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1HCI
Asym. Unit
Info
Asym.Unit (163 KB)
Biol.Unit 1 (161 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF THE ROD DOMAIN OF ALPHA-ACTININ
Authors
:
J. Ylanne, K. Scheffzek, P. Young, M. Saraste
Date
:
04 May 01 (Deposition) - 27 Jun 01 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.80
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Triple-Helix Coiled Coil, Contractile Protein, Muscle, Z- Line, Actin-Binding Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
J. Ylanne, K. Scheffzek, P. Young, M. Saraste
Crystal Structure Of The Alpha-Actinin Rod Reveals An Extensive Torsional Twist
Structure V. 9 597 2001
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Hetero Components
(0, 0)
Info
All Hetero Components
View:
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Label:
Sorry, no Info available
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Sites
(0, 0)
Info
All Sites
View:
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Label:
Sorry, no Info available
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]
SAPs(SNPs)/Variants
(4, 8)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_071971 (T495M, chain A/B, )
2: VAR_071972 (E583A, chain A/B, )
3: VAR_033487 (M604V, chain A/B, )
4: VAR_071973 (E628G, chain A/B, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_071971
T
495
M
ACTN2_HUMAN
Disease (CMH)
---
A/B
T
495
M
2
UniProt
VAR_071972
E
583
A
ACTN2_HUMAN
Disease (CMH)
---
A/B
E
583
A
3
UniProt
VAR_033487
M
604
V
ACTN2_HUMAN
Polymorphism
35997569
A/B
M
604
V
4
UniProt
VAR_071973
E
628
G
ACTN2_HUMAN
Disease (CMH)
---
A/B
E
628
G
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(0, 0)
Info
All PROSITE Patterns/Profiles
;
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End label:
Sorry, no Info available
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Exons
(10, 20)
Info
All Exons
Exon 1.10b (A:272-292 | B:272-292)
Exon 1.11 (A:293-369 | B:293-369)
Exon 1.12b (A:370-419 | B:370-419)
Exon 1.13b (A:419-469 | B:419-469)
Exon 1.14a (A:469-505 | B:469-505)
Exon 1.16 (A:506-552 | B:506-552)
Exon 1.17 (A:553-613 | B:553-613)
Exon 1.18b (A:614-658 | B:614-658)
Exon 1.19 (A:659-718 | B:659-718)
Exon 1.20 (A:719-746 | B:719-746)
View:
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All Exon Boundaries
01: Boundary 1.9/1.10b
02: Boundary 1.10b/1.11
03: Boundary 1.11/1.12b
04: Boundary 1.12b/1.13b
05: Boundary 1.13b/1.14a
06: Boundary 1.14a/1.16
07: Boundary 1.16/1.17
08: Boundary 1.17/1.18b
09: Boundary 1.18b/1.19
10: Boundary 1.19/1.20
11: Boundary 1.20/1.21
View:
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1a
ENST00000366578
1a
ENSE00001442093
chr1:
236849808-236850099
292
ACTN2_HUMAN
1-42
42
0
-
-
1.2
ENST00000366578
2
ENSE00001621874
chr1:
236881158-236881272
115
ACTN2_HUMAN
43-81
39
0
-
-
1.3
ENST00000366578
3
ENSE00001769920
chr1:
236882194-236882313
120
ACTN2_HUMAN
81-121
41
0
-
-
1.4
ENST00000366578
4
ENSE00001713666
chr1:
236883405-236883491
87
ACTN2_HUMAN
121-150
30
0
-
-
1.5
ENST00000366578
5
ENSE00000550946
chr1:
236889233-236889320
88
ACTN2_HUMAN
150-179
30
0
-
-
1.6
ENST00000366578
6
ENSE00000793525
chr1:
236890978-236891056
79
ACTN2_HUMAN
179-205
27
0
-
-
1.7
ENST00000366578
7
ENSE00001069619
chr1:
236894533-236894614
82
ACTN2_HUMAN
206-233
28
0
-
-
1.9
ENST00000366578
9
ENSE00001069620
chr1:
236898935-236899020
86
ACTN2_HUMAN
233-261
29
0
-
-
1.10b
ENST00000366578
10b
ENSE00000908069
chr1:
236900422-236900514
93
ACTN2_HUMAN
262-292
31
2
A:272-292
B:272-292
21
21
1.11
ENST00000366578
11
ENSE00001688862
chr1:
236902602-236902832
231
ACTN2_HUMAN
293-369
77
2
A:293-369
B:293-369
77
77
1.12b
ENST00000366578
12b
ENSE00000908073
chr1:
236906196-236906343
148
ACTN2_HUMAN
370-419
50
2
A:370-419
B:370-419
50
50
1.13b
ENST00000366578
13b
ENSE00000908075
chr1:
236907926-236908076
151
ACTN2_HUMAN
419-469
51
2
A:419-469
B:419-469
51
51
1.14a
ENST00000366578
14a
ENSE00000908076
chr1:
236910967-236911075
109
ACTN2_HUMAN
469-505
37
2
A:469-505
B:469-505
37
37
1.16
ENST00000366578
16
ENSE00000908079
chr1:
236912424-236912564
141
ACTN2_HUMAN
506-552
47
2
A:506-552
B:506-552
47
47
1.17
ENST00000366578
17
ENSE00000908080
chr1:
236914770-236914952
183
ACTN2_HUMAN
553-613
61
2
A:553-613
B:553-613
61
61
1.18b
ENST00000366578
18b
ENSE00000908082
chr1:
236917247-236917381
135
ACTN2_HUMAN
614-658
45
2
A:614-658
B:614-658
45
45
1.19
ENST00000366578
19
ENSE00001668883
chr1:
236918319-236918498
180
ACTN2_HUMAN
659-718
60
2
A:659-718
B:659-718
60
60
1.20
ENST00000366578
20
ENSE00001671667
chr1:
236920786-236920932
147
ACTN2_HUMAN
719-767
49
2
A:719-746
B:719-746
28
28
1.21
ENST00000366578
21
ENSE00000793541
chr1:
236923024-236923089
66
ACTN2_HUMAN
768-789
22
0
-
-
1.22
ENST00000366578
22
ENSE00000793542
chr1:
236924315-236924473
159
ACTN2_HUMAN
790-842
53
0
-
-
1.23b
ENST00000366578
23b
ENSE00001442092
chr1:
236925761-236927931
2171
ACTN2_HUMAN
843-894
52
0
-
-
[
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SCOP Domains
(1, 8)
Info
All SCOP Domains
1a: SCOP_d1hcia1 (A:272-396)
1b: SCOP_d1hcia2 (A:397-511)
1c: SCOP_d1hcia3 (A:512-632)
1d: SCOP_d1hcia4 (A:633-746)
1e: SCOP_d1hcib1 (B:272-396)
1f: SCOP_d1hcib2 (B:397-511)
1g: SCOP_d1hcib3 (B:512-632)
1h: SCOP_d1hcib4 (B:633-746)
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Organisms
(
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(
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Class
:
All alpha proteins
(14657)
Fold
:
Spectrin repeat-like
(186)
Superfamily
:
Spectrin repeat
(10)
Family
:
Spectrin repeat
(9)
Protein domain
:
alpha-actinin
(2)
Human (Homo sapiens) [TaxId: 9606]
(2)
1a
d1hcia1
A:272-396
1b
d1hcia2
A:397-511
1c
d1hcia3
A:512-632
1d
d1hcia4
A:633-746
1e
d1hcib1
B:272-396
1f
d1hcib2
B:397-511
1g
d1hcib3
B:512-632
1h
d1hcib4
B:633-746
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CATH Domains
(1, 8)
Info
all CATH domains
1a: CATH_1hciA03 (A:513-632)
1b: CATH_1hciA01 (A:272-397)
1c: CATH_1hciB01 (B:272-397)
1d: CATH_1hciB03 (B:513-632)
1e: CATH_1hciA04 (A:633-746)
1f: CATH_1hciB04 (B:633-746)
1g: CATH_1hciA02 (A:398-512)
1h: CATH_1hciB02 (B:398-512)
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)
Organisms
(
)
(
)
Class
:
Mainly Alpha
(13335)
Architecture
:
Up-down Bundle
(3216)
Topology
:
Methane Monooxygenase Hydroxylase; Chain G, domain 1
(192)
Homologous Superfamily
:
[code=1.20.58.60, no name defined]
(10)
Human (Homo sapiens)
(5)
1a
1hciA03
A:513-632
1b
1hciA01
A:272-397
1c
1hciB01
B:272-397
1d
1hciB03
B:513-632
1e
1hciA04
A:633-746
1f
1hciB04
B:633-746
1g
1hciA02
A:398-512
1h
1hciB02
B:398-512
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Pfam Domains
(0, 0)
Info
all PFAM domains
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