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1HG3
Biol. Unit 1
Info
Asym.Unit (263 KB)
Biol.Unit 1 (131 KB)
Biol.Unit 2 (131 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF TETRAMERIC TIM FROM PYROCOCCUS WOESEI.
Authors
:
H. Walden, G. S. Bell, R. J. M. Russell, B. Siebers, R. Hensel, G. L. Taylor
Date
:
12 Dec 00 (Deposition) - 07 Mar 01 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.70
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H
Biol. Unit 1: A,B,C,D (1x)
Biol. Unit 2: E,F,G,H (1x)
Keywords
:
Isomerase, Thermostability, Pyrococcus, Triosephosphate Isomerase, Tetrameric
(Keyword Search:
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Reference
:
H. Walden, G. S. Bell, R. J. M. Russell, B. Siebers, R. Hensel, G. L. Taylor
Tiny Tim: A Small, Tetrameric, Hyperthermostable Triosephosphate Isomerase
J. Mol. Biol. V. 306 745 2001
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Hetero Components
(1, 4)
Info
All Hetero Components
1a: 3-PHOSPHONOPROPANOIC ACID (3PPa)
1b: 3-PHOSPHONOPROPANOIC ACID (3PPb)
1c: 3-PHOSPHONOPROPANOIC ACID (3PPc)
1d: 3-PHOSPHONOPROPANOIC ACID (3PPd)
1e: 3-PHOSPHONOPROPANOIC ACID (3PPe)
1f: 3-PHOSPHONOPROPANOIC ACID (3PPf)
1g: 3-PHOSPHONOPROPANOIC ACID (3PPg)
1h: 3-PHOSPHONOPROPANOIC ACID (3PPh)
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No.
Name
Count
Type
Full Name
1
3PP
4
Ligand/Ion
3-PHOSPHONOPROPANOIC ACID
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Sites
(4, 4)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
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Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ASN A:12 , LYS A:14 , HIS A:96 , GLU A:144 , ILE A:149 , ALA A:183 , GLY A:184 , LEU A:204 , ALA A:205 , SER A:206 , HOH A:2036 , HOH A:2037
BINDING SITE FOR RESIDUE 3PP A1226
2
AC2
SOFTWARE
ASN B:12 , LYS B:14 , HIS B:96 , GLU B:144 , ILE B:149 , ALA B:183 , GLY B:184 , LEU B:203 , LEU B:204 , ALA B:205 , SER B:206 , HOH B:2036
BINDING SITE FOR RESIDUE 3PP B1226
3
AC3
SOFTWARE
ASN C:12 , LYS C:14 , HIS C:96 , GLU C:144 , ILE C:149 , ALA C:183 , GLY C:184 , LEU C:204 , ALA C:205 , SER C:206 , HOH C:2004 , HOH C:2048 , HOH C:2052
BINDING SITE FOR RESIDUE 3PP C1226
4
AC4
SOFTWARE
ASN D:12 , LYS D:14 , HIS D:96 , GLU D:144 , ILE D:149 , GLY D:184 , LEU D:203 , LEU D:204 , ALA D:205 , SER D:206 , GLY D:207 , HOH D:2044
BINDING SITE FOR RESIDUE 3PP D1226
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
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PROSITE Patterns/Profiles
(2, 16)
Info
All PROSITE Patterns/Profiles
1: TIM_2 (A:6-220,B:6-220,C:6-220,D:6-220)
2: TIM_1 (A:142-152,B:142-152,C:142-152,D:14...)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
TIM_2
PS51440
Triosephosphate isomerase (TIM) family profile.
TPIS_PYRFU
6-220
4
A:6-220
B:6-220
C:6-220
D:6-220
-
-
-
-
TPIS_PYRWO
6-220
4
A:6-220
B:6-220
C:6-220
D:6-220
-
-
-
-
2
TIM_1
PS00171
Triosephosphate isomerase active site.
TPIS_PYRFU
142-152
4
A:142-152
B:142-152
C:142-152
D:142-152
-
-
-
-
TPIS_PYRWO
142-152
4
A:142-152
B:142-152
C:142-152
D:142-152
-
-
-
-
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Exons
(0, 0)
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(1, 8)
Info
All SCOP Domains
1a: SCOP_d1hg3a_ (A:)
1b: SCOP_d1hg3b_ (B:)
1c: SCOP_d1hg3c_ (C:)
1d: SCOP_d1hg3d_ (D:)
1e: SCOP_d1hg3e_ (E:)
1f: SCOP_d1hg3f_ (F:)
1g: SCOP_d1hg3g_ (G:)
1h: SCOP_d1hg3h_ (H:)
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Protein Domains
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(
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Organisms
(
)
(
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Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
TIM beta/alpha-barrel
(3956)
Superfamily
:
Triosephosphate isomerase (TIM)
(148)
Family
:
Triosephosphate isomerase (TIM)
(128)
Protein domain
:
Triosephosphate isomerase
(126)
Pyrococcus woesei [TaxId: 2262]
(1)
1a
d1hg3a_
A:
1b
d1hg3b_
B:
1c
d1hg3c_
C:
1d
d1hg3d_
D:
1e
d1hg3e_
E:
1f
d1hg3f_
F:
1g
d1hg3g_
G:
1h
d1hg3h_
H:
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CATH Domains
(1, 8)
Info
all CATH domains
1a: CATH_1hg3A00 (A:2-225)
1b: CATH_1hg3B00 (B:2-225)
1c: CATH_1hg3C00 (C:2-225)
1d: CATH_1hg3D00 (D:2-225)
1e: CATH_1hg3E00 (E:2-225)
1f: CATH_1hg3F00 (F:2-225)
1g: CATH_1hg3G00 (G:2-225)
1h: CATH_1hg3H00 (H:2-225)
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Organisms
(
)
(
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Class
:
Alpha Beta
(26913)
Architecture
:
Alpha-Beta Barrel
(2994)
Topology
:
TIM Barrel
(2806)
Homologous Superfamily
:
Aldolase class I
(887)
Pyrococcus woesei. Organism_taxid: 2262.
(1)
1a
1hg3A00
A:2-225
1b
1hg3B00
B:2-225
1c
1hg3C00
C:2-225
1d
1hg3D00
D:2-225
1e
1hg3E00
E:2-225
1f
1hg3F00
F:2-225
1g
1hg3G00
G:2-225
1h
1hg3H00
H:2-225
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Pfam Domains
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Asymmetric Unit 1
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Show PDB file:
Asym.Unit (263 KB)
Header - Asym.Unit
Biol.Unit 1 (131 KB)
Header - Biol.Unit 1
Biol.Unit 2 (131 KB)
Header - Biol.Unit 2
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