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1GZ0
Biol. Unit 2
Info
Asym.Unit (288 KB)
Biol.Unit 1 (82 KB)
Biol.Unit 2 (68 KB)
Biol.Unit 3 (82 KB)
Biol.Unit 4 (69 KB)
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(1)
Title
:
23S RIBOSOMAL RNA G2251 2'O-METHYLTRANSFERASE RLMB
Authors
:
G. Michel, M. Cygler
Date
:
03 May 02 (Deposition) - 17 Oct 02 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.50
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H
Biol. Unit 1: A,F (1x)
Biol. Unit 2: B,G (1x)
Biol. Unit 3: C,H (1x)
Biol. Unit 4: D,E (1x)
Keywords
:
Transferase, Methyltransferase, 2'O-Methyltransferase, Knot, Montreal- Kingston Bacterial Structural Genomics Initiative, Bsgi, Structural Genomics
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
G. Michel, V. Sauve, R. Larocque, Y. Li, A. Matte, M. Cygler
The Structure Of The Rlmb 23S Rrna Methyltransferase Reveals A New Methyltransferase Fold With A Unique Knot
Structure V. 10 1303 2002
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Hetero Components
(1, 14)
Info
All Hetero Components
1a: SELENOMETHIONINE (MSEa)
1aa: SELENOMETHIONINE (MSEaa)
1ab: SELENOMETHIONINE (MSEab)
1ac: SELENOMETHIONINE (MSEac)
1ad: SELENOMETHIONINE (MSEad)
1ae: SELENOMETHIONINE (MSEae)
1af: SELENOMETHIONINE (MSEaf)
1ag: SELENOMETHIONINE (MSEag)
1ah: SELENOMETHIONINE (MSEah)
1ai: SELENOMETHIONINE (MSEai)
1aj: SELENOMETHIONINE (MSEaj)
1ak: SELENOMETHIONINE (MSEak)
1al: SELENOMETHIONINE (MSEal)
1am: SELENOMETHIONINE (MSEam)
1an: SELENOMETHIONINE (MSEan)
1ao: SELENOMETHIONINE (MSEao)
1ap: SELENOMETHIONINE (MSEap)
1aq: SELENOMETHIONINE (MSEaq)
1ar: SELENOMETHIONINE (MSEar)
1as: SELENOMETHIONINE (MSEas)
1at: SELENOMETHIONINE (MSEat)
1au: SELENOMETHIONINE (MSEau)
1av: SELENOMETHIONINE (MSEav)
1aw: SELENOMETHIONINE (MSEaw)
1ax: SELENOMETHIONINE (MSEax)
1ay: SELENOMETHIONINE (MSEay)
1az: SELENOMETHIONINE (MSEaz)
1b: SELENOMETHIONINE (MSEb)
1ba: SELENOMETHIONINE (MSEba)
1bb: SELENOMETHIONINE (MSEbb)
1bc: SELENOMETHIONINE (MSEbc)
1bd: SELENOMETHIONINE (MSEbd)
1be: SELENOMETHIONINE (MSEbe)
1bf: SELENOMETHIONINE (MSEbf)
1c: SELENOMETHIONINE (MSEc)
1d: SELENOMETHIONINE (MSEd)
1e: SELENOMETHIONINE (MSEe)
1f: SELENOMETHIONINE (MSEf)
1g: SELENOMETHIONINE (MSEg)
1h: SELENOMETHIONINE (MSEh)
1i: SELENOMETHIONINE (MSEi)
1j: SELENOMETHIONINE (MSEj)
1k: SELENOMETHIONINE (MSEk)
1l: SELENOMETHIONINE (MSEl)
1m: SELENOMETHIONINE (MSEm)
1n: SELENOMETHIONINE (MSEn)
1o: SELENOMETHIONINE (MSEo)
1p: SELENOMETHIONINE (MSEp)
1q: SELENOMETHIONINE (MSEq)
1r: SELENOMETHIONINE (MSEr)
1s: SELENOMETHIONINE (MSEs)
1t: SELENOMETHIONINE (MSEt)
1u: SELENOMETHIONINE (MSEu)
1v: SELENOMETHIONINE (MSEv)
1w: SELENOMETHIONINE (MSEw)
1x: SELENOMETHIONINE (MSEx)
1y: SELENOMETHIONINE (MSEy)
1z: SELENOMETHIONINE (MSEz)
View:
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Label:
No.
Name
Count
Type
Full Name
1
MSE
14
Mod. Amino Acid
SELENOMETHIONINE
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Sites
(0, 0)
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SAPs(SNPs)/Variants
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PROSITE Patterns/Profiles
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Exons
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(2, 14)
Info
All SCOP Domains
1a: SCOP_d1gz0a2 (A:2-77)
1b: SCOP_d1gz0b2 (B:-1-77)
1c: SCOP_d1gz0c2 (C:2-77)
1d: SCOP_d1gz0d2 (D:-1-77)
1e: SCOP_d1gz0f2 (F:-10-77)
1f: SCOP_d1gz0h2 (H:-7-77)
2a: SCOP_d1gz0a1 (A:78-243)
2b: SCOP_d1gz0b1 (B:78-243)
2c: SCOP_d1gz0c1 (C:78-243)
2d: SCOP_d1gz0d1 (D:78-243)
2e: SCOP_d1gz0e1 (E:78-243)
2f: SCOP_d1gz0f1 (F:78-243)
2g: SCOP_d1gz0g1 (G:78-243)
2h: SCOP_d1gz0h1 (H:78-243)
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(
)
(
)
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(
)
(
)
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(
)
(
)
Families
(
)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Bacillus chorismate mutase-like
(324)
Superfamily
:
L30e-like
(93)
Family
:
RNA 2'-O ribose methyltransferase substrate binding domain
(2)
Protein domain
:
RlmB, N-terminal domain
(1)
Escherichia coli [TaxId: 562]
(1)
1a
d1gz0a2
A:2-77
1b
d1gz0b2
B:-1-77
1c
d1gz0c2
C:2-77
1d
d1gz0d2
D:-1-77
1e
d1gz0f2
F:-10-77
1f
d1gz0h2
H:-7-77
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
alpha/beta knot
(57)
Superfamily
:
alpha/beta knot
(57)
Family
:
SpoU-like RNA 2'-O ribose methyltransferase
(8)
Protein domain
:
RlmB, C-terminal domain
(1)
Escherichia coli [TaxId: 562]
(1)
2a
d1gz0a1
A:78-243
2b
d1gz0b1
B:78-243
2c
d1gz0c1
C:78-243
2d
d1gz0d1
D:78-243
2e
d1gz0e1
E:78-243
2f
d1gz0f1
F:78-243
2g
d1gz0g1
G:78-243
2h
d1gz0h1
H:78-243
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CATH Domains
(2, 14)
Info
all CATH domains
1a: CATH_1gz0F01 (F:-10-76)
1b: CATH_1gz0H01 (H:-7-76)
1c: CATH_1gz0A01 (A:2-78)
1d: CATH_1gz0C01 (C:2-78)
1e: CATH_1gz0D01 (D:-1-77)
1f: CATH_1gz0B01 (B:-1-76)
2a: CATH_1gz0B02 (B:77-243)
2b: CATH_1gz0F02 (F:77-243)
2c: CATH_1gz0H02 (H:77-243)
2d: CATH_1gz0D02 (D:78-243)
2e: CATH_1gz0E00 (E:78-243)
2f: CATH_1gz0G00 (G:78-243)
2g: CATH_1gz0A02 (A:79-243)
2h: CATH_1gz0C02 (C:79-243)
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)
(
)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
2-Layer Sandwich
(8480)
Topology
:
60s Ribosomal Protein L30; Chain: A;
(235)
Homologous Superfamily
:
[code=3.30.1330.30, no name defined]
(102)
Escherichia coli. Organism_taxid: 562. Strain: mc1061 p3.
(1)
1a
1gz0F01
F:-10-76
1b
1gz0H01
H:-7-76
1c
1gz0A01
A:2-78
1d
1gz0C01
C:2-78
1e
1gz0D01
D:-1-77
1f
1gz0B01
B:-1-76
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Alpha/beta knot
(33)
Homologous Superfamily
:
[code=3.40.1280.10, no name defined]
(33)
Escherichia coli. Organism_taxid: 562. Strain: mc1061 p3.
(1)
2a
1gz0B02
B:77-243
2b
1gz0F02
F:77-243
2c
1gz0H02
H:77-243
2d
1gz0D02
D:78-243
2e
1gz0E00
E:78-243
2f
1gz0G00
G:78-243
2g
1gz0A02
A:79-243
2h
1gz0C02
C:79-243
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Pfam Domains
(0, 0)
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Asymmetric Unit 1
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Asym.Unit (288 KB)
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