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1HBN
Asym. Unit
Info
Asym.Unit (896 KB)
Biol.Unit 1 (882 KB)
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(1)
Title
:
METHYL-COENZYME M REDUCTASE
Authors
:
U. Ermler, W. Grabarse
Date
:
20 Apr 01 (Deposition) - 16 Aug 01 (Release) - 21 Jun 17 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.16
Chains
:
Asym. Unit : A,B,C,D,E,F
Biol. Unit 1: A,B,C,D,E,F (1x)
Keywords
:
Methanogenesis, Biological Methanogenesis, Ni-Enzyme, Oxidoreductase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
W. Grabarse, F. Mahlert, E. C. Duin, M. Goubeaud, S. Shima, R. K. Thauer V. Lamzin, U. Ermler
On The Mechanism Of Biological Methane Formation: Structura Evidence For Conformational Changes In Methyl-Coenzyme M Reductase Upon Substrate Binding
J. Mol. Biol. V. 309 315 2001
[
close entry info
]
Hetero Components
(13, 58)
Info
All Hetero Components
01a: 5-METHYL-ARGININE (AGMa)
01b: 5-METHYL-ARGININE (AGMb)
02a: CHLORIDE ION (CLa)
02b: CHLORIDE ION (CLb)
03a: 1-THIOETHANESULFONIC ACID (COMa)
03b: 1-THIOETHANESULFONIC ACID (COMb)
04a: FACTOR 430 (F43a)
04b: FACTOR 430 (F43b)
05a: THIOGLYCIN (GL3a)
05b: THIOGLYCIN (GL3b)
06a: GLYCEROL (GOLa)
06b: GLYCEROL (GOLb)
06c: GLYCEROL (GOLc)
06d: GLYCEROL (GOLd)
06e: GLYCEROL (GOLe)
06f: GLYCEROL (GOLf)
06g: GLYCEROL (GOLg)
06h: GLYCEROL (GOLh)
06i: GLYCEROL (GOLi)
06j: GLYCEROL (GOLj)
06k: GLYCEROL (GOLk)
08a: 2-METHYL-GLUTAMINE (MGNa)
08b: 2-METHYL-GLUTAMINE (MGNb)
07a: MAGNESIUM ION (MGa)
07b: MAGNESIUM ION (MGb)
07c: MAGNESIUM ION (MGc)
07d: MAGNESIUM ION (MGd)
07e: MAGNESIUM ION (MGe)
07f: MAGNESIUM ION (MGf)
07g: MAGNESIUM ION (MGg)
07h: MAGNESIUM ION (MGh)
07i: MAGNESIUM ION (MGi)
07j: MAGNESIUM ION (MGj)
07k: MAGNESIUM ION (MGk)
07l: MAGNESIUM ION (MGl)
07m: MAGNESIUM ION (MGm)
07n: MAGNESIUM ION (MGn)
08o: MAGNESIUM ION (MGo)
08p: MAGNESIUM ION (MGp)
08q: MAGNESIUM ION (MGq)
08r: MAGNESIUM ION (MGr)
09a: N1-METHYLATED HISTIDINE (MHSa)
09b: N1-METHYLATED HISTIDINE (MHSb)
10a: SODIUM ION (NAa)
10b: SODIUM ION (NAb)
10c: SODIUM ION (NAc)
10d: SODIUM ION (NAd)
10e: SODIUM ION (NAe)
10f: SODIUM ION (NAf)
10g: SODIUM ION (NAg)
10h: SODIUM ION (NAh)
10i: SODIUM ION (NAi)
10j: SODIUM ION (NAj)
11a: S-METHYLCYSTEINE (SMCa)
11b: S-METHYLCYSTEINE (SMCb)
12a: COENZYME B (TP7a)
12b: COENZYME B (TP7b)
13a: ZINC ION (ZNa)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
AGM
2
Mod. Amino Acid
5-METHYL-ARGININE
2
CL
2
Ligand/Ion
CHLORIDE ION
3
COM
2
Ligand/Ion
1-THIOETHANESULFONIC ACID
4
F43
2
Ligand/Ion
FACTOR 430
5
GL3
2
Mod. Amino Acid
THIOGLYCIN
6
GOL
11
Ligand/Ion
GLYCEROL
7
MG
18
Ligand/Ion
MAGNESIUM ION
8
MGN
2
Mod. Amino Acid
2-METHYL-GLUTAMINE
9
MHS
2
Mod. Amino Acid
N1-METHYLATED HISTIDINE
10
NA
10
Ligand/Ion
SODIUM ION
11
SMC
2
Mod. Amino Acid
S-METHYLCYSTEINE
12
TP7
2
Ligand/Ion
COENZYME B
13
ZN
1
Ligand/Ion
ZINC ION
[
close Hetero Component info
]
Sites
(48, 48)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
21: CC3 (SOFTWARE)
22: CC4 (SOFTWARE)
23: CC5 (SOFTWARE)
24: CC6 (SOFTWARE)
25: CC7 (SOFTWARE)
26: CC8 (SOFTWARE)
27: CC9 (SOFTWARE)
28: DC1 (SOFTWARE)
29: DC2 (SOFTWARE)
30: DC3 (SOFTWARE)
31: DC4 (SOFTWARE)
32: DC5 (SOFTWARE)
33: DC6 (SOFTWARE)
34: DC7 (SOFTWARE)
35: DC8 (SOFTWARE)
36: DC9 (SOFTWARE)
37: EC1 (SOFTWARE)
38: EC2 (SOFTWARE)
39: EC3 (SOFTWARE)
40: EC4 (SOFTWARE)
41: EC5 (SOFTWARE)
42: EC6 (SOFTWARE)
43: EC7 (SOFTWARE)
44: EC8 (SOFTWARE)
45: EC9 (SOFTWARE)
46: FC1 (SOFTWARE)
47: FC2 (SOFTWARE)
48: FC3 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ARG A:102 , SER A:215 , ARG A:216 , CYS A:218 , ARG D:102 , SER D:215 , ARG D:216 , CYS D:218
BINDING SITE FOR RESIDUE ZN A 1557
02
AC2
SOFTWARE
GLU A:117 , VAL A:124 , HOH A:2192 , HOH A:2193
BINDING SITE FOR RESIDUE MG A 1558
03
AC3
SOFTWARE
LYS A:11 , PHE A:14 , HOH A:2028 , HOH A:2029 , HOH A:2037 , HOH A:2050
BINDING SITE FOR RESIDUE NA A 1559
04
AC4
SOFTWARE
GOL A:1553 , HOH A:2487 , ARG D:270 , HOH D:2314 , HOH D:2501
BINDING SITE FOR RESIDUE NA A 1560
05
AC5
SOFTWARE
ALA A:544 , THR A:547 , PRO A:548 , HOH A:2467 , HOH A:2472
BINDING SITE FOR RESIDUE NA A 1561
06
AC6
SOFTWARE
PRO A:58 , ILE A:60 , THR A:62 , HOH A:2126 , HOH A:2129 , HOH D:2200
BINDING SITE FOR RESIDUE NA A 1562
07
AC7
SOFTWARE
HOH A:2230 , HOH A:2432 , HOH D:2049
BINDING SITE FOR RESIDUE MG A 1563
08
AC8
SOFTWARE
HOH A:2227 , HOH A:2228
BINDING SITE FOR RESIDUE MG A 1564
09
AC9
SOFTWARE
HOH A:2048 , HOH A:2065
BINDING SITE FOR RESIDUE MG A 1565
10
BC1
SOFTWARE
HOH A:2019 , HOH A:2021 , HOH A:2022 , HOH A:2044 , HOH A:2066
BINDING SITE FOR RESIDUE MG A 1566
11
BC2
SOFTWARE
HOH A:2027 , HOH A:2061 , HOH A:2201 , HOH A:2380
BINDING SITE FOR RESIDUE NA A 1567
12
BC3
SOFTWARE
HOH A:2118 , ASN B:441 , HOH B:2419 , HOH D:2230 , HOH D:2231
BINDING SITE FOR RESIDUE NA B 1445
13
BC4
SOFTWARE
ARG B:235 , ALA B:300 , HOH B:2126 , HOH B:2283 , HOH B:2349
BINDING SITE FOR RESIDUE CL B 1446
14
BC5
SOFTWARE
ASP B:271 , HOH B:2312 , HOH B:2314 , HOH B:2316 , HOH B:2317
BINDING SITE FOR RESIDUE MG B 1447
15
BC6
SOFTWARE
ASP B:99 , THR B:101 , HOH B:2139 , HOH B:2154 , HOH B:2162 , HOH B:2164
BINDING SITE FOR RESIDUE NA B 1448
16
BC7
SOFTWARE
HOH B:2068 , HOH B:2170 , HOH B:2171 , HOH B:2401
BINDING SITE FOR RESIDUE MG B 1449
17
BC8
SOFTWARE
GLU C:30 , HOH C:2062 , HOH C:2066 , HOH C:2172 , HOH C:2179 , HOH F:2049
BINDING SITE FOR RESIDUE MG C 1250
18
BC9
SOFTWARE
HOH C:2073 , HOH F:2222
BINDING SITE FOR RESIDUE MG C 1251
19
CC1
SOFTWARE
GLU D:175 , HOH D:2121 , HOH D:2223 , HOH D:2226 , HOH D:2227
BINDING SITE FOR RESIDUE MG D 1557
20
CC2
SOFTWARE
ASP D:356
BINDING SITE FOR RESIDUE MG D 1558
21
CC3
SOFTWARE
LYS D:11 , PHE D:14 , HOH D:2013 , HOH D:2014 , HOH D:2023 , HOH D:2028
BINDING SITE FOR RESIDUE NA D 1559
22
CC4
SOFTWARE
ARG A:270 , HOH A:2302 , HOH A:2481 , GOL D:1554 , HOH D:2507
BINDING SITE FOR RESIDUE NA D 1560
23
CC5
SOFTWARE
HOH A:2206 , PRO D:58 , ILE D:60 , THR D:62 , HOH D:2113 , HOH D:2115
BINDING SITE FOR RESIDUE NA D 1561
24
CC6
SOFTWARE
ARG E:235
BINDING SITE FOR RESIDUE CL E 1445
25
CC7
SOFTWARE
ASP E:271 , HOH E:2305 , HOH E:2308 , HOH E:2309
BINDING SITE FOR RESIDUE MG E 1446
26
CC8
SOFTWARE
ASP E:147 , HOH E:2079 , HOH E:2205 , HOH E:2206 , HOH E:2208
BINDING SITE FOR RESIDUE MG E 1447
27
CC9
SOFTWARE
HOH E:2013 , HOH E:2015 , HOH E:2390 , HOH F:2106
BINDING SITE FOR RESIDUE MG E 1448
28
DC1
SOFTWARE
HOH E:2035 , HOH E:2036 , HOH E:2120 , HOH E:2121
BINDING SITE FOR RESIDUE MG E 1449
29
DC2
SOFTWARE
HOH E:2138 , HOH E:2164
BINDING SITE FOR RESIDUE MG E 1450
30
DC3
SOFTWARE
HOH C:2056 , GLU F:30 , HOH F:2022 , HOH F:2057 , HOH F:2060 , HOH F:2169
BINDING SITE FOR RESIDUE MG F 1249
31
DC4
SOFTWARE
GLU F:34 , ASP F:35 , LYS F:38 , HOH F:2061
BINDING SITE FOR RESIDUE MG F 1250
32
DC5
SOFTWARE
GLY A:326 , GLY A:327 , VAL A:328 , GLY A:329 , PHE A:330 , THR A:331 , GLN A:332 , TYR A:333 , PHE A:396 , GLY A:397 , GLY A:442 , PHE A:443 , COM A:1552 , HOH A:2384 , HOH A:2476 , HOH A:2477 , HOH A:2478 , HOH A:2479 , HOH A:2480 , SER B:365 , ILE B:366 , TYR B:367 , LEU C:117 , SER C:118 , GLY C:119 , LYS C:153 , SER C:154 , VAL C:155 , HIS C:156 , HIS C:158 , HOH C:2189 , ALA D:144 , VAL D:145 , VAL D:146 , GLN D:147 , GLN D:230 , MET D:233 , ALA D:243 , HOH D:2288
BINDING SITE FOR RESIDUE F43 A 1550
33
DC6
SOFTWARE
ARG A:270 , LEU A:320 , MET A:324 , PHE A:443 , MET A:480 , ASN A:481 , VAL A:482 , HOH A:2481 , HOH A:2482 , HOH A:2483 , HOH A:2484 , HOH A:2485 , TYR B:367 , GLY B:369 , HIS B:379 , ILE B:380 , ARG D:225 , LYS D:256 , MHS D:257
BINDING SITE FOR RESIDUE TP7 A 1551
34
DC7
SOFTWARE
TYR A:333 , PHE A:443 , TYR A:444 , F43 A:1550 , HOH A:2486 , PHE B:361 , SER B:365 , TYR B:367 , LEU C:117 , ARG C:120
BINDING SITE FOR RESIDUE COM A 1552
35
DC8
SOFTWARE
ALA A:144 , VAL A:145 , VAL A:146 , GLN A:147 , GLN A:230 , MET A:233 , ALA A:243 , HOH A:2276 , GLY D:326 , GLY D:327 , VAL D:328 , GLY D:329 , PHE D:330 , THR D:331 , GLN D:332 , TYR D:333 , PHE D:396 , GLY D:397 , GLY D:442 , PHE D:443 , COM D:1552 , HOH D:2400 , HOH D:2494 , HOH D:2495 , HOH D:2496 , HOH D:2497 , HOH D:2498 , SER E:365 , ILE E:366 , TYR E:367 , LEU F:117 , SER F:118 , GLY F:119 , LYS F:153 , SER F:154 , VAL F:155 , HIS F:156 , HIS F:158 , HOH F:2179
BINDING SITE FOR RESIDUE F43 D 1550
36
DC9
SOFTWARE
ARG A:225 , LYS A:256 , MHS A:257 , ARG D:270 , LEU D:320 , MET D:324 , PHE D:443 , MET D:480 , ASN D:481 , VAL D:482 , HOH D:2499 , HOH D:2500 , HOH D:2501 , HOH D:2502 , HOH D:2503 , TYR E:367 , GLY E:369 , HIS E:379 , ILE E:380
BINDING SITE FOR RESIDUE TP7 D 1551
37
EC1
SOFTWARE
TYR D:333 , PHE D:443 , TYR D:444 , F43 D:1550 , HOH D:2504 , PHE E:361 , SER E:365 , TYR E:367 , LEU F:117 , ARG F:120
BINDING SITE FOR RESIDUE COM D 1552
38
EC2
SOFTWARE
SER A:224 , LYS A:256 , HIS A:262 , GLU A:275 , NA A:1560 , HOH D:2314
BINDING SITE FOR RESIDUE GOL A 1553
39
EC3
SOFTWARE
ASP A:170 , ALA A:173 , ASP A:174 , ASP A:183 , ASN A:185 , HOH A:2236 , HOH A:2488
BINDING SITE FOR RESIDUE GOL A 1554
40
EC4
SOFTWARE
LYS A:531 , PHE A:537 , GLU A:538 , HOH A:2449 , HOH A:2450
BINDING SITE FOR RESIDUE GOL A 1555
41
EC5
SOFTWARE
LYS A:4 , ASP A:345 , TYR A:348 , GLU A:352 , TYR A:380 , HOH A:2008
BINDING SITE FOR RESIDUE GOL A 1556
42
EC6
SOFTWARE
GLU B:25 , SER B:28 , LEU B:30 , ARG B:31 , GLU B:234 , HOH B:2422 , VAL E:95
BINDING SITE FOR RESIDUE GOL B 1444
43
EC7
SOFTWARE
TYR C:109 , ARG C:110 , ASP C:129 , HOH C:2154 , HOH C:2292 , HOH C:2293 , HOH C:2294
BINDING SITE FOR RESIDUE GOL C 1249
44
EC8
SOFTWARE
ASP D:170 , ALA D:173 , ASP D:174 , ASP D:183 , ASN D:185 , HOH D:2239 , HOH D:2505 , HOH D:2506
BINDING SITE FOR RESIDUE GOL D 1553
45
EC9
SOFTWARE
HOH A:2481 , SER D:224 , LYS D:256 , MHS D:257 , HIS D:262 , GLU D:275 , NA D:1560
BINDING SITE FOR RESIDUE GOL D 1554
46
FC1
SOFTWARE
GLN D:291 , ARG D:294 , PHE D:513 , ASP D:515 , PHE D:520 , ASP D:521 , PHE D:522
BINDING SITE FOR RESIDUE GOL D 1555
47
FC2
SOFTWARE
ASP D:345 , GLU D:352 , TYR D:380 , HOH D:2001 , HOH D:2510
BINDING SITE FOR RESIDUE GOL D 1556
48
FC3
SOFTWARE
VAL B:95 , LYS E:3 , GLU E:25 , SER E:28 , LEU E:30 , ARG E:31 , GLU E:234
BINDING SITE FOR RESIDUE GOL E 1444
[
close Site info
]
SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
View:
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Sorry, no Info available
[
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]
PROSITE Patterns/Profiles
(0, 0)
Info
All PROSITE Patterns/Profiles
;
View:
Select:
Label:
End label:
Sorry, no Info available
[
close PROSITE info
]
Exons
(0, 0)
Info
All Exons
View:
Select:
Label:
All Exon Boundaries
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(5, 10)
Info
All SCOP Domains
1a: SCOP_d1hbna1 (A:270-549)
1b: SCOP_d1hbnd1 (D:270-549)
2a: SCOP_d1hbnb1 (B:189-443)
2b: SCOP_d1hbne1 (E:189-443)
3a: SCOP_d1hbna2 (A:2-269)
3b: SCOP_d1hbnd2 (D:2-269)
4a: SCOP_d1hbnb2 (B:2-188)
4b: SCOP_d1hbne2 (E:2-188)
5a: SCOP_d1hbnc_ (C:)
5b: SCOP_d1hbnf_ (F:)
View:
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Classes
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)
(
)
Folds
(
)
(
)
Superfamilies
(
)
(
)
Families
(
)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All alpha proteins
(14657)
Fold
:
Methyl-coenzyme M reductase alpha and beta chain C-terminal domain
(28)
Superfamily
:
Methyl-coenzyme M reductase alpha and beta chain C-terminal domain
(28)
Family
:
Methyl-coenzyme M reductase alpha and beta chain C-terminal domain
(26)
Protein domain
:
Alpha chain
(13)
Methanobacterium thermoautotrophicum [TaxId: 145262]
(11)
1a
d1hbna1
A:270-549
1b
d1hbnd1
D:270-549
Protein domain
:
Beta chain
(13)
Methanobacterium thermoautotrophicum [TaxId: 145262]
(11)
2a
d1hbnb1
B:189-443
2b
d1hbne1
E:189-443
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Ferredoxin-like
(1795)
Superfamily
:
Methyl-coenzyme M reductase subunits
(42)
Family
:
Methyl-coenzyme M reductase alpha and beta chain N-terminal domain
(26)
Protein domain
:
Alpha chain
(13)
Methanobacterium thermoautotrophicum [TaxId: 145262]
(11)
3a
d1hbna2
A:2-269
3b
d1hbnd2
D:2-269
Protein domain
:
Beta chain
(13)
Methanobacterium thermoautotrophicum [TaxId: 145262]
(11)
4a
d1hbnb2
B:2-188
4b
d1hbne2
E:2-188
Family
:
Methyl-coenzyme M reductase gamma chain
(14)
Protein domain
:
Methyl-coenzyme M reductase gamma chain
(14)
Methanobacterium thermoautotrophicum [TaxId: 145262]
(12)
5a
d1hbnc_
C:
5b
d1hbnf_
F:
[
close SCOP info
]
CATH Domains
(4, 12)
Info
all CATH domains
1a: CATH_1hbnA02 (A:102-276)
1b: CATH_1hbnD02 (D:102-276)
1c: CATH_1hbnB01 (B:45-191)
1d: CATH_1hbnE01 (E:45-191)
2a: CATH_1hbnC00 (C:2-248)
2b: CATH_1hbnF00 (F:2-248)
3a: CATH_1hbnA01 (A:3-101)
3b: CATH_1hbnD01 (D:3-101)
4a: CATH_1hbnA03 (A:277-536)
4b: CATH_1hbnD03 (D:277-536)
4c: CATH_1hbnB02 (B:2-44,B:192-443)
4d: CATH_1hbnE02 (E:2-44,E:192-443)
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Architectures
(
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(
)
Topologies
(
)
(
)
Homologous Superfamilies
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
2-Layer Sandwich
(8480)
Topology
:
Alpha-Beta Plaits
(1688)
Homologous Superfamily
:
[code=3.30.70.470, no name defined]
(7)
Methanothermobacter thermautotrophicus. Organism_taxid: 145262. Strain: marburg.
(3)
1a
1hbnA02
A:102-276
1b
1hbnD02
D:102-276
1c
1hbnB01
B:45-191
1d
1hbnE01
E:45-191
Architecture
:
Alpha-Beta Complex
(3881)
Topology
:
Lambda Exonuclease; Chain A
(10)
Homologous Superfamily
:
[code=3.90.320.20, no name defined]
(7)
Methanothermobacter thermautotrophicus. Organism_taxid: 145262. Strain: marburg.
(3)
2a
1hbnC00
C:2-248
2b
1hbnF00
F:2-248
Topology
:
Methyl-coenzyme M Reductase; Chain A, domain 1
(7)
Homologous Superfamily
:
Methyl-coenzyme M Reductase; Chain A, domain 1
(7)
Methanothermobacter thermautotrophicus. Organism_taxid: 145262. Strain: marburg.
(3)
3a
1hbnA01
A:3-101
3b
1hbnD01
D:3-101
Class
:
Mainly Alpha
(13335)
Architecture
:
Up-down Bundle
(3216)
Topology
:
Methyl-coenzyme M Reductase; Chain B, domain 2
(7)
Homologous Superfamily
:
Methyl-coenzyme M Reductase; Chain B, domain 2
(7)
Methanothermobacter thermautotrophicus. Organism_taxid: 145262. Strain: marburg.
(3)
4a
1hbnA03
A:277-536
4b
1hbnD03
D:277-536
4c
1hbnB02
B:2-44,B:192-443
4d
1hbnE02
E:2-44,E:192-443
[
close CATH info
]
Pfam Domains
(0, 0)
Info
all PFAM domains
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Select:
Label:
Sorry, no Info available
[
close Pfam info
]
Atom Selection
(currently selected atoms:
all
)
Protein
Nucleic
Backbone
Sidechain
Hetero
Ligand
Solvent
All Atoms
Protein & NOT Variant
Protein & NOT Site
Protein & NOT PROSITE
Chain A
Chain B
Chain C
Chain D
Chain E
Chain F
Asymmetric Unit 1
Rendering
(selected part)
Molecule Coloring
(selected part)
by Chain (Asym. Unit)
by Chain (Biol. Unit)
by Secondary Structure
by Atom (CPK)
by SCOP Domain
by CATH Domain
by Pfam Domain
by Asymmetric Unit
by Exon
by Amino Acid
by Nucleotide
by Temperature
by Charge
by Rainbow (Group)
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(e.g.: "#3cb371" or "60,179,113")
Stereo
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Miscellaneous
Script
Example Commands
Example Command
Action
select :A, :C
select chains 'A' and 'C'
select [ALA]:A
select all 'ALA' residues (Alanines) in chain 'A'
select 5-10
select residue range 5 to 10 in all chains
select 5-10:A
select residue range 5 to 10 in chain 'A'
select protein & not helix & not sheet
select non-helix/non-sheet protein parts
set fontsize 20
set label size to 20 (allowed range: 1-58)
ssbonds 100
show SS bonds with a radius of 100 units (=0.4Å)
wireframe 100
show bonds with a radius of 100 units (=0.4Å)
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close Script example commands
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Log
Note:
In this "Basic Interface" any change in the selection of a pulldown menu automatically triggers an action (one-step mechanism).
View and selection are coupled in the structure specific controls (e.g. "Hetero","PROSITE") .
Note:
In this "Advanced Interface" any change in the selection of a pulldown menu only sets the target for the corresponding control buttons (two-step mechanism).
View and selection are set independently in the structure specific controls (e.g. "Hetero","PROSITE") .
QuickSearch:
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Asym.Unit (896 KB)
Header - Asym.Unit
Biol.Unit 1 (882 KB)
Header - Biol.Unit 1
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