LYS A:16 , GLY A:17 , LYS A:18 , THR A:300 , LYS A:331 , ASP A:333 , SER A:414 , GLY A:416 , PRO A:417 , HOH A:566 , HOH A:595
BINDING SITE FOR RESIDUE GNP A 432B
3
GNA
UNKNOWN
ASP A:13 , GLU A:14 , GLY A:15 , LYS A:16 , GLY A:17 , LYS A:18 , LYS A:331 , LEU A:332 , ASP A:333 , SER A:414 , THR A:415 , GLY A:416 , PRO A:417
THESE RESIDUES MAKE UP THE GUANINE NUCLEOTIDE BINDING SITE ON ADENYLOSUCCINATE SYNTHETASE.
4
GNB
UNKNOWN
ASP B:13 , GLU B:14 , GLY B:15 , LYS B:16 , GLY B:17 , LYS B:18 , LYS B:331 , LEU B:332 , ASP B:333 , SER B:414 , THR B:415 , GLY B:416 , PRO B:417
THESE RESIDUES MAKE UP THE GUANINE NUCLEOTIDE BINDING SITE ON ADENYLOSUCCINATE SYNTHETASE.
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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PROSITE Patterns/Profiles
(2, 4)
Info
All PROSITE Patterns/Profiles
1: ADENYLOSUCCIN_SYN_1 (A:10-17,B:10-17)
2: ADENYLOSUCCIN_SYN_2 (A:132-143,B:132-143)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
ADENYLOSUCCIN_SYN_1
PS01266
Adenylosuccinate synthetase GTP-binding site.
PURA_ECOLI
11-18
2
A:10-17
B:10-17
2
ADENYLOSUCCIN_SYN_2
PS00513
Adenylosuccinate synthetase active site.
PURA_ECOLI
133-144
2
A:132-143
B:132-143
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Exons
(0, 0)
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d1hooa_ (A:)
1b: SCOP_d1hoob_ (B:)
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Protein Domains
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)
(
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Organisms
(
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(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
P-loop containing nucleoside triphosphate hydrolases
(2083)
Superfamily
:
P-loop containing nucleoside triphosphate hydrolases
(2083)
Family
:
Nitrogenase iron protein-like
(152)
Protein domain
:
Adenylosuccinate synthetase, PurA
(35)
Escherichia coli [TaxId: 562]
(23)
1a
d1hooa_
A:
1b
d1hoob_
B:
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CATH Domains
(3, 6)
Info
all CATH domains
1a: CATH_1hooA01 (A:1-100,A:201-265)
1b: CATH_1hooB01 (B:1-100,B:201-265)
2a: CATH_1hooA03 (A:266-431)
2b: CATH_1hooB03 (B:266-431)
3a: CATH_1hooA02 (A:101-200)
3b: CATH_1hooB02 (B:101-200)
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Organisms
(
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(
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Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Adenylosuccinate Synthetase; Chain A, domain 1
(36)
Homologous Superfamily
:
Adenylosuccinate Synthetase, subunit A, domain 1
(36)
Escherichia coli. Organism_taxid: 562. Strain: h1238.
(1)
1a
1hooA01
A:1-100,A:201-265
1b
1hooB01
B:1-100,B:201-265
Architecture
:
Alpha-Beta Complex
(3881)
Topology
:
Adenylosuccinate Synthetase; Chain A, domain 3
(36)
Homologous Superfamily
:
Adenylosuccinate Synthetase, subunit A, domain 3
(36)
Escherichia coli. Organism_taxid: 562. Strain: h1238.
(1)
2a
1hooA03
A:266-431
2b
1hooB03
B:266-431
Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
Adenylosuccinate Synthetase, subunit A; domain 2
(36)
Homologous Superfamily
:
Adenylosuccinate Synthetase, subunit A, domain 2
(36)
Escherichia coli. Organism_taxid: 562. Strain: h1238.
(1)
3a
1hooA02
A:101-200
3b
1hooB02
B:101-200
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Pfam Domains
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