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1GWW
Asym. Unit
Info
Asym.Unit (113 KB)
Biol.Unit 1 (56 KB)
Biol.Unit 2 (56 KB)
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(1)
Title
:
ALPHA-,1,3 GALACTOSYLTRANSFERASE - ALPHA-D-GLUCOSE COMPLEX
Authors
:
E. Boix, Y. Zhang, G. J. Swaminathan, K. Brew, K. R. Acharya
Date
:
26 Mar 02 (Deposition) - 20 Mar 03 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.80
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
Galactosyltransferase, Blood Group Sugars, Lactose, N- Acetyl Lactosamine, Transferase, Glycosyltransferase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
E. Boix, Y. Zhang, G. J. Swaminathan, K. Brew, K. R. Acharya
Structural Basis Of Ordered Binding Of Donor And Acceptor Substrates To The Retaining Glycosyltransferase, Alpha -1, 3 Galactosyltransferase
J. Biol. Chem. V. 277 28310 2002
(for further references see the
PDB file header
)
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Hetero Components
(3, 5)
Info
All Hetero Components
1a: ALPHA-D-GLUCOSE (GLCa)
2a: MANGANESE (II) ION (MNa)
2b: MANGANESE (II) ION (MNb)
3a: URIDINE-5'-DIPHOSPHATE (UDPa)
3b: URIDINE-5'-DIPHOSPHATE (UDPb)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
GLC
1
Ligand/Ion
ALPHA-D-GLUCOSE
2
MN
2
Ligand/Ion
MANGANESE (II) ION
3
UDP
2
Ligand/Ion
URIDINE-5'-DIPHOSPHATE
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Sites
(5, 5)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
TRP B:195 , SER B:199 , ARG B:202 , ALA B:281 , TRP B:314 , HIS B:315 , ASP B:316 , GLU B:317 , ARG B:365 , UDP B:1369 , HOH B:2226 , HOH B:2230 , HOH B:2231
BINDING SITE FOR RESIDUE GLC B1371
2
AC2
SOFTWARE
ASP A:225 , ASP A:227 , UDP A:1369 , HOH A:2214
BINDING SITE FOR RESIDUE MN A1370
3
AC3
SOFTWARE
ASP B:225 , ASP B:227 , UDP B:1369 , HOH B:2229
BINDING SITE FOR RESIDUE MN B1370
4
AC4
SOFTWARE
PHE A:134 , ALA A:135 , VAL A:136 , TYR A:139 , TRP A:195 , ILE A:198 , SER A:199 , ARG A:202 , ASP A:225 , VAL A:226 , ASP A:227 , LYS A:359 , TYR A:361 , ARG A:365 , MN A:1370 , HOH A:2107 , HOH A:2109 , HOH A:2210 , HOH A:2211 , HOH A:2212 , HOH A:2214
BINDING SITE FOR RESIDUE UDP A1369
5
AC5
SOFTWARE
PHE B:134 , ALA B:135 , VAL B:136 , TYR B:139 , ILE B:198 , SER B:199 , ARG B:202 , ASP B:225 , VAL B:226 , ASP B:227 , LYS B:359 , TYR B:361 , ARG B:365 , MN B:1370 , GLC B:1371 , HOH B:2119 , HOH B:2120 , HOH B:2213 , HOH B:2226 , HOH B:2228 , HOH B:2229
BINDING SITE FOR RESIDUE UDP B1369
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(0, 0)
Info
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;
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Exons
(3, 6)
Info
All Exons
Exon 1.7 (A:82-92 | B:82-92)
Exon 1.8 (A:92-138 | B:92-138)
Exon 1.9 (A:138-368 | B:138-368)
View:
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All Exon Boundaries
1: Boundary 1.6/1.7
2: Boundary 1.7/1.8
3: Boundary 1.8/1.9
4: Boundary 1.9/-
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENSBTAT00000016033
1
ENSBTAE00000262074
chr11:
95459665-95459416
250
GGTA1_BOVIN
-
0
0
-
-
1.2
ENSBTAT00000016033
2
ENSBTAE00000262073
chr11:
95449479-95449385
95
GGTA1_BOVIN
-
0
0
-
-
1.3
ENSBTAT00000016033
3
ENSBTAE00000262072
chr11:
95415347-95415232
116
GGTA1_BOVIN
-
0
0
-
-
1.4
ENSBTAT00000016033
4
ENSBTAE00000262071
chr11:
95404542-95404454
89
GGTA1_BOVIN
1-27
27
0
-
-
1.5
ENSBTAT00000016033
5
ENSBTAE00000262069
chr11:
95397952-95397917
36
GGTA1_BOVIN
27-39
13
0
-
-
1.6
ENSBTAT00000016033
6
ENSBTAE00000262068
chr11:
95396284-95396219
66
GGTA1_BOVIN
39-61
23
0
-
-
1.7
ENSBTAT00000016033
7
ENSBTAE00000262067
chr11:
95395659-95395567
93
GGTA1_BOVIN
61-92
32
2
A:82-92
B:82-92
11
11
1.8
ENSBTAT00000016033
8
ENSBTAE00000004437
chr11:
95387778-95387641
138
GGTA1_BOVIN
92-138
47
2
A:92-138
B:92-138
47
47
1.9
ENSBTAT00000016033
9
ENSBTAE00000130543
chr11:
95383311-95382365
947
GGTA1_BOVIN
138-368
231
2
A:138-368
B:138-368
231
231
[
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SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d1gwwa_ (A:)
1b: SCOP_d1gwwb_ (B:)
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Protein Domains
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(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
Nucleotide-diphospho-sugar transferases
(408)
Superfamily
:
Nucleotide-diphospho-sugar transferases
(408)
Family
:
alpha-1,3-galactosyltransferase-like
(125)
Protein domain
:
alpha-1,3-galactosyltransferase catalytic domain
(22)
Cow (Bos taurus) [TaxId: 9913]
(22)
1a
d1gwwa_
A:
1b
d1gwwb_
B:
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CATH Domains
(1, 2)
Info
all CATH domains
1a: CATH_1gwwA00 (A:82-368)
1b: CATH_1gwwB00 (B:82-368)
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)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
Alpha-Beta Complex
(3881)
Topology
:
Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A
(231)
Homologous Superfamily
:
Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A
(231)
Bovine (Bos taurus)
(20)
1a
1gwwA00
A:82-368
1b
1gwwB00
B:82-368
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Pfam Domains
(0, 0)
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Asymmetric Unit 1
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select residue range 5 to 10 in chain 'A'
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Asym.Unit (113 KB)
Header - Asym.Unit
Biol.Unit 1 (56 KB)
Header - Biol.Unit 1
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