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1H5Q
Biol. Unit 3
Info
Asym.Unit (1.0 MB)
Biol.Unit 1 (359 KB)
Biol.Unit 2 (363 KB)
Biol.Unit 3 (361 KB)
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(1)
Title
:
MANNITOL DEHYDROGENASE FROM AGARICUS BISPORUS
Authors
:
S. Horer, J. Stoop, H. Mooibroek, U. Baumann, J. Sassoon
Date
:
24 May 01 (Deposition) - 21 Jun 01 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.50
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H,I,J,K,L
Biol. Unit 1: A,B,C,D (1x)
Biol. Unit 2: E,F,G,H (1x)
Biol. Unit 3: I,J,K,L (1x)
Keywords
:
Oxidoreductase, Mannitol Metabolism
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
S. Horer, J. Stoop, H. Mooibroek, U. Baumann, J. Sassoon
The Crystallographic Structure Of The Mannitol 2- Dehydrogenase Nadp+ Binary Complex From Agaricus Bisporus
J. Biol. Chem. V. 276 27555 2001
(for further references see the
PDB file header
)
[
close entry info
]
Hetero Components
(1, 4)
Info
All Hetero Components
1a: NADP NICOTINAMIDE-ADENINE-DINUCLEO... (NAPa)
1b: NADP NICOTINAMIDE-ADENINE-DINUCLEO... (NAPb)
1c: NADP NICOTINAMIDE-ADENINE-DINUCLEO... (NAPc)
1d: NADP NICOTINAMIDE-ADENINE-DINUCLEO... (NAPd)
1e: NADP NICOTINAMIDE-ADENINE-DINUCLEO... (NAPe)
1f: NADP NICOTINAMIDE-ADENINE-DINUCLEO... (NAPf)
1g: NADP NICOTINAMIDE-ADENINE-DINUCLEO... (NAPg)
1h: NADP NICOTINAMIDE-ADENINE-DINUCLEO... (NAPh)
1i: NADP NICOTINAMIDE-ADENINE-DINUCLEO... (NAPi)
1j: NADP NICOTINAMIDE-ADENINE-DINUCLEO... (NAPj)
1k: NADP NICOTINAMIDE-ADENINE-DINUCLEO... (NAPk)
1l: NADP NICOTINAMIDE-ADENINE-DINUCLEO... (NAPl)
2a: NICKEL (II) ION (NIa)
2b: NICKEL (II) ION (NIb)
2c: NICKEL (II) ION (NIc)
2d: NICKEL (II) ION (NId)
2e: NICKEL (II) ION (NIe)
2f: NICKEL (II) ION (NIf)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
NAP
4
Ligand/Ion
NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDEPHOSPHATE
2
NI
-1
Ligand/Ion
NICKEL (II) ION
[
close Hetero Component info
]
Sites
(6, 6)
Info
All Sites
1: AC5 (SOFTWARE)
2: AC6 (SOFTWARE)
3: BC6 (SOFTWARE)
4: BC7 (SOFTWARE)
5: BC8 (SOFTWARE)
6: BC9 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
1
AC5
SOFTWARE
TRP I:262 , HOH I:2299 , HOH I:2300 , TRP K:262 , HOH K:2273 , HOH K:2275
BINDING SITE FOR RESIDUE NI I3263
2
AC6
SOFTWARE
TRP J:262 , HOH J:2257 , HOH J:2260 , TRP L:262 , HOH L:2295 , HOH L:2297
BINDING SITE FOR RESIDUE NI J3263
3
BC6
SOFTWARE
ASN I:20 , ARG I:21 , GLY I:22 , ILE I:23 , TYR I:42 , ARG I:43 , SER I:44 , ALA I:45 , CYS I:68 , ASP I:69 , VAL I:70 , ASN I:96 , ALA I:97 , GLY I:98 , VAL I:119 , THR I:147 , SER I:148 , SER I:149 , TYR I:169 , LYS I:173 , PRO I:199 , GLY I:200 , VAL I:202 , GLN I:206 , HOH I:2062 , HOH I:2063 , HOH I:2241 , HOH I:2302 , HOH I:2303 , HOH I:2304 , HOH I:2305 , HOH I:2306 , HOH I:2307 , HOH I:2308
BINDING SITE FOR RESIDUE NAP I 263
4
BC7
SOFTWARE
GLY J:18 , ASN J:20 , ARG J:21 , GLY J:22 , ILE J:23 , TYR J:42 , ARG J:43 , SER J:44 , ALA J:45 , CYS J:68 , ASP J:69 , VAL J:70 , ASN J:96 , ALA J:97 , GLY J:98 , VAL J:119 , THR J:147 , SER J:148 , SER J:149 , TYR J:169 , LYS J:173 , PRO J:199 , GLY J:200 , VAL J:202 , GLN J:206 , HOH J:2023 , HOH J:2044 , HOH J:2163 , HOH J:2205 , HOH J:2261 , HOH J:2262 , HOH J:2263 , HOH J:2264 , HOH J:2265 , HOH J:2266 , HOH J:2267 , HOH J:2268
BINDING SITE FOR RESIDUE NAP J 263
5
BC8
SOFTWARE
GLY K:18 , ASN K:20 , ARG K:21 , GLY K:22 , ILE K:23 , TYR K:42 , ARG K:43 , SER K:44 , ALA K:45 , CYS K:68 , ASP K:69 , VAL K:70 , ASN K:96 , ALA K:97 , GLY K:98 , VAL K:119 , THR K:147 , SER K:148 , SER K:149 , TYR K:169 , LYS K:173 , PRO K:199 , GLY K:200 , VAL K:202 , THR K:204 , GLN K:206 , HOH K:2046 , HOH K:2049 , HOH K:2136 , HOH K:2221 , HOH K:2276 , HOH K:2277 , HOH K:2278 , HOH K:2279 , HOH K:2281 , HOH K:2282 , HOH K:2283 , HOH K:2284
BINDING SITE FOR RESIDUE NAP K 263
6
BC9
SOFTWARE
ASN L:20 , ARG L:21 , GLY L:22 , ILE L:23 , TYR L:42 , ARG L:43 , SER L:44 , ALA L:45 , CYS L:68 , ASP L:69 , VAL L:70 , ASN L:96 , ALA L:97 , GLY L:98 , VAL L:99 , THR L:147 , SER L:148 , SER L:149 , TYR L:169 , LYS L:173 , PRO L:199 , GLY L:200 , VAL L:202 , GLN L:206 , HOH L:2060 , HOH L:2061 , HOH L:2235 , HOH L:2239 , HOH L:2299 , HOH L:2300 , HOH L:2301 , HOH L:2302 , HOH L:2303 , HOH L:2304 , HOH L:2305 , HOH L:2306
BINDING SITE FOR RESIDUE NAP L 263
[
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]
SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
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PROSITE Patterns/Profiles
(, 0)
Info
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;
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End label:
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[
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Exons
(0, 0)
Info
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(1, 12)
Info
All SCOP Domains
1a: SCOP_d1h5qa_ (A:)
1b: SCOP_d1h5qb_ (B:)
1c: SCOP_d1h5qk_ (K:)
1d: SCOP_d1h5ql_ (L:)
1e: SCOP_d1h5qc_ (C:)
1f: SCOP_d1h5qd_ (D:)
1g: SCOP_d1h5qe_ (E:)
1h: SCOP_d1h5qf_ (F:)
1i: SCOP_d1h5qg_ (G:)
1j: SCOP_d1h5qh_ (H:)
1k: SCOP_d1h5qi_ (I:)
1l: SCOP_d1h5qj_ (J:)
View:
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)
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)
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(
)
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)
(
)
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)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
NAD(P)-binding Rossmann-fold domains
(1604)
Superfamily
:
NAD(P)-binding Rossmann-fold domains
(1604)
Family
:
Tyrosine-dependent oxidoreductases
(503)
Protein domain
:
Mannitol dehydrogenase
(1)
Mushroom (Agaricus bisporus) [TaxId: 5341]
(1)
1a
d1h5qa_
A:
1b
d1h5qb_
B:
1c
d1h5qk_
K:
1d
d1h5ql_
L:
1e
d1h5qc_
C:
1f
d1h5qd_
D:
1g
d1h5qe_
E:
1h
d1h5qf_
F:
1i
d1h5qg_
G:
1j
d1h5qh_
H:
1k
d1h5qi_
I:
1l
d1h5qj_
J:
[
close SCOP info
]
CATH Domains
(1, 12)
Info
all CATH domains
1a: CATH_1h5qA00 (A:3-262)
1b: CATH_1h5qB00 (B:3-262)
1c: CATH_1h5qK00 (K:3-262)
1d: CATH_1h5qL00 (L:3-262)
1e: CATH_1h5qC00 (C:3-262)
1f: CATH_1h5qD00 (D:3-262)
1g: CATH_1h5qE00 (E:3-262)
1h: CATH_1h5qF00 (F:3-262)
1i: CATH_1h5qG00 (G:3-262)
1j: CATH_1h5qH00 (H:3-262)
1k: CATH_1h5qI00 (I:3-262)
1l: CATH_1h5qJ00 (J:3-262)
View:
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)
(
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)
(
)
Topologies
(
)
(
)
Homologous Superfamilies
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Rossmann fold
(7312)
Homologous Superfamily
:
NAD(P)-binding Rossmann-like Domain
(1244)
Common mushroom (Agaricus bisporus)
(1)
1a
1h5qA00
A:3-262
1b
1h5qB00
B:3-262
1c
1h5qK00
K:3-262
1d
1h5qL00
L:3-262
1e
1h5qC00
C:3-262
1f
1h5qD00
D:3-262
1g
1h5qE00
E:3-262
1h
1h5qF00
F:3-262
1i
1h5qG00
G:3-262
1j
1h5qH00
H:3-262
1k
1h5qI00
I:3-262
1l
1h5qJ00
J:3-262
[
close CATH info
]
Pfam Domains
(0, 0)
Info
all PFAM domains
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Sorry, no Info available
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Atom Selection
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Protein & NOT Site
Protein & NOT PROSITE
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Chain L
Asymmetric Unit 1
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Asym.Unit (1.0 MB)
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