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1H6H
Asym. Unit
Info
Asym.Unit (33 KB)
Biol.Unit 1 (29 KB)
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(1)
Title
:
STRUCTURE OF THE PX DOMAIN FROM P40PHOX BOUND TO PHOSPHATIDYLINOSITOL 3-PHOSPHATE
Authors
:
D. Karathanassis, J. Bravo, M. Pacold, O. Perisic, R. L. Williams
Date
:
15 Jun 01 (Deposition) - 01 Nov 01 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.70
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Px Domain
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
J. Bravo, D. Karathanassis, C. M. Pacold, M. E. Pacold, C. D. Ellson, K. E. Anderson, J. G. Butler, I. Lavenir, O. Perisic, P. T. Hawkins, L. Stephens, R. L. Williams
The Crystal Structure Of The Px Domain From P40Phox Bound To Phosphatidylinositol 3-Phosphate
Mol. Cell V. 8 829 2001
(for further references see the
PDB file header
)
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Hetero Components
(2, 2)
Info
All Hetero Components
1a: GLYCEROL (GOLa)
2a: 2-(BUTANOYLOXY)-1-{[(HYDROXY{[2,3,... (PIBa)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
GOL
1
Ligand/Ion
GLYCEROL
2
PIB
1
Ligand/Ion
2-(BUTANOYLOXY)-1-{[(HYDROXY{[2,3,4,6-TETRAHYDROXY-5-(PHOSPHONOOXY)CYCLOHEXYL]OXY}PHOSPHORYL)OXY]METHYL}ETHYL BUTANOATE
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Sites
(2, 2)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
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Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ILE A:26 , ALA A:27 , ARG A:58 , TYR A:59 , ARG A:60 , LYS A:92 , VAL A:93 , TYR A:94 , ARG A:105 , HOH A:2057 , HOH A:2170 , HOH A:2171 , HOH A:2172 , HOH A:2173 , HOH A:2174 , HOH A:2175 , HOH A:2176 , HOH A:2177 , HOH A:2178 , HOH A:2179 , HOH A:2180
BINDING SITE FOR RESIDUE PIB A 150
2
AC2
SOFTWARE
ILE A:29 , GLU A:30 , GLU A:31 , GLN A:99 , HOH A:2038 , HOH A:2041 , HOH A:2181
BINDING SITE FOR RESIDUE GOL A 151
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SAPs(SNPs)/Variants
(1, 1)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_065949 (R105Q, chain A, )
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dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_065949
R
105
Q
NCF4_HUMAN
Disease (CGD3)
---
A
R
105
Q
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: PX (A:19-140)
;
View:
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Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
PX
PS50195
PX domain profile.
NCF4_HUMAN
19-140
1
A:19-140
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Exons
(5, 5)
Info
All Exons
Exon 1.1 (A:2-11)
Exon 1.2 (A:11-39)
Exon 1.3 (A:40-91)
Exon 1.4 (A:91-114)
Exon 1.5 (A:115-144)
View:
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All Exon Boundaries
1: Boundary -/1.1
2: Boundary 1.1/1.2
3: Boundary 1.2/1.3
4: Boundary 1.3/1.4
5: Boundary 1.4/1.5
6: Boundary 1.5/1.6
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENST00000248899
1
ENSE00002158629
chr22:
37257030-37257245
216
NCF4_HUMAN
1-11
11
1
A:2-11
10
1.2
ENST00000248899
2
ENSE00001766180
chr22:
37260087-37260171
85
NCF4_HUMAN
11-39
29
1
A:11-39
29
1.3
ENST00000248899
3
ENSE00001678302
chr22:
37260961-37261114
154
NCF4_HUMAN
40-91
52
1
A:40-91
52
1.4
ENST00000248899
4
ENSE00001775431
chr22:
37263434-37263504
71
NCF4_HUMAN
91-114
24
1
A:91-114
24
1.5
ENST00000248899
5
ENSE00000880088
chr22:
37266457-37266584
128
NCF4_HUMAN
115-157
43
1
A:115-144
30
1.6
ENST00000248899
6
ENSE00000880089
chr22:
37267694-37267751
58
NCF4_HUMAN
157-176
20
0
-
-
1.8
ENST00000248899
8
ENSE00000653691
chr22:
37268369-37268467
99
NCF4_HUMAN
177-209
33
0
-
-
1.9a
ENST00000248899
9a
ENSE00001270603
chr22:
37271695-37271825
131
NCF4_HUMAN
210-253
44
0
-
-
1.9e
ENST00000248899
9e
ENSE00000653693
chr22:
37272071-37272136
66
NCF4_HUMAN
253-275
23
0
-
-
1.10b
ENST00000248899
10b
ENSE00001850230
chr22:
37273670-37274057
388
NCF4_HUMAN
275-339
65
0
-
-
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d1h6ha_ (A:)
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(
)
(
)
Folds
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)
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)
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)
(
)
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)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
PX domain
(23)
Superfamily
:
PX domain
(23)
Family
:
PX domain
(9)
Protein domain
:
p40phox NADPH oxidase
(1)
Human (Homo sapiens) [TaxId: 9606]
(1)
1a
d1h6ha_
A:
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CATH Domains
(1, 1)
Info
all CATH domains
1a: CATH_1h6hA00 (A:2-144)
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)
Organisms
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)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
2-Layer Sandwich
(8480)
Topology
:
PX Domain
(10)
Homologous Superfamily
:
PX Domain
(10)
Human (Homo sapiens)
(5)
1a
1h6hA00
A:2-144
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Pfam Domains
(0, 0)
Info
all PFAM domains
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Chain A
Asymmetric Unit 1
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Asym.Unit (33 KB)
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