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1HJS
Asym. Unit
Info
Asym.Unit (232 KB)
Biol.Unit 1 (61 KB)
Biol.Unit 2 (60 KB)
Biol.Unit 3 (59 KB)
Biol.Unit 4 (60 KB)
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(1)
Title
:
STRUCTURE OF TWO FUNGAL BETA-1,4-GALACTANASES: SEARCHING FOR THE BASIS FOR TEMPERATURE AND PH OPTIMUM.
Authors
:
J. Le Nours, C. Ryttersgaard, L. Lo Leggio, P. R. Ostergaard, T. V. Borchert, L. L. H. Christensen, S. Larsen
Date
:
27 Feb 03 (Deposition) - 02 Jun 03 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.87
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Biol. Unit 3: C (1x)
Biol. Unit 4: D (1x)
Keywords
:
Beta-1, 4-Galactanases, Family 53 Glycoside Hydrolase, Thermostability, Ph Optimum, Clan Gh-A, Thermophile, Alkalophile, Hydrolase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
J. Le Nours, C. Ryttersgaard, L. Lo Leggio, P. R. Ostergaard, T. V. Borchert, L. L. H. Christensen, S. Larsen
Structure Of Two Fungal Beta-1, 4-Galactanases: Searching For The Basis For Temperature And Ph Optimum
Protein Sci. V. 12 1195 2003
[
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Hetero Components
(4, 29)
Info
All Hetero Components
1a: 4-(2-HYDROXYETHYL)-1-PIPERAZINEETH... (EPEa)
2a: N-ACETYL-D-GLUCOSAMINE (NAGa)
2b: N-ACETYL-D-GLUCOSAMINE (NAGb)
2c: N-ACETYL-D-GLUCOSAMINE (NAGc)
2d: N-ACETYL-D-GLUCOSAMINE (NAGd)
3a: DI(HYDROXYETHYL)ETHER (PEGa)
3b: DI(HYDROXYETHYL)ETHER (PEGb)
3c: DI(HYDROXYETHYL)ETHER (PEGc)
3d: DI(HYDROXYETHYL)ETHER (PEGd)
3e: DI(HYDROXYETHYL)ETHER (PEGe)
3f: DI(HYDROXYETHYL)ETHER (PEGf)
3g: DI(HYDROXYETHYL)ETHER (PEGg)
3h: DI(HYDROXYETHYL)ETHER (PEGh)
3i: DI(HYDROXYETHYL)ETHER (PEGi)
3j: DI(HYDROXYETHYL)ETHER (PEGj)
3k: DI(HYDROXYETHYL)ETHER (PEGk)
3l: DI(HYDROXYETHYL)ETHER (PEGl)
3m: DI(HYDROXYETHYL)ETHER (PEGm)
4a: SULFATE ION (SO4a)
4b: SULFATE ION (SO4b)
4c: SULFATE ION (SO4c)
4d: SULFATE ION (SO4d)
4e: SULFATE ION (SO4e)
4f: SULFATE ION (SO4f)
4g: SULFATE ION (SO4g)
4h: SULFATE ION (SO4h)
4i: SULFATE ION (SO4i)
4j: SULFATE ION (SO4j)
4k: SULFATE ION (SO4k)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
EPE
1
Ligand/Ion
4-(2-HYDROXYETHYL)-1-PIPERAZINEETHANESULFONIC ACID
2
NAG
4
Ligand/Ion
N-ACETYL-D-GLUCOSAMINE
3
PEG
13
Ligand/Ion
DI(HYDROXYETHYL)ETHER
4
SO4
11
Ligand/Ion
SULFATE ION
[
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Sites
(29, 29)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
21: CC3 (SOFTWARE)
22: CC4 (SOFTWARE)
23: CC5 (SOFTWARE)
24: CC6 (SOFTWARE)
25: CC7 (SOFTWARE)
26: CC8 (SOFTWARE)
27: CC9 (SOFTWARE)
28: DC1 (SOFTWARE)
29: DC2 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ASN A:104 , TRP A:107 , ASN A:111
BINDING SITE FOR RESIDUE NAG A 601
02
AC2
SOFTWARE
ASN B:104 , TRP B:107 , ASN B:111 , HOH B:2161
BINDING SITE FOR RESIDUE NAG B 601
03
AC3
SOFTWARE
ASN C:104 , TRP C:107 , ASN C:111
BINDING SITE FOR RESIDUE NAG C 601
04
AC4
SOFTWARE
ASN D:104 , ASN D:111
BINDING SITE FOR RESIDUE NAG D 601
05
AC5
SOFTWARE
ASN A:51 , TRP A:98 , LYS A:108 , TYR A:112
BINDING SITE FOR RESIDUE SO4 A 701
06
AC6
SOFTWARE
HOH A:2177 , HOH A:2178 , ASN B:51 , TRP B:98 , LYS B:108 , TYR B:112
BINDING SITE FOR RESIDUE SO4 A 702
07
AC7
SOFTWARE
ARG A:5 , ASN A:42
BINDING SITE FOR RESIDUE SO4 A 703
08
AC8
SOFTWARE
HIS A:91 , SER A:219 , TYR A:257 , SER A:258
BINDING SITE FOR RESIDUE SO4 A 704
09
AC9
SOFTWARE
ARG B:5 , ASN B:42 , HOH B:2162
BINDING SITE FOR RESIDUE SO4 B 703
10
BC1
SOFTWARE
SER B:219 , TYR B:257 , SER B:258 , HIS C:91
BINDING SITE FOR RESIDUE SO4 B 705
11
BC2
SOFTWARE
ARG C:5 , ASN C:42
BINDING SITE FOR RESIDUE SO4 C 703
12
BC3
SOFTWARE
HIS B:91 , SER C:219 , TYR C:257 , SER C:258 , HOH C:2144
BINDING SITE FOR RESIDUE SO4 C 705
13
BC4
SOFTWARE
VAL D:50 , ASN D:51 , TRP D:98 , LYS D:108 , TYR D:112 , HOH D:2062 , HOH D:2151
BINDING SITE FOR RESIDUE SO4 D 701
14
BC5
SOFTWARE
ARG D:5 , ASN D:42 , HOH D:2152
BINDING SITE FOR RESIDUE SO4 D 703
15
BC6
SOFTWARE
HIS D:91 , SER D:219 , SER D:258 , HOH D:2153
BINDING SITE FOR RESIDUE SO4 D 705
16
BC7
SOFTWARE
TRP A:142 , PRO A:143 , ARG A:146 , HOH A:2180 , HOH A:2181 , HOH A:2182 , LEU B:223 , SER B:224 , LYS B:227 , SER B:228 , ASP B:262 , ASN B:279 , HOH B:2139
BINDING SITE FOR RESIDUE EPE A 901
17
BC8
SOFTWARE
LEU A:59 , ASP A:60 , ILE A:63 , LYS A:119 , HOH A:2040 , HOH A:2179
BINDING SITE FOR RESIDUE PEG A 801
18
BC9
SOFTWARE
TRP A:185 , LYS A:235 , THR A:236 , LYS D:235 , PEG D:802
BINDING SITE FOR RESIDUE PEG A 802
19
CC1
SOFTWARE
LYS A:235 , GLU C:148
BINDING SITE FOR RESIDUE PEG A 805
20
CC2
SOFTWARE
TRP A:183 , ASP A:184 , TRP A:185 , GLY A:186 , SER A:220 , ALA A:225
BINDING SITE FOR RESIDUE PEG A 806
21
CC3
SOFTWARE
ASN B:42 , GLY B:73 , HOH B:2085
BINDING SITE FOR RESIDUE PEG B 801
22
CC4
SOFTWARE
TRP B:185 , LYS B:235 , THR B:236 , PEG B:805
BINDING SITE FOR RESIDUE PEG B 802
23
CC5
SOFTWARE
LYS B:235 , PEG B:802
BINDING SITE FOR RESIDUE PEG B 805
24
CC6
SOFTWARE
TRP B:183 , TRP B:185 , GLY B:186 , SER B:220 , ALA B:225
BINDING SITE FOR RESIDUE PEG B 806
25
CC7
SOFTWARE
TRP C:185 , LYS C:235 , THR C:236
BINDING SITE FOR RESIDUE PEG C 802
26
CC8
SOFTWARE
ASP C:231 , ASN C:232 , LYS C:235
BINDING SITE FOR RESIDUE PEG C 805
27
CC9
SOFTWARE
LYS A:235 , PEG A:802 , ASN D:232 , LYS D:235 , THR D:236
BINDING SITE FOR RESIDUE PEG D 802
28
DC1
SOFTWARE
ASP D:231 , ASN D:232 , LYS D:235
BINDING SITE FOR RESIDUE PEG D 805
29
DC2
SOFTWARE
TRP D:183 , ASP D:184 , TRP D:185 , GLY D:186 , HOH D:2154
BINDING SITE FOR RESIDUE PEG D 806
[
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
View:
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Sorry, no Info available
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PROSITE Patterns/Profiles
(0, 0)
Info
All PROSITE Patterns/Profiles
;
View:
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End label:
Sorry, no Info available
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Exons
(0, 0)
Info
All Exons
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All Exon Boundaries
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 4)
Info
All SCOP Domains
1a: SCOP_d1hjsa_ (A:)
1b: SCOP_d1hjsb_ (B:)
1c: SCOP_d1hjsc_ (C:)
1d: SCOP_d1hjsd_ (D:)
View:
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Classes
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(
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(
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(
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Families
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)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
TIM beta/alpha-barrel
(3956)
Superfamily
:
(Trans)glycosidases
(1191)
Family
:
beta-glycanases
(284)
Protein domain
:
Beta-1,4-galactanase
(9)
Thielavia heterothallica, aka Myceliophthora thermophila [TaxId: 78579]
(2)
1a
d1hjsa_
A:
1b
d1hjsb_
B:
1c
d1hjsc_
C:
1d
d1hjsd_
D:
[
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CATH Domains
(1, 4)
Info
all CATH domains
1a: CATH_1hjsA00 (A:1-332)
1b: CATH_1hjsB00 (B:1-332)
1c: CATH_1hjsC00 (C:1-332)
1d: CATH_1hjsD00 (D:1-332)
View:
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(
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Homologous Superfamilies
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
Alpha-Beta Barrel
(2994)
Topology
:
TIM Barrel
(2806)
Homologous Superfamily
:
Glycosidases
(843)
Myceliophthora thermophila (Thielavia heterothallica)
(2)
1a
1hjsA00
A:1-332
1b
1hjsB00
B:1-332
1c
1hjsC00
C:1-332
1d
1hjsD00
D:1-332
[
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]
Pfam Domains
(0, 0)
Info
all PFAM domains
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Label:
Sorry, no Info available
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Protein & NOT Site
Protein & NOT PROSITE
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Chain C
Chain D
Asymmetric Unit 1
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