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1HL5
Asym. Unit
Info
Asym.Unit (446 KB)
Biol.Unit 1 (58 KB)
Biol.Unit 2 (58 KB)
Biol.Unit 3 (58 KB)
Biol.Unit 4 (57 KB)
Biol.Unit 5 (57 KB)
Biol.Unit 6 (54 KB)
Biol.Unit 7 (56 KB)
Biol.Unit 8 (55 KB)
Biol.Unit 9 (53 KB)
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(1)
Title
:
THE STRUCTURE OF HOLO TYPE HUMAN CU, ZN SUPEROXIDE DISMUTASE
Authors
:
R. W. Strange, S. Antonyuk, M. A. Hough, P. Doucette, J. Rodriguez, P. J. L. J. Hayward, J. S. Valentine, S. S. Hasnain
Date
:
13 Mar 03 (Deposition) - 08 May 03 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.80
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,S
Biol. Unit 1: A,H (1x)
Biol. Unit 2: B,I (1x)
Biol. Unit 3: C,J (1x)
Biol. Unit 4: D,K (1x)
Biol. Unit 5: E,L (1x)
Biol. Unit 6: F,M (1x)
Biol. Unit 7: G,N (1x)
Biol. Unit 8: O,Q (1x)
Biol. Unit 9: P,S (1x)
Keywords
:
Oxidoreductase, Human Cu, Zn Superoxide Dismutase, Antioxidant, Metal-Binding, Amyotrophic Lateral Sclerosis, Disease Mutation
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
R. W. Strange, S. Antonyuk, M. A. Hough, P. Doucette, J. Rodriguez, P. J. Hart, L. J. Hayward, J. S. Valentine, S. S. Hasnain
The Structure Of Holo And Metal-Deficient Wild-Type Human Cu, Zn Superoxide Dismutase And Its Relevance To Familial Amyotrophic Lateral Sclerosis
J. Mol. Biol. V. 328 877 2003
[
close entry info
]
Hetero Components
(3, 39)
Info
All Hetero Components
1a: CALCIUM ION (CAa)
1b: CALCIUM ION (CAb)
1c: CALCIUM ION (CAc)
2a: COPPER (II) ION (CUa)
2b: COPPER (II) ION (CUb)
2c: COPPER (II) ION (CUc)
2d: COPPER (II) ION (CUd)
2e: COPPER (II) ION (CUe)
2f: COPPER (II) ION (CUf)
2g: COPPER (II) ION (CUg)
2h: COPPER (II) ION (CUh)
2i: COPPER (II) ION (CUi)
2j: COPPER (II) ION (CUj)
2k: COPPER (II) ION (CUk)
2l: COPPER (II) ION (CUl)
2m: COPPER (II) ION (CUm)
2n: COPPER (II) ION (CUn)
2o: COPPER (II) ION (CUo)
2p: COPPER (II) ION (CUp)
2q: COPPER (II) ION (CUq)
2r: COPPER (II) ION (CUr)
3a: ZINC ION (ZNa)
3b: ZINC ION (ZNb)
3c: ZINC ION (ZNc)
3d: ZINC ION (ZNd)
3e: ZINC ION (ZNe)
3f: ZINC ION (ZNf)
3g: ZINC ION (ZNg)
3h: ZINC ION (ZNh)
3i: ZINC ION (ZNi)
3j: ZINC ION (ZNj)
3k: ZINC ION (ZNk)
3l: ZINC ION (ZNl)
3m: ZINC ION (ZNm)
3n: ZINC ION (ZNn)
3o: ZINC ION (ZNo)
3p: ZINC ION (ZNp)
3q: ZINC ION (ZNq)
3r: ZINC ION (ZNr)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CA
3
Ligand/Ion
CALCIUM ION
2
CU
18
Ligand/Ion
COPPER (II) ION
3
ZN
18
Ligand/Ion
ZINC ION
[
close Hetero Component info
]
Sites
(39, 39)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
21: CC3 (SOFTWARE)
22: CC4 (SOFTWARE)
23: CC5 (SOFTWARE)
24: CC6 (SOFTWARE)
25: CC7 (SOFTWARE)
26: CC8 (SOFTWARE)
27: CC9 (SOFTWARE)
28: DC1 (SOFTWARE)
29: DC2 (SOFTWARE)
30: DC3 (SOFTWARE)
31: DC4 (SOFTWARE)
32: DC5 (SOFTWARE)
33: DC6 (SOFTWARE)
34: DC7 (SOFTWARE)
35: DC8 (SOFTWARE)
36: DC9 (SOFTWARE)
37: EC1 (SOFTWARE)
38: EC2 (SOFTWARE)
39: EC3 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
HIS A:46 , HIS A:48 , HIS A:63 , HIS A:120 , HOH A:2047
BINDING SITE FOR RESIDUE CU A 154
02
AC2
SOFTWARE
HIS A:63 , HIS A:71 , HIS A:80 , ASP A:83 , LYS A:136
BINDING SITE FOR RESIDUE ZN A 155
03
AC3
SOFTWARE
HIS B:46 , HIS B:48 , HIS B:63 , HIS B:120 , HOH B:2083
BINDING SITE FOR RESIDUE CU B 154
04
AC4
SOFTWARE
HIS B:63 , HIS B:71 , HIS B:80 , ASP B:83
BINDING SITE FOR RESIDUE ZN B 155
05
AC5
SOFTWARE
HIS C:46 , HIS C:48 , HIS C:63 , HIS C:120 , HOH C:2074
BINDING SITE FOR RESIDUE CU C 154
06
AC6
SOFTWARE
HIS C:63 , HIS C:71 , HIS C:80 , ASP C:83
BINDING SITE FOR RESIDUE ZN C 155
07
AC7
SOFTWARE
ASN C:26 , SER C:102 , HOH C:2035 , HOH C:2037 , HOH C:2038 , HOH C:2106
BINDING SITE FOR RESIDUE CA C 156
08
AC8
SOFTWARE
HIS D:46 , HIS D:48 , HIS D:63 , HIS D:120 , HOH D:2049
BINDING SITE FOR RESIDUE CU D 154
09
AC9
SOFTWARE
HIS D:63 , HIS D:71 , HIS D:80 , ASP D:83
BINDING SITE FOR RESIDUE ZN D 155
10
BC1
SOFTWARE
HOH A:2063 , ASN D:26 , SER D:102 , HOH D:2024 , HOH D:2072
BINDING SITE FOR RESIDUE CA D 156
11
BC2
SOFTWARE
HIS E:46 , HIS E:48 , HIS E:63 , HIS E:120 , HOH E:2052
BINDING SITE FOR RESIDUE CU E 154
12
BC3
SOFTWARE
HIS E:63 , HIS E:71 , HIS E:80 , ASP E:83
BINDING SITE FOR RESIDUE ZN E 155
13
BC4
SOFTWARE
HIS F:46 , HIS F:48 , HIS F:63 , HIS F:120 , HOH F:2040
BINDING SITE FOR RESIDUE CU F 154
14
BC5
SOFTWARE
HIS F:63 , HIS F:71 , HIS F:80 , ASP F:83
BINDING SITE FOR RESIDUE ZN F 155
15
BC6
SOFTWARE
HIS G:46 , HIS G:48 , HIS G:63 , HIS G:120 , HOH G:2010 , HOH G:2022
BINDING SITE FOR RESIDUE CU G 154
16
BC7
SOFTWARE
HIS G:63 , HIS G:71 , HIS G:80 , ASP G:83 , LYS G:136
BINDING SITE FOR RESIDUE ZN G 155
17
BC8
SOFTWARE
HIS H:46 , HIS H:48 , HIS H:63 , HIS H:120 , HOH H:2050
BINDING SITE FOR RESIDUE CU H 154
18
BC9
SOFTWARE
HIS H:63 , HIS H:71 , HIS H:80 , ASP H:83
BINDING SITE FOR RESIDUE ZN H 155
19
CC1
SOFTWARE
HIS I:46 , HIS I:48 , HIS I:63 , HIS I:120 , HOH I:2069
BINDING SITE FOR RESIDUE CU I 154
20
CC2
SOFTWARE
HIS I:63 , HIS I:71 , HIS I:80 , ASP I:83
BINDING SITE FOR RESIDUE ZN I 155
21
CC3
SOFTWARE
HIS J:46 , HIS J:48 , HIS J:63 , HIS J:120 , HOH J:2064
BINDING SITE FOR RESIDUE CU J 154
22
CC4
SOFTWARE
HIS J:63 , HIS J:71 , HIS J:80 , ASP J:83
BINDING SITE FOR RESIDUE ZN J 155
23
CC5
SOFTWARE
HIS K:46 , HIS K:48 , HIS K:63 , HIS K:120 , HOH K:2063
BINDING SITE FOR RESIDUE CU K 154
24
CC6
SOFTWARE
HIS K:63 , HIS K:71 , HIS K:80 , ASP K:83 , LYS K:136
BINDING SITE FOR RESIDUE ZN K 155
25
CC7
SOFTWARE
HIS L:46 , HIS L:48 , HIS L:63 , HIS L:120
BINDING SITE FOR RESIDUE CU L 154
26
CC8
SOFTWARE
HIS L:63 , HIS L:71 , HIS L:80 , ASP L:83
BINDING SITE FOR RESIDUE ZN L 155
27
CC9
SOFTWARE
HIS M:46 , HIS M:48 , HIS M:63 , HIS M:120 , HOH M:2041
BINDING SITE FOR RESIDUE CU M 154
28
DC1
SOFTWARE
HIS M:63 , HIS M:71 , HIS M:80 , ASP M:83 , LYS M:136
BINDING SITE FOR RESIDUE ZN M 155
29
DC2
SOFTWARE
HIS N:46 , HIS N:48 , HIS N:63 , HIS N:120 , HOH N:2038
BINDING SITE FOR RESIDUE CU N 154
30
DC3
SOFTWARE
HIS N:63 , HIS N:71 , HIS N:80 , ASP N:83
BINDING SITE FOR RESIDUE ZN N 155
31
DC4
SOFTWARE
HIS O:46 , HIS O:48 , HIS O:63 , HIS O:120
BINDING SITE FOR RESIDUE CU O 154
32
DC5
SOFTWARE
HIS O:63 , HIS O:71 , HIS O:80 , ASP O:83 , LYS O:136
BINDING SITE FOR RESIDUE ZN O 155
33
DC6
SOFTWARE
ASN H:26 , SER H:102 , HOH H:2081 , HOH H:2084 , HOH H:2085
BINDING SITE FOR RESIDUE CA O 156
34
DC7
SOFTWARE
HIS P:46 , HIS P:48 , HIS P:63 , HIS P:120
BINDING SITE FOR RESIDUE CU P 154
35
DC8
SOFTWARE
HIS P:63 , HIS P:71 , HIS P:80 , ASP P:83
BINDING SITE FOR RESIDUE ZN P 155
36
DC9
SOFTWARE
HIS Q:46 , HIS Q:48 , HIS Q:63 , HIS Q:120 , HOH Q:2040
BINDING SITE FOR RESIDUE CU Q 154
37
EC1
SOFTWARE
HIS Q:63 , HIS Q:71 , HIS Q:80 , ASP Q:83
BINDING SITE FOR RESIDUE ZN Q 155
38
EC2
SOFTWARE
HIS S:46 , HIS S:48 , HIS S:63 , HIS S:120
BINDING SITE FOR RESIDUE CU S 154
39
EC3
SOFTWARE
HIS S:63 , HIS S:71 , HIS S:80 , ASP S:83
BINDING SITE FOR RESIDUE ZN S 155
[
close Site info
]
SAPs(SNPs)/Variants
(78, 1402)
Info
(mutated residues are not available)
All SNPs/Variants
01: VAR_013518 (A4S, chain A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S, )
02: VAR_007130 (A4T, chain A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S, )
03: VAR_007131 (A4V, chain A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S, )
04: VAR_008717 (C6F, chain A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S, )
05: VAR_007132 (V7E, chain A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S, )
06: VAR_013519 (L8Q, chain A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S, )
07: VAR_013520 (L8V, chain A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S, )
08: VAR_013521 (G12R, chain A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S, )
09: VAR_013522 (V14G, chain A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S, )
10: VAR_007133 (V14M, chain A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S, )
11: VAR_007134 (G16S, chain A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S, )
12: VAR_045876 (F20C, chain A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S, )
13: VAR_013523 (E21G, chain A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S, )
14: VAR_007135 (E21K, chain A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S, )
15: VAR_045877 (Q22L, chain A/B/C/D/E/G/H/I/J/K/L/M/N/O/P/Q/S, )
16: VAR_007136 (G37R, chain A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S, )
17: VAR_013524 (L38R, chain A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S, )
18: VAR_007137 (L38V, chain A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S, )
19: VAR_007139 (G41D, chain A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S, )
20: VAR_007138 (G41S, chain A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S, )
21: VAR_007140 (H43R, chain A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S, )
22: VAR_013525 (F45C, chain A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S, )
23: VAR_007141 (H46R, chain A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S, )
24: VAR_007142 (H48Q, chain A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S, )
25: VAR_045878 (H48R, chain A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S, )
26: VAR_013526 (E49K, chain A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S, )
27: VAR_045879 (T54R, chain A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S, )
28: VAR_013527 (N65S, chain A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S, )
29: VAR_065560 (L67P, chain A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S, )
30: VAR_013528 (L67R, chain A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S, )
31: VAR_008718 (G72S, chain A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S, )
32: VAR_013529 (D76Y, chain A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S, )
33: VAR_016874 (H80A, chain A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S, )
34: VAR_013530 (L84F, chain A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S, )
35: VAR_007143 (L84V, chain A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S, )
36: VAR_007144 (G85R, chain A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S, )
37: VAR_013531 (N86S, chain A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S, )
38: VAR_045880 (V87A, chain A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S, )
39: VAR_045881 (A89T, chain A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S, )
40: VAR_013532 (A89V, chain A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S, )
41: VAR_007145 (D90A, chain A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S, )
42: VAR_013533 (D90V, chain A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S, )
43: VAR_007146 (G93A, chain A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S, )
44: VAR_007147 (G93C, chain A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S, )
45: VAR_007148 (G93D, chain A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S, )
46: VAR_007149 (G93R, chain A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S, )
47: VAR_008719 (G93V, chain A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S, )
48: VAR_065194 (A95G, chain A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S, )
49: VAR_045882 (V97M, chain A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S, )
50: VAR_007150 (E100G, chain A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S, )
51: VAR_013534 (E100K, chain A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S, )
52: VAR_007151 (D101G, chain A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S, )
53: VAR_007152 (D101N, chain A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S, )
54: VAR_008720 (I104F, chain A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S, )
55: VAR_013535 (S105L, chain A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S, )
56: VAR_007153 (L106V, chain A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S, )
57: VAR_013536 (G108V, chain A/B/C/D/F/G/H/I/J/K/L/M/N/O/P/Q/S, )
58: VAR_013537 (I112M, chain A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S, )
59: VAR_007154 (I112T, chain A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S, )
60: VAR_007155 (I113T, chain A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S, )
61: VAR_013538 (G114A, chain A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S, )
62: VAR_007156 (R115G, chain A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S, )
63: VAR_045883 (V118L, chain A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S, )
64: VAR_045884 (D124G, chain A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S, )
65: VAR_008722 (D124V, chain A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S, )
66: VAR_007157 (D125H, chain A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S, )
67: VAR_013539 (L126S, chain A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S, )
68: VAR_007158 (S134N, chain A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S, )
69: VAR_007159 (N139K, chain A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S, )
70: VAR_007160 (L144F, chain A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S, )
71: VAR_008724 (L144S, chain A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S, )
72: VAR_008725 (A145T, chain A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S, )
73: VAR_013540 (C146R, chain A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S, )
74: VAR_045885 (G147R, chain A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S, )
75: VAR_007161 (V148G, chain A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S, )
76: VAR_007162 (V148I, chain A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S, )
77: VAR_007163 (I149T, chain A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S, )
78: VAR_007164 (I151T, chain A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
01
UniProt
VAR_013518
A
5
S
SODC_HUMAN
Disease (ALS1)
---
A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S
A
4
S
02
UniProt
VAR_007130
A
5
T
SODC_HUMAN
Disease (ALS1)
---
A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S
A
4
T
03
UniProt
VAR_007131
A
5
V
SODC_HUMAN
Disease (ALS1)
---
A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S
A
4
V
04
UniProt
VAR_008717
C
7
F
SODC_HUMAN
Disease (ALS1)
---
A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S
C
6
F
05
UniProt
VAR_007132
V
8
E
SODC_HUMAN
Disease (ALS1)
---
A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S
V
7
E
06
UniProt
VAR_013519
L
9
Q
SODC_HUMAN
Disease (ALS1)
---
A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S
L
8
Q
07
UniProt
VAR_013520
L
9
V
SODC_HUMAN
Disease (ALS1)
---
A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S
L
8
V
08
UniProt
VAR_013521
G
13
R
SODC_HUMAN
Disease (ALS1)
---
A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S
G
12
R
09
UniProt
VAR_013522
V
15
G
SODC_HUMAN
Disease (ALS1)
---
A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S
V
14
G
10
UniProt
VAR_007133
V
15
M
SODC_HUMAN
Disease (ALS1)
---
A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S
V
14
M
11
UniProt
VAR_007134
G
17
S
SODC_HUMAN
Disease (ALS1)
---
A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S
G
16
S
12
UniProt
VAR_045876
F
21
C
SODC_HUMAN
Disease (ALS1)
---
A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S
F
20
C
13
UniProt
VAR_013523
E
22
G
SODC_HUMAN
Disease (ALS1)
---
A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S
E
21
G
14
UniProt
VAR_007135
E
22
K
SODC_HUMAN
Disease (ALS1)
---
A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S
E
21
K
15
UniProt
VAR_045877
Q
23
L
SODC_HUMAN
Disease (ALS1)
---
A/B/C/D/E/G/H/I/J/K/L/M/N/O/P/Q/S
Q
22
L
16
UniProt
VAR_007136
G
38
R
SODC_HUMAN
Disease (ALS1)
---
A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S
G
37
R
17
UniProt
VAR_013524
L
39
R
SODC_HUMAN
Disease (ALS1)
---
A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S
L
38
R
18
UniProt
VAR_007137
L
39
V
SODC_HUMAN
Disease (ALS1)
---
A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S
L
38
V
19
UniProt
VAR_007139
G
42
D
SODC_HUMAN
Disease (ALS1)
---
A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S
G
41
D
20
UniProt
VAR_007138
G
42
S
SODC_HUMAN
Disease (ALS1)
---
A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S
G
41
S
21
UniProt
VAR_007140
H
44
R
SODC_HUMAN
Disease (ALS1)
---
A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S
H
43
R
22
UniProt
VAR_013525
F
46
C
SODC_HUMAN
Disease (ALS1)
---
A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S
F
45
C
23
UniProt
VAR_007141
H
47
R
SODC_HUMAN
Disease (ALS1)
---
A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S
H
46
R
24
UniProt
VAR_007142
H
49
Q
SODC_HUMAN
Disease (ALS1)
---
A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S
H
48
Q
25
UniProt
VAR_045878
H
49
R
SODC_HUMAN
Disease (ALS1)
---
A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S
H
48
R
26
UniProt
VAR_013526
E
50
K
SODC_HUMAN
Disease (ALS1)
---
A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S
E
49
K
27
UniProt
VAR_045879
T
55
R
SODC_HUMAN
Disease (ALS1)
---
A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S
T
54
R
28
UniProt
VAR_013527
N
66
S
SODC_HUMAN
Disease (ALS1)
---
A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S
N
65
S
29
UniProt
VAR_065560
L
68
P
SODC_HUMAN
Disease (ALS1)
---
A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S
L
67
P
30
UniProt
VAR_013528
L
68
R
SODC_HUMAN
Disease (ALS1)
---
A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S
L
67
R
31
UniProt
VAR_008718
G
73
S
SODC_HUMAN
Disease (ALS1)
---
A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S
G
72
S
32
UniProt
VAR_013529
D
77
Y
SODC_HUMAN
Disease (ALS1)
---
A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S
D
76
Y
33
UniProt
VAR_016874
H
81
A
SODC_HUMAN
Disease (ALS1)
---
A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S
H
80
A
34
UniProt
VAR_013530
L
85
F
SODC_HUMAN
Disease (ALS1)
---
A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S
L
84
F
35
UniProt
VAR_007143
L
85
V
SODC_HUMAN
Disease (ALS1)
---
A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S
L
84
V
36
UniProt
VAR_007144
G
86
R
SODC_HUMAN
Disease (ALS1)
---
A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S
G
85
R
37
UniProt
VAR_013531
N
87
S
SODC_HUMAN
Disease (ALS1)
11556620
A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S
N
86
S
38
UniProt
VAR_045880
V
88
A
SODC_HUMAN
Disease (ALS1)
---
A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S
V
87
A
39
UniProt
VAR_045881
A
90
T
SODC_HUMAN
Disease (ALS1)
---
A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S
A
89
T
40
UniProt
VAR_013532
A
90
V
SODC_HUMAN
Disease (ALS1)
---
A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S
A
89
V
41
UniProt
VAR_007145
D
91
A
SODC_HUMAN
Disease (ALS1)
80265967
A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S
D
90
A
42
UniProt
VAR_013533
D
91
V
SODC_HUMAN
Disease (ALS1)
---
A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S
D
90
V
43
UniProt
VAR_007146
G
94
A
SODC_HUMAN
Disease (ALS1)
---
A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S
G
93
A
44
UniProt
VAR_007147
G
94
C
SODC_HUMAN
Disease (ALS1)
---
A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S
G
93
C
45
UniProt
VAR_007148
G
94
D
SODC_HUMAN
Disease (ALS1)
---
A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S
G
93
D
46
UniProt
VAR_007149
G
94
R
SODC_HUMAN
Disease (ALS1)
---
A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S
G
93
R
47
UniProt
VAR_008719
G
94
V
SODC_HUMAN
Disease (ALS1)
---
A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S
G
93
V
48
UniProt
VAR_065194
A
96
G
SODC_HUMAN
Disease (ALS1)
---
A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S
A
95
G
49
UniProt
VAR_045882
V
98
M
SODC_HUMAN
Disease (ALS1)
---
A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S
V
97
M
50
UniProt
VAR_007150
E
101
G
SODC_HUMAN
Disease (ALS1)
---
A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S
E
100
G
51
UniProt
VAR_013534
E
101
K
SODC_HUMAN
Disease (ALS1)
---
A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S
E
100
K
52
UniProt
VAR_007151
D
102
G
SODC_HUMAN
Disease (ALS1)
---
A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S
D
101
G
53
UniProt
VAR_007152
D
102
N
SODC_HUMAN
Disease (ALS1)
---
A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S
D
101
N
54
UniProt
VAR_008720
I
105
F
SODC_HUMAN
Disease (ALS1)
---
A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S
I
104
F
55
UniProt
VAR_013535
S
106
L
SODC_HUMAN
Disease (ALS1)
---
A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S
S
105
L
56
UniProt
VAR_007153
L
107
V
SODC_HUMAN
Disease (ALS1)
---
A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S
L
106
V
57
UniProt
VAR_013536
G
109
V
SODC_HUMAN
Disease (ALS1)
---
A/B/C/D/F/G/H/I/J/K/L/M/N/O/P/Q/S
G
108
V
58
UniProt
VAR_013537
I
113
M
SODC_HUMAN
Disease (ALS1)
---
A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S
I
112
M
59
UniProt
VAR_007154
I
113
T
SODC_HUMAN
Disease (ALS1)
---
A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S
I
112
T
60
UniProt
VAR_007155
I
114
T
SODC_HUMAN
Disease (ALS1)
---
A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S
I
113
T
61
UniProt
VAR_013538
G
115
A
SODC_HUMAN
Disease (ALS1)
---
A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S
G
114
A
62
UniProt
VAR_007156
R
116
G
SODC_HUMAN
Disease (ALS1)
---
A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S
R
115
G
63
UniProt
VAR_045883
V
119
L
SODC_HUMAN
Disease (ALS1)
---
A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S
V
118
L
64
UniProt
VAR_045884
D
125
G
SODC_HUMAN
Disease (ALS1)
---
A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S
D
124
G
65
UniProt
VAR_008722
D
125
V
SODC_HUMAN
Disease (ALS1)
---
A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S
D
124
V
66
UniProt
VAR_007157
D
126
H
SODC_HUMAN
Disease (ALS1)
---
A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S
D
125
H
67
UniProt
VAR_013539
L
127
S
SODC_HUMAN
Disease (ALS1)
---
A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S
L
126
S
68
UniProt
VAR_007158
S
135
N
SODC_HUMAN
Disease (ALS1)
---
A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S
S
134
N
69
UniProt
VAR_007159
N
140
K
SODC_HUMAN
Disease (ALS1)
---
A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S
N
139
K
70
UniProt
VAR_007160
L
145
F
SODC_HUMAN
Disease (ALS1)
---
A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S
L
144
F
71
UniProt
VAR_008724
L
145
S
SODC_HUMAN
Disease (ALS1)
---
A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S
L
144
S
72
UniProt
VAR_008725
A
146
T
SODC_HUMAN
Disease (ALS1)
---
A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S
A
145
T
73
UniProt
VAR_013540
C
147
R
SODC_HUMAN
Disease (ALS1)
---
A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S
C
146
R
74
UniProt
VAR_045885
G
148
R
SODC_HUMAN
Disease (ALS1)
---
A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S
G
147
R
75
UniProt
VAR_007161
V
149
G
SODC_HUMAN
Disease (ALS1)
---
A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S
V
148
G
76
UniProt
VAR_007162
V
149
I
SODC_HUMAN
Disease (ALS1)
---
A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S
V
148
I
77
UniProt
VAR_007163
I
150
T
SODC_HUMAN
Disease (ALS1)
---
A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S
I
149
T
78
UniProt
VAR_007164
I
152
T
SODC_HUMAN
Disease (ALS1)
---
A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/S
I
151
T
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
[
close SNP/Variant info
]
PROSITE Patterns/Profiles
(2, 36)
Info
All PROSITE Patterns/Profiles
1: SOD_CU_ZN_1 (A:44-54,B:44-54,C:44-54,D:44-54,E:...)
2: SOD_CU_ZN_2 (A:138-149,B:138-149,C:138-149,D:13...)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
SOD_CU_ZN_1
PS00087
Copper/Zinc superoxide dismutase signature 1.
SODC_HUMAN
45-55
18
A:44-54
B:44-54
C:44-54
D:44-54
E:44-54
F:44-54
G:44-54
H:44-54
I:44-54
J:44-54
K:44-54
L:44-54
M:44-54
N:44-54
O:44-54
P:44-54
Q:44-54
S:44-54
2
SOD_CU_ZN_2
PS00332
Copper/Zinc superoxide dismutase signature 2.
SODC_HUMAN
139-150
18
A:138-149
B:138-149
C:138-149
D:138-149
E:138-149
F:138-149
G:138-149
H:138-149
I:138-149
J:138-149
K:138-149
L:138-149
M:138-149
N:138-149
O:138-149
P:138-149
Q:138-149
S:138-149
[
close PROSITE info
]
Exons
(5, 90)
Info
All Exons
Exon 1.1a (A:1-23 | B:1-23 | C:1-23 | D:1-23 ...)
Exon 1.3 (A:24-56 | B:24-56 | C:24-56 | D:24...)
Exon 1.4 (A:56-79 | B:56-79 | C:56-79 | D:56...)
Exon 1.5b (A:79-118 | B:79-118 | C:79-118 | D...)
Exon 1.6 (A:119-153 | B:119-153 | C:119-153 ...)
View:
Select:
Label:
All Exon Boundaries
1: Boundary -/1.1a
2: Boundary 1.1a/1.3
3: Boundary 1.3/1.4
4: Boundary 1.4/1.5b
5: Boundary 1.5b/1.6
6: Boundary 1.6/-
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1a
ENST00000270142
1a
ENSE00001507447
chr21:
33031935-33032154
220
SODC_HUMAN
1-24
24
18
A:1-23
B:1-23
C:1-23
D:1-23
E:1-23
F:3-21
G:1-23
H:1-23
I:1-23
J:1-23
K:1-23
L:2-23
M:2-23
N:1-23
O:1-23
P:1-23
Q:1-23
S:1-23
23
23
23
23
23
19
23
23
23
23
23
22
22
23
23
23
23
23
1.3
ENST00000270142
3
ENSE00001507446
chr21:
33036103-33036199
97
SODC_HUMAN
25-57
33
18
A:24-56
B:24-56
C:24-56
D:24-56
E:24-56
F:28-56
G:24-56
H:24-56
I:24-56
J:24-56
K:24-56
L:24-56
M:24-56
N:24-56
O:24-56
P:24-56
Q:24-56
S:24-56
33
33
33
33
33
29
33
33
33
33
33
33
33
33
33
33
33
33
1.4
ENST00000270142
4
ENSE00000952640
chr21:
33038762-33038831
70
SODC_HUMAN
57-80
24
18
A:56-79
B:56-79
C:56-79
D:56-79
E:56-79
F:56-79
G:56-79
H:56-79
I:56-79
J:56-79
K:56-79
L:56-79
M:56-79
N:56-79
O:56-79
P:56-79
Q:56-79
S:56-79
24
24
24
24
24
24
24
24
24
24
24
24
24
24
24
24
24
24
1.5b
ENST00000270142
5b
ENSE00000952641
chr21:
33039571-33039688
118
SODC_HUMAN
80-119
40
18
A:79-118
B:79-118
C:79-118
D:79-118
E:79-118 (gaps)
F:79-118
G:79-118
H:79-118
I:79-118
J:79-118
K:79-118
L:79-118
M:79-118
N:79-118
O:79-118
P:79-118
Q:79-118
S:79-118
40
40
40
40
40
40
40
40
40
40
40
40
40
40
40
40
40
40
1.6
ENST00000270142
6
ENSE00001847240
chr21:
33040784-33041244
461
SODC_HUMAN
120-154
35
18
A:119-153
B:119-153
C:119-153
D:119-153
E:119-153
F:119-153
G:119-153
H:119-153
I:119-153
J:119-153
K:119-153
L:119-153
M:119-153
N:119-153
O:119-153
P:119-153
Q:119-153
S:119-153
35
35
35
35
35
35
35
35
35
35
35
35
35
35
35
35
35
35
[
close EXON info
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SCOP Domains
(1, 18)
Info
All SCOP Domains
1a: SCOP_d1hl5a_ (A:)
1b: SCOP_d1hl5k_ (K:)
1c: SCOP_d1hl5l_ (L:)
1d: SCOP_d1hl5m_ (M:)
1e: SCOP_d1hl5n_ (N:)
1f: SCOP_d1hl5o_ (O:)
1g: SCOP_d1hl5p_ (P:)
1h: SCOP_d1hl5q_ (Q:)
1i: SCOP_d1hl5s_ (S:)
1j: SCOP_d1hl5b_ (B:)
1k: SCOP_d1hl5c_ (C:)
1l: SCOP_d1hl5d_ (D:)
1m: SCOP_d1hl5e_ (E:)
1n: SCOP_d1hl5f_ (F:)
1o: SCOP_d1hl5g_ (G:)
1p: SCOP_d1hl5h_ (H:)
1q: SCOP_d1hl5i_ (I:)
1r: SCOP_d1hl5j_ (J:)
View:
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Label:
Classes
(
)
(
)
Folds
(
)
(
)
Superfamilies
(
)
(
)
Families
(
)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All beta proteins
(24004)
Fold
:
Immunoglobulin-like beta-sandwich
(7299)
Superfamily
:
Cu,Zn superoxide dismutase-like
(165)
Family
:
Cu,Zn superoxide dismutase-like
(158)
Protein domain
:
Cu,Zn superoxide dismutase, SOD
(134)
Human (Homo sapiens) [TaxId: 9606]
(69)
1a
d1hl5a_
A:
1b
d1hl5k_
K:
1c
d1hl5l_
L:
1d
d1hl5m_
M:
1e
d1hl5n_
N:
1f
d1hl5o_
O:
1g
d1hl5p_
P:
1h
d1hl5q_
Q:
1i
d1hl5s_
S:
1j
d1hl5b_
B:
1k
d1hl5c_
C:
1l
d1hl5d_
D:
1m
d1hl5e_
E:
1n
d1hl5f_
F:
1o
d1hl5g_
G:
1p
d1hl5h_
H:
1q
d1hl5i_
I:
1r
d1hl5j_
J:
[
close SCOP info
]
CATH Domains
(1, 18)
Info
all CATH domains
1a: CATH_1hl5E00 (E:1-153)
1b: CATH_1hl5L00 (L:2-153)
1c: CATH_1hl5M00 (M:2-153)
1d: CATH_1hl5A00 (A:1-153)
1e: CATH_1hl5B00 (B:1-153)
1f: CATH_1hl5C00 (C:1-153)
1g: CATH_1hl5D00 (D:1-153)
1h: CATH_1hl5G00 (G:1-153)
1i: CATH_1hl5H00 (H:1-153)
1j: CATH_1hl5I00 (I:1-153)
1k: CATH_1hl5J00 (J:1-153)
1l: CATH_1hl5K00 (K:1-153)
1m: CATH_1hl5N00 (N:1-153)
1n: CATH_1hl5O00 (O:1-153)
1o: CATH_1hl5P00 (P:1-153)
1p: CATH_1hl5Q00 (Q:1-153)
1q: CATH_1hl5S00 (S:1-153)
1r: CATH_1hl5F00 (F:3-153)
View:
Select:
Label:
Classes
(
)
(
)
Architectures
(
)
(
)
Topologies
(
)
(
)
Homologous Superfamilies
(
)
(
)
Organisms
(
)
(
)
Class
:
Mainly Beta
(13760)
Architecture
:
Sandwich
(5577)
Topology
:
Immunoglobulin-like
(3897)
Homologous Superfamily
:
[code=2.60.40.200, no name defined]
(125)
Human (Homo sapiens)
(52)
1a
1hl5E00
E:1-153
1b
1hl5L00
L:2-153
1c
1hl5M00
M:2-153
1d
1hl5A00
A:1-153
1e
1hl5B00
B:1-153
1f
1hl5C00
C:1-153
1g
1hl5D00
D:1-153
1h
1hl5G00
G:1-153
1i
1hl5H00
H:1-153
1j
1hl5I00
I:1-153
1k
1hl5J00
J:1-153
1l
1hl5K00
K:1-153
1m
1hl5N00
N:1-153
1n
1hl5O00
O:1-153
1o
1hl5P00
P:1-153
1p
1hl5Q00
Q:1-153
1q
1hl5S00
S:1-153
1r
1hl5F00
F:3-153
[
close CATH info
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Pfam Domains
(0, 0)
Info
all PFAM domains
View:
Select:
Label:
Sorry, no Info available
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