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1H6I
Asym. Unit
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Asym.Unit (35 KB)
Biol.Unit 1 (32 KB)
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(1)
Title
:
A REFINED STRUCTURE OF HUMAN AQUAPORIN 1
Authors
:
B. L. De Groot, A. Engel, H. Grubmuller
Date
:
15 Jun 01 (Deposition) - 13 Dec 01 (Release) - 24 Feb 09 (Revision)
Method
:
ELECTRON CRYSTALLOGRAPHY
Resolution
:
3.54
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Membrane Protein, Water Channel, Two-Dimensional Crystal, Electron Diffraction, Electron Microscopy
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
B. L. De Groot, A. Engel, H. Grubmuller
A Refined Structure Of Human Aquaporin 1
Febs Lett. V. 504 206 2001
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
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Sites
(0, 0)
Info
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SAPs(SNPs)/Variants
(3, 3)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_013279 (P38L, chain A, )
2: VAR_004400 (A45V, chain A, )
3: VAR_022318 (G165D, chain A, )
View:
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dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_013279
P
38
L
AQP1_HUMAN
Polymorphism
---
A
P
38
L
2
UniProt
VAR_004400
A
45
V
AQP1_HUMAN
Polymorphism
28362692
A
A
45
V
3
UniProt
VAR_022318
G
165
D
AQP1_HUMAN
Polymorphism
28362731
A
G
165
D
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: MIP (A:74-82)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
MIP
PS00221
MIP family signature.
AQP1_HUMAN
74-82
1
A:74-82
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Exons
(4, 4)
Info
All Exons
Exon 1.18b (A:9-128)
Exon 1.21a (A:129-183)
Exon 1.22 (A:184-210)
Exon 1.23f (A:211-233)
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All Exon Boundaries
1: Boundary -/1.18b
2: Boundary 1.18b/1.21a
3: Boundary 1.21a/1.22
4: Boundary 1.22/1.23f
5: Boundary 1.23f/-
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.18b
ENST00000311813
18b
ENSE00001939785
chr7:
30951470-30951908
439
AQP1_HUMAN
1-128
128
1
A:9-128
120
1.21a
ENST00000311813
21a
ENSE00002194539
chr7:
30961681-30961845
165
AQP1_HUMAN
129-183
55
1
A:129-183
55
1.22
ENST00000311813
22
ENSE00002158270
chr7:
30962179-30962259
81
AQP1_HUMAN
184-210
27
1
A:184-210
27
1.23f
ENST00000311813
23f
ENSE00001372057
chr7:
30963065-30965131
2067
AQP1_HUMAN
211-269
59
1
A:211-233
23
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d1h6ia_ (A:)
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)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Membrane and cell surface proteins and peptides
(2046)
Fold
:
Aquaporin-like
(34)
Superfamily
:
Aquaporin-like
(34)
Family
:
Aquaporin-like
(22)
Protein domain
:
Aquaporin-1
(4)
Human (Homo sapiens) [TaxId: 9606]
(3)
1a
d1h6ia_
A:
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CATH Domains
(1, 1)
Info
all CATH domains
1a: CATH_1h6iA00 (A:9-233)
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Organisms
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)
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Class
:
Mainly Alpha
(13335)
Architecture
:
Up-down Bundle
(3216)
Topology
:
Glycerol uptake facilitator protein
(37)
Homologous Superfamily
:
Glycerol uptake facilitator protein.
(37)
Human (Homo sapiens)
(5)
1a
1h6iA00
A:9-233
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Pfam Domains
(0, 0)
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Chain A
Asymmetric Unit 1
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