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1GWS
Asym. Unit
Info
Asym.Unit (111 KB)
Biol.Unit 1 (97 KB)
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(1)
Title
:
HEXADECAHEME HIGH MOLECULAR WEIGHT CYTOCHROME HMC FROM DESULFOVIBRIO VULGARIS HILDENBOROUGH
Authors
:
M. Czjzek, R. Haser, M. Bruschi
Date
:
25 Mar 02 (Deposition) - 13 Feb 03 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.42
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Electron Transport, Multiheme Cytochrome, Sulfate Reducing Bacteria, Periplasmic, Heme
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. Czjzek, L. Elantak, V. Zamboni, X. Morelli, A. Dolla, F. Guerlesquin, M. Bruschi
The Crystal Structure Of The Hexadaca-Heme Cytochrome Hmc And A Structural Model Of Its Complex With Cytochrome C3
Structure V. 10 1677 2002
[
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Hetero Components
(2, 16)
Info
All Hetero Components
1a: HEME C (HECa)
1b: HEME C (HECb)
1c: HEME C (HECc)
1d: HEME C (HECd)
1e: HEME C (HECe)
1f: HEME C (HECf)
1g: HEME C (HECg)
1h: HEME C (HECh)
1i: HEME C (HECi)
1j: HEME C (HECj)
1k: HEME C (HECk)
1l: HEME C (HECl)
2a: PROTOPORPHYRIN IX CONTAINING FE (HEMa)
2b: PROTOPORPHYRIN IX CONTAINING FE (HEMb)
2c: PROTOPORPHYRIN IX CONTAINING FE (HEMc)
2d: PROTOPORPHYRIN IX CONTAINING FE (HEMd)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
HEC
12
Ligand/Ion
HEME C
2
HEM
4
Ligand/Ion
PROTOPORPHYRIN IX CONTAINING FE
[
close Hetero Component info
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Sites
(16, 16)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
PHE A:33 , ARG A:34 , GLN A:37 , HIS A:38 , PHE A:64 , ASN A:82 , CYS A:83 , CYS A:86 , HIS A:87 , LEU A:90 , LYS A:96 , GLY A:98 , PRO A:99 , HOH A:2141
BINDING SITE FOR RESIDUE HEM A 602
02
AC2
SOFTWARE
GLY A:122 , PHE A:123 , HIS A:128 , HIS A:131 , ASN A:146 , CYS A:147 , CYS A:150 , HIS A:151 , GLU A:168 , SER A:170 , ARG A:172 , LEU A:234 , ARG A:236 , ASP A:276 , CYS A:277 , ARG A:278 , ILE A:285 , HEC A:606
BINDING SITE FOR RESIDUE HEM A 604
03
AC3
SOFTWARE
HIS A:35 , TRP A:118 , GLU A:120 , ILE A:121 , ARG A:172 , LEU A:186 , ALA A:190 , HIS A:191 , HIS A:198 , PRO A:210 , VAL A:211 , ASN A:212 , CYS A:213 , CYS A:216 , HIS A:217 , HEC A:601
BINDING SITE FOR RESIDUE HEM A 607
04
AC4
SOFTWARE
GLN A:238 , PHE A:265 , HIS A:267 , ALA A:274 , ASP A:276 , CYS A:277 , CYS A:280 , HIS A:281 , ILE A:285 , ASP A:286 , THR A:287 , CYS A:288 , HEC A:610 , HOH A:2146 , HOH A:2147
BINDING SITE FOR RESIDUE HEM A 608
05
AC5
SOFTWARE
PHE A:33 , HIS A:35 , CYS A:49 , CYS A:52 , HIS A:53 , LEU A:62 , LYS A:63 , PHE A:64 , ARG A:66 , TYR A:79 , HIS A:191 , HEM A:607 , HOH A:2140
BINDING SITE FOR RESIDUE HEC A 601
06
AC6
SOFTWARE
ILE A:17 , GLY A:18 , ALA A:19 , MET A:20 , LEU A:26 , ASP A:27 , LEU A:28 , TYR A:79 , HIS A:80 , GLN A:100 , ASP A:101 , CYS A:104 , CYS A:107 , HIS A:108
BINDING SITE FOR RESIDUE HEC A 603
07
AC7
SOFTWARE
LYS A:59 , HIS A:152 , TYR A:154 , SER A:170 , CYS A:171 , CYS A:174 , HIS A:175 , LYS A:182 , ALA A:193 , HOH A:2142
BINDING SITE FOR RESIDUE HEC A 605
08
AC8
SOFTWARE
PHE A:123 , ARG A:130 , HIS A:131 , CYS A:150 , CYS A:194 , CYS A:197 , HIS A:198 , GLU A:207 , THR A:208 , GLY A:209 , PRO A:210 , PHE A:225 , HEM A:604 , HOH A:2143 , HOH A:2144
BINDING SITE FOR RESIDUE HEC A 606
09
AC9
SOFTWARE
CYS A:280 , HIS A:282 , ARG A:284 , THR A:287 , CYS A:288 , CYS A:291 , HIS A:292 , ASP A:299 , SER A:300 , LYS A:301 , ALA A:308 , GLN A:311 , SER A:314 , ARG A:316
BINDING SITE FOR RESIDUE HEC A 609
10
BC1
SOFTWARE
PHE A:265 , ASP A:266 , HIS A:270 , LYS A:273 , MET A:315 , ARG A:316 , SER A:317 , CYS A:318 , CYS A:321 , HIS A:322 , ARG A:386 , LYS A:433 , LEU A:434 , THR A:437 , HEM A:608 , HEC A:612 , HOH A:2071
BINDING SITE FOR RESIDUE HEC A 610
11
BC2
SOFTWARE
CYS A:331 , CYS A:334 , HIS A:335 , PRO A:340 , THR A:341 , GLN A:346 , ASP A:432 , PHE A:438 , HIS A:439 , THR A:444 , LEU A:445 , GLN A:447 , HOH A:2149 , HOH A:2151
BINDING SITE FOR RESIDUE HEC A 611
12
BC3
SOFTWARE
GLU A:230 , ILE A:244 , LEU A:245 , PRO A:246 , THR A:259 , MET A:260 , LYS A:261 , PRO A:262 , VAL A:263 , LEU A:305 , GLU A:306 , MET A:309 , HIS A:310 , CYS A:347 , CYS A:350 , HIS A:351 , HEC A:610
BINDING SITE FOR RESIDUE HEC A 612
13
BC4
SOFTWARE
ILE A:398 , PHE A:416 , HIS A:418 , VAL A:422 , CYS A:446 , CYS A:449 , HIS A:450 , SER A:456 , LEU A:457 , PRO A:459 , LYS A:461 , CYS A:462 , TYR A:484 , HEC A:615 , HOH A:2131
BINDING SITE FOR RESIDUE HEC A 613
14
BC5
SOFTWARE
PHE A:337 , LYS A:339 , CYS A:449 , HIS A:451 , ASN A:452 , CYS A:462 , SER A:464 , CYS A:465 , HIS A:466 , ARG A:477 , PRO A:478 , ALA A:483 , GLN A:486 , GLN A:487
BINDING SITE FOR RESIDUE HEC A 614
15
BC6
SOFTWARE
ILE A:404 , SER A:414 , PHE A:416 , LYS A:420 , ILE A:421 , GLN A:487 , CYS A:488 , CYS A:491 , HIS A:492 , PRO A:500 , HEC A:613
BINDING SITE FOR RESIDUE HEC A 615
16
BC7
SOFTWARE
THR A:88 , GLN A:100 , ILE A:404 , GLY A:405 , SER A:406 , ILE A:407 , ALA A:408 , LYS A:409 , GLU A:410 , TYR A:411 , LYS A:481 , TYR A:484 , HIS A:485 , CYS A:488 , ASN A:502 , CYS A:505 , CYS A:508 , HIS A:509
BINDING SITE FOR RESIDUE HEC A 616
[
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]
SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
View:
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Sorry, no Info available
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: MULTIHEME_CYTC (A:44-512)
;
View:
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
MULTIHEME_CYTC
PS51008
Multiheme cytochrome c family profile.
HMWC_DESVH
75-545
1
A:44-512
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Exons
(0, 0)
Info
All Exons
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d1gwsa_ (A:)
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Protein Domains
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)
(
)
Organisms
(
)
(
)
Class
:
All alpha proteins
(14657)
Fold
:
Multiheme cytochromes
(149)
Superfamily
:
Multiheme cytochromes
(149)
Family
:
Cytochrome c3-like
(70)
Protein domain
:
16-heme cytochrome c HmcA
(3)
Desulfovibrio vulgaris [TaxId: 881]
(3)
1a
d1gwsa_
A:
[
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CATH Domains
(1, 4)
Info
all CATH domains
1a: CATH_1gwsA02 (A:118-226)
1b: CATH_1gwsA01 (A:10-110)
1c: CATH_1gwsA04 (A:315-349,A:389-512)
1d: CATH_1gwsA03 (A:240-314,A:350-388)
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Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
Alpha-Beta Complex
(3881)
Topology
:
Cytochrome C3
(62)
Homologous Superfamily
:
Cytochrome C3
(62)
Desulfovibrio vulgaris. Organism_taxid: 882. Strain: hildenborough
(3)
1a
1gwsA02
A:118-226
1b
1gwsA01
A:10-110
1c
1gwsA04
A:315-349,A:389-512
1d
1gwsA03
A:240-314,A:350-388
[
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Pfam Domains
(0, 0)
Info
all PFAM domains
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