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1H6K
Biol. Unit 2
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Asym.Unit (426 KB)
Biol.Unit 1 (146 KB)
Biol.Unit 2 (148 KB)
Biol.Unit 3 (147 KB)
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(1)
Title
:
NUCLEAR CAP BINDING COMPLEX
Authors
:
C. Mazza, M. Ohno, A. Segref, I. W. Mattaj, S. Cusack
Date
:
18 Jun 01 (Deposition) - 13 Sep 01 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.00
Chains
:
Asym. Unit : A,B,C,X,Y,Z
Biol. Unit 1: A,X (1x)
Biol. Unit 2: B,Y (1x)
Biol. Unit 3: C,Z (1x)
Keywords
:
M7G Cap, Cap-Binding-Complex, Rnp Domain, Mif4G Domain, Rna Maturation, Rna Export, Crystal Structure, Nuclear Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
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Reference
:
C. Mazza, M. Ohno, A. Segref, I. W. Mattaj, S. Cusack
Crystal Structure Of The Human Nuclear Cap Binding Complex
Mol. Cell V. 8 383 2001
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Hetero Components
(0, 0)
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Sites
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SAPs(SNPs)/Variants
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PROSITE Patterns/Profiles
(1, 1)
Info
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1: RRM (Y:40-117)
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
RRM
PS50102
Eukaryotic RNA Recognition Motif (RRM) profile.
NCBP2_HUMAN
40-118
1
-
Y:40-117
-
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Exons
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
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SCOP Domains
(2, 12)
Info
All SCOP Domains
1a: SCOP_d1h6ka1 (A:27-290)
1b: SCOP_d1h6ka2 (A:291-480)
1c: SCOP_d1h6ka3 (A:481-790)
1d: SCOP_d1h6kb1 (B:26-290)
1e: SCOP_d1h6kb2 (B:291-480)
1f: SCOP_d1h6kb3 (B:481-790)
1g: SCOP_d1h6kc1 (C:26-290)
1h: SCOP_d1h6kc2 (C:291-480)
1i: SCOP_d1h6kc3 (C:481-790)
2a: SCOP_d1h6kx_ (X:)
2b: SCOP_d1h6ky_ (Y:)
2c: SCOP_d1h6kz_ (Z:)
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Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All alpha proteins
(14657)
Fold
:
alpha-alpha superhelix
(690)
Superfamily
:
ARM repeat
(317)
Family
:
MIF4G domain-like
(17)
Protein domain
:
CBP80, 80KDa nuclear cap-binding protein
(6)
Human (Homo sapiens) [TaxId: 9606]
(6)
1a
d1h6ka1
A:27-290
1b
d1h6ka2
A:291-480
1c
d1h6ka3
A:481-790
1d
d1h6kb1
B:26-290
1e
d1h6kb2
B:291-480
1f
d1h6kb3
B:481-790
1g
d1h6kc1
C:26-290
1h
d1h6kc2
C:291-480
1i
d1h6kc3
C:481-790
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Ferredoxin-like
(1795)
Superfamily
:
RNA-binding domain, RBD
(289)
Family
:
Canonical RBD
(214)
Protein domain
:
CBP20, 20KDa nuclear cap-binding protein
(7)
Human (Homo sapiens) [TaxId: 9606]
(7)
2a
d1h6kx_
X:
2b
d1h6ky_
Y:
2c
d1h6kz_
Z:
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CATH Domains
(2, 12)
Info
all CATH domains
1a: CATH_1h6kZ00 (Z:38-118)
1b: CATH_1h6kX00 (X:38-118)
1c: CATH_1h6kY00 (Y:38-117)
2a: CATH_1h6kA01 (A:27-244)
2b: CATH_1h6kB01 (B:27-244)
2c: CATH_1h6kB03 (B:489-788)
2d: CATH_1h6kC03 (C:489-788)
2e: CATH_1h6kA03 (A:489-790)
2f: CATH_1h6kC01 (C:27-244)
2g: CATH_1h6kA02 (A:309-478)
2h: CATH_1h6kB02 (B:309-478)
2i: CATH_1h6kC02 (C:309-478)
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)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
2-Layer Sandwich
(8480)
Topology
:
Alpha-Beta Plaits
(1688)
Homologous Superfamily
:
[code=3.30.70.330, no name defined]
(307)
Human (Homo sapiens)
(81)
1a
1h6kZ00
Z:38-118
1b
1h6kX00
X:38-118
1c
1h6kY00
Y:38-117
Class
:
Mainly Alpha
(13335)
Architecture
:
Alpha Horseshoe
(399)
Topology
:
Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat
(320)
Homologous Superfamily
:
[code=1.25.40.180, no name defined]
(12)
Human (Homo sapiens)
(10)
2a
1h6kA01
A:27-244
2b
1h6kB01
B:27-244
2c
1h6kB03
B:489-788
2d
1h6kC03
C:489-788
2e
1h6kA03
A:489-790
2f
1h6kC01
C:27-244
2g
1h6kA02
A:309-478
2h
1h6kB02
B:309-478
2i
1h6kC02
C:309-478
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Pfam Domains
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Asymmetric Unit 1
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Asym.Unit (426 KB)
Header - Asym.Unit
Biol.Unit 1 (146 KB)
Header - Biol.Unit 1
Biol.Unit 2 (148 KB)
Header - Biol.Unit 2
Biol.Unit 3 (147 KB)
Header - Biol.Unit 3
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