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1GYE
Asym. Unit
Info
Asym.Unit (61 KB)
Biol.Unit 1 (55 KB)
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(1)
Title
:
STRUCTURE OF CELLVIBRIO CELLULOSA ALPHA-L-ARABINANASE COMPLEXED WITH ARABINOHEXAOSE
Authors
:
D. Nurizzo, J. P. Turkenburg, S. J. Charnock, S. M. Roberts, E. J. Dodson V. A. Mckie, E. J. Taylor, H. J. Gilbert, G. J. Davies
Date
:
23 Apr 02 (Deposition) - 23 Aug 02 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.50
Chains
:
Asym. Unit : B
Biol. Unit 1: B (1x)
Keywords
:
Arabinanase, Hydrolase, Propeller, Catalysis, Cellvibrio, Pseudomonas
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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)
Reference
:
D. Nurizzo, J. P. Turkenburg, S. J. Charnock, S. M. Roberts, E. J. Dodson, V. A. Mckie, E. J. Taylor, H. J. Gilbert, G. J. Davies
Cellovibrio Cellulosa Alpha-L-Arabinanase 43A Has A Novel Five-Blade Beta-Propeller Fold
Nat. Struct. Biol. V. 9 665 2002
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Hetero Components
(2, 7)
Info
All Hetero Components
1a: ALPHA-L-ARABINOFURANOSE (AHRa)
1b: ALPHA-L-ARABINOFURANOSE (AHRb)
1c: ALPHA-L-ARABINOFURANOSE (AHRc)
1d: ALPHA-L-ARABINOFURANOSE (AHRd)
1e: ALPHA-L-ARABINOFURANOSE (AHRe)
1f: ALPHA-L-ARABINOFURANOSE (AHRf)
2a: CHLORIDE ION (CLa)
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No.
Name
Count
Type
Full Name
1
AHR
6
Ligand/Ion
ALPHA-L-ARABINOFURANOSE
2
CL
1
Ligand/Ion
CHLORIDE ION
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Sites
(7, 7)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
7: AC7 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
PHE B:114 , GLY B:115 , LYS B:116 , AHR B:802
BINDING SITE FOR RESIDUE AHR B 801
2
AC2
SOFTWARE
GLY B:115 , AHR B:801 , AHR B:803
BINDING SITE FOR RESIDUE AHR B 802
3
AC3
SOFTWARE
ALA B:113 , PHE B:114 , GLY B:115 , ASN B:155 , SER B:175 , PHE B:176 , AHR B:802 , AHR B:804 , HOH B:2076
BINDING SITE FOR RESIDUE AHR B 803
4
AC4
SOFTWARE
ASP B:38 , TRP B:94 , GLU B:221 , CYS B:241 , AHR B:803 , AHR B:805
BINDING SITE FOR RESIDUE AHR B 804
5
AC5
SOFTWARE
TRP B:94 , AHR B:804 , AHR B:806
BINDING SITE FOR RESIDUE AHR B 805
6
AC6
SOFTWARE
ASP B:35 , VAL B:36 , THR B:53 , GLY B:54 , HIS B:92 , GLN B:316 , AHR B:805
BINDING SITE FOR RESIDUE AHR B 806
7
AC7
SOFTWARE
HIS B:291 , HOH B:2009 , HOH B:2024 , HOH B:2025 , HOH B:2049 , HOH B:2070 , HOH B:2071
BINDING SITE FOR RESIDUE CL B 901
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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PROSITE Patterns/Profiles
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Exons
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d1gyeb_ (B:)
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)
Protein Domains
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)
(
)
Organisms
(
)
(
)
Class
:
All beta proteins
(24004)
Fold
:
5-bladed beta-propeller
(42)
Superfamily
:
Arabinanase/levansucrase/invertase
(37)
Family
:
alpha-L-arabinanase-like
(18)
Protein domain
:
alpha-L-arabinanase
(3)
Cellvibrio cellulosa [TaxId: 155077]
(3)
1a
d1gyeb_
B:
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CATH Domains
(1, 1)
Info
all CATH domains
1a: CATH_1gyeB00 (B:32-346)
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Organisms
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)
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)
Class
:
Mainly Beta
(13760)
Architecture
:
5 Propellor
(21)
Topology
:
Tachylectin-2; Chain A
(21)
Homologous Superfamily
:
Glycosyl hydrolase domain; family 43
(20)
Cellvibrio cellulosa. Organism_taxid: 155077.
(3)
1a
1gyeB00
B:32-346
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Pfam Domains
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Chain B
Asymmetric Unit 1
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Asym.Unit (61 KB)
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