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1HA0
Biol. Unit 1
Info
Asym.Unit (91 KB)
Biol.Unit 1 (248 KB)
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(1)
Title
:
HEMAGGLUTININ PRECURSOR HA0
Authors
:
J. Chen, K. Ho Lee, D. A. Steinhauer, D. J. Stevens, J. J. Skehel, D. C. Wi
Date
:
08 Oct 98 (Deposition) - 12 Oct 98 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.80
Chains
:
Asym. Unit : A
Biol. Unit 1: A (3x)
Keywords
:
Glycoprotein, Membrane-Fusion Precursor, Virus/Viral Protein, Viral Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
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)
Reference
:
J. Chen, K. H. Lee, D. A. Steinhauer, D. J. Stevens, J. J. Skehel, D. C. Wiley
Structure Of The Hemagglutinin Precursor Cleavage Site, A Determinant Of Influenza Pathogenicity And The Origin Of Th Labile Conformation.
Cell(Cambridge, Mass. ) V. 95 409 1998
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Hetero Components
(3, 33)
Info
All Hetero Components
1a: BETA-D-MANNOSE (BMAa)
1b: BETA-D-MANNOSE (BMAb)
2a: ALPHA-D-MANNOSE (MANa)
3a: N-ACETYL-D-GLUCOSAMINE (NAGa)
3b: N-ACETYL-D-GLUCOSAMINE (NAGb)
3c: N-ACETYL-D-GLUCOSAMINE (NAGc)
3d: N-ACETYL-D-GLUCOSAMINE (NAGd)
3e: N-ACETYL-D-GLUCOSAMINE (NAGe)
3f: N-ACETYL-D-GLUCOSAMINE (NAGf)
3g: N-ACETYL-D-GLUCOSAMINE (NAGg)
3h: N-ACETYL-D-GLUCOSAMINE (NAGh)
View:
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Label:
No.
Name
Count
Type
Full Name
1
BMA
6
Ligand/Ion
BETA-D-MANNOSE
2
MAN
3
Ligand/Ion
ALPHA-D-MANNOSE
3
NAG
24
Ligand/Ion
N-ACETYL-D-GLUCOSAMINE
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Sites
(11, 11)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
View:
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ASN A:22 , HOH A:1471
BINDING SITE FOR RESIDUE NAG A 1420
02
AC2
SOFTWARE
ASN A:38 , THR A:318 , NAG A:1431
BINDING SITE FOR RESIDUE NAG A 1430
03
AC3
SOFTWARE
NAG A:1430 , BMA A:1432
BINDING SITE FOR RESIDUE NAG A 1431
04
AC4
SOFTWARE
NAG A:1431
BINDING SITE FOR RESIDUE BMA A 1432
05
AC5
SOFTWARE
ASN A:81 , PHE A:120 , GLN A:329
BINDING SITE FOR RESIDUE NAG A 1440
06
AC6
SOFTWARE
ASN A:165 , THR A:167 , SER A:219 , NAG A:1451
BINDING SITE FOR RESIDUE NAG A 1450
07
AC7
SOFTWARE
TRP A:222 , NAG A:1450 , BMA A:1452
BINDING SITE FOR RESIDUE NAG A 1451
08
AC8
SOFTWARE
TRP A:222 , NAG A:1451
BINDING SITE FOR RESIDUE BMA A 1452
09
AC9
SOFTWARE
SER A:45 , ASN A:285 , VAL A:297 , NAG A:1461
BINDING SITE FOR RESIDUE NAG A 1460
10
BC1
SOFTWARE
NAG A:1460 , MAN A:1462
BINDING SITE FOR RESIDUE NAG A 1461
11
BC2
SOFTWARE
NAG A:1461
BINDING SITE FOR RESIDUE MAN A 1462
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
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Exons
(0, 0)
Info
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All Exon Boundaries
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(2, 2)
Info
All SCOP Domains
1a: SCOP_d1ha0a1 (A:9-329)
2a: SCOP_d1ha0a2 (A:330-502)
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Folds
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Families
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Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All beta proteins
(24004)
Fold
:
Viral protein domain
(195)
Superfamily
:
Viral protein domain
(195)
Family
:
Influenza hemagglutinin headpiece
(152)
Protein domain
:
Hemagglutinin
(109)
Influenza A virus, different strains [TaxId: 11320]
(97)
1a
d1ha0a1
A:9-329
Class
:
Coiled coil proteins
(689)
Fold
:
Stalk segment of viral fusion proteins
(231)
Superfamily
:
Influenza hemagglutinin (stalk)
(172)
Family
:
Influenza hemagglutinin (stalk)
(161)
Protein domain
:
Influenza hemagglutinin (stalk)
(102)
Influenza A virus, different strains [TaxId: 11320]
(93)
2a
d1ha0a2
A:330-502
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CATH Domains
(2, 2)
Info
all CATH domains
1a: CATH_1ha0A01 (A:57-272)
2a: CATH_1ha0A02 (A:9-56,A:273-502)
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Classes
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Architectures
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Topologies
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)
Homologous Superfamilies
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
Alpha-Beta Complex
(3881)
Topology
:
Hemagglutinin (Ha1 Chain); Chain: A; domain 1
(59)
Homologous Superfamily
:
[code=3.90.209.20, no name defined]
(59)
Influenza a virus. Organism_taxid: 11320. Strain: cv-1.
(1)
1a
1ha0A01
A:57-272
Topology
:
Hemagglutinin Ectodomain; Chain B
(70)
Homologous Superfamily
:
[code=3.90.20.10, no name defined]
(69)
Influenza a virus. Organism_taxid: 11320. Strain: cv-1.
(1)
2a
1ha0A02
A:9-56,A:273-502
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Pfam Domains
(0, 0)
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all PFAM domains
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Chain A
Asymmetric Unit 1
Asymmetric Unit 2
Asymmetric Unit 3
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Asym.Unit (91 KB)
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Header - Biol.Unit 1
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