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1H3A
Asym. Unit
Info
Asym.Unit (290 KB)
Biol.Unit 1 (191 KB)
Biol.Unit 2 (193 KB)
Biol.Unit 3 (192 KB)
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(1)
Title
:
STRUCTURES OF HUMAN OXIDOSQUALENE CYCLASE INHIBITORS BOUND TO A HOMOLGOUS ENZYME
Authors
:
A. Lenhart, D. J. Reinert, W. A. Weihofen, J. D. Aebi, H. Dehmlow, O. H. Morand, G. E. Schulz
Date
:
24 Aug 02 (Deposition) - 21 Aug 03 (Release) - 20 Nov 13 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.85
Chains
:
Asym. Unit : A,B,C
Biol. Unit 1: A,B (1x)
Biol. Unit 2: A,B (1x)
Biol. Unit 3: C (2x)
Keywords
:
Isomerase, Cholesterol Biosynthesis, Inhibitor, Monotopic Membrane Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
A. Lenhart, D. J. Reinert, J. D. Aebi, H. Dehmlow, O. H. Morand, G. E. Schulz
Binding Structures And Potencies Of Oxidosqualene Cyclase Inhibitors With The Homologous Squalene-Hopene Cyclase
J. Med. Chem. V. 46 2083 2003
(for further references see the
PDB file header
)
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Hetero Components
(2, 6)
Info
All Hetero Components
1a: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTA... (C8Ea)
1b: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTA... (C8Eb)
1c: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTA... (C8Ec)
2a: (2E)-N-ALLYL-4-{[3-(4-BROMOPHENYL)... (R04a)
2b: (2E)-N-ALLYL-4-{[3-(4-BROMOPHENYL)... (R04b)
2c: (2E)-N-ALLYL-4-{[3-(4-BROMOPHENYL)... (R04c)
View:
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No.
Name
Count
Type
Full Name
1
C8E
3
Ligand/Ion
(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE
2
R04
3
Ligand/Ion
(2E)-N-ALLYL-4-{[3-(4-BROMOPHENYL)-5-FLUORO-1-METHYL-1H-INDAZOL-6-YL]OXY}-N-METHYL-2-BUTEN-1-AMINE
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Sites
(6, 6)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
GLU A:250 , ARG A:251 , PRO A:348 , GLY A:349 , TYR A:371 , ARG B:183 , ARG B:238 , ILE B:242 , LEU B:275 , MET B:277
BINDING SITE FOR RESIDUE C8E A 700
2
AC2
SOFTWARE
LEU A:36 , TRP A:169 , ILE A:261 , PRO A:263 , SER A:307 , TRP A:312 , PHE A:365 , ASP A:374 , ASP A:376 , TRP A:489 , PHE A:601 , PHE A:605 , LEU A:607
BINDING SITE FOR RESIDUE R04 A 800
3
AC3
SOFTWARE
ARG A:183 , ARG A:238 , ILE A:242 , GLU B:250 , ARG B:251 , PRO B:348 , GLY B:349 , TYR B:371 , HOH B:2092
BINDING SITE FOR RESIDUE C8E B 700
4
AC4
SOFTWARE
LEU B:36 , TRP B:169 , ILE B:261 , PRO B:263 , SER B:307 , TRP B:312 , PHE B:365 , ASP B:374 , ASP B:376 , TRP B:489 , PHE B:601 , PHE B:605 , LEU B:607
BINDING SITE FOR RESIDUE R04 B 800
5
AC5
SOFTWARE
ARG C:238 , GLU C:241 , ILE C:242 , GLU C:250 , ARG C:251 , LEU C:275 , MET C:277 , PRO C:348 , GLY C:349 , TYR C:371
BINDING SITE FOR RESIDUE C8E C 700
6
AC6
SOFTWARE
LEU C:36 , TRP C:169 , ILE C:261 , PRO C:263 , SER C:307 , TRP C:312 , PHE C:365 , ASP C:374 , ASP C:376 , TRP C:489 , PHE C:601 , LEU C:607
BINDING SITE FOR RESIDUE R04 C 800
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(1, 3)
Info
All PROSITE Patterns/Profiles
1: TERPENE_SYNTHASES (A:482-496,B:482-496,C:482-496)
;
View:
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
TERPENE_SYNTHASES
PS01074
Terpene synthases signature.
SQHC_ALIAD
482-496
3
A:482-496
B:482-496
C:482-496
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Exons
(0, 0)
Info
All Exons
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 6)
Info
All SCOP Domains
1a: SCOP_d1h3aa1 (A:10-36,A:308-629)
1b: SCOP_d1h3aa2 (A:37-307)
1c: SCOP_d1h3ab1 (B:10-36,B:308-629)
1d: SCOP_d1h3ab2 (B:37-307)
1e: SCOP_d1h3ac1 (C:10-36,C:308-629)
1f: SCOP_d1h3ac2 (C:37-307)
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Organisms
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)
(
)
Class
:
All alpha proteins
(14657)
Fold
:
alpha/alpha toroid
(324)
Superfamily
:
Terpenoid cyclases/Protein prenyltransferases
(151)
Family
:
Terpene synthases
(18)
Protein domain
:
Squalene-hopene cyclase
(16)
Alicyclobacillus acidocaldarius [TaxId: 405212]
(16)
1a
d1h3aa1
A:10-36,A:308-629
1b
d1h3aa2
A:37-307
1c
d1h3ab1
B:10-36,B:308-629
1d
d1h3ab2
B:37-307
1e
d1h3ac1
C:10-36,C:308-629
1f
d1h3ac2
C:37-307
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CATH Domains
(1, 6)
Info
all CATH domains
1a: CATH_1h3aA01 (A:10-35,A:308-628)
1b: CATH_1h3aB01 (B:10-35,B:308-628)
1c: CATH_1h3aC01 (C:10-35,C:308-628)
1d: CATH_1h3aA02 (A:36-307)
1e: CATH_1h3aB02 (B:36-307)
1f: CATH_1h3aC02 (C:36-307)
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Organisms
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(
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Class
:
Mainly Alpha
(13335)
Architecture
:
Alpha/alpha barrel
(251)
Topology
:
Glycosyltransferase
(233)
Homologous Superfamily
:
[code=1.50.10.20, no name defined]
(105)
Alicyclobacillus acidocaldarius. Organism_taxid: 405212. Strain: k12.Cell_line: jm105.
(11)
1a
1h3aA01
A:10-35,A:308-628
1b
1h3aB01
B:10-35,B:308-628
1c
1h3aC01
C:10-35,C:308-628
1d
1h3aA02
A:36-307
1e
1h3aB02
B:36-307
1f
1h3aC02
C:36-307
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Pfam Domains
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Asymmetric Unit 1
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select all 'ALA' residues (Alanines) in chain 'A'
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select residue range 5 to 10 in all chains
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Show PDB file:
Asym.Unit (290 KB)
Header - Asym.Unit
Biol.Unit 1 (191 KB)
Header - Biol.Unit 1
Biol.Unit 2 (193 KB)
Header - Biol.Unit 2
Biol.Unit 3 (192 KB)
Header - Biol.Unit 3
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