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1GWC
Biol. Unit 2
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Asym.Unit (127 KB)
Biol.Unit 1 (42 KB)
Biol.Unit 2 (42 KB)
Biol.Unit 3 (42 KB)
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(1)
Title
:
THE STRUCTURE OF A TAU CLASS GLUTATHIONE S-TRANSFERASE FROM WHEAT, ACTIVE IN HERBICIDE DETOXIFICATION
Authors
:
R. Thom, I. Cummins, D. P. Dixon, R. Edwards, D. J. Cole, A. J. Lapthorn
Date
:
14 Mar 02 (Deposition) - 06 Jun 02 (Release) - 17 Aug 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.25
Chains
:
Asym. Unit : A,B,C
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Biol. Unit 3: C (1x)
Keywords
:
Transferase, Glutathione S-Transferase, Herbicide Detoxification, Plant, Tau Class
(Keyword Search:
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Reference
:
R. Thom, I. Cummins, D. P. Dixon, R. Edwards, D. J. Cole, A. J. Lapthorn
Structure Of A Tau Class Glutathione S-Transferase From Wheat Active In Herbicide Detoxification
Biochemistry V. 41 7008 2002
(for further references see the
PDB file header
)
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Hetero Components
(2, 2)
Info
All Hetero Components
1a: S-HEXYLGLUTATHIONE (GTXa)
1b: S-HEXYLGLUTATHIONE (GTXb)
1c: S-HEXYLGLUTATHIONE (GTXc)
2a: SULFATE ION (SO4a)
2b: SULFATE ION (SO4b)
2c: SULFATE ION (SO4c)
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No.
Name
Count
Type
Full Name
1
GTX
1
Ligand/Ion
S-HEXYLGLUTATHIONE
2
SO4
1
Ligand/Ion
SULFATE ION
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Sites
(2, 2)
Info
All Sites
1: AC2 (SOFTWARE)
2: AC5 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC2
SOFTWARE
LYS B:55 , ARG B:114 , GTX B:1225 , HOH B:2249 , HOH B:2250 , HOH B:2251
BINDING SITE FOR RESIDUE SO4 B1226
2
AC5
SOFTWARE
SER B:15 , PHE B:17 , LYS B:42 , LYS B:55 , ILE B:56 , PRO B:57 , GLU B:68 , SER B:69 , SO4 B:1226 , HOH B:2112 , HOH B:2245 , HOH B:2246 , HOH B:2247 , HOH B:2248 , HOH B:2249
BINDING SITE FOR RESIDUE GTX B1225
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SAPs(SNPs)/Variants
(0, 0)
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PROSITE Patterns/Profiles
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Exons
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(2, 6)
Info
All SCOP Domains
1a: SCOP_d1gwca1 (A:87-224)
1b: SCOP_d1gwcb1 (B:87-224)
1c: SCOP_d1gwcc1 (C:87-225)
2a: SCOP_d1gwca2 (A:4-86)
2b: SCOP_d1gwcb2 (B:4-86)
2c: SCOP_d1gwcc2 (C:4-86)
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Protein Domains
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Class
:
All alpha proteins
(14657)
Fold
:
GST C-terminal domain-like
(353)
Superfamily
:
GST C-terminal domain-like
(353)
Family
:
Glutathione S-transferase (GST), C-terminal domain
(263)
Protein domain
:
Class tau GST
(2)
Aegilops tauschii, also known as Triticum tauschii [TaxId: 37682]
(1)
1a
d1gwca1
A:87-224
1b
d1gwcb1
B:87-224
1c
d1gwcc1
C:87-225
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
Thioredoxin fold
(994)
Superfamily
:
Thioredoxin-like
(992)
Family
:
Glutathione S-transferase (GST), N-terminal domain
(216)
Protein domain
:
Class tau GST
(2)
Aegilops tauschii, also known as Triticum tauschii [TaxId: 37682]
(1)
2a
d1gwca2
A:4-86
2b
d1gwcb2
B:4-86
2c
d1gwcc2
C:4-86
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CATH Domains
(2, 6)
Info
all CATH domains
1a: CATH_1gwcA01 (A:4-83)
1b: CATH_1gwcB01 (B:4-83)
1c: CATH_1gwcC01 (C:4-83)
2a: CATH_1gwcA02 (A:84-224)
2b: CATH_1gwcB02 (B:84-224)
2c: CATH_1gwcC02 (C:84-224)
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Organisms
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Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Glutaredoxin
(620)
Homologous Superfamily
:
Glutaredoxin
(617)
Bread wheat (Aegilops tauschii)
(1)
1a
1gwcA01
A:4-83
1b
1gwcB01
B:4-83
1c
1gwcC01
C:4-83
Class
:
Mainly Alpha
(13335)
Architecture
:
Up-down Bundle
(3216)
Topology
:
Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2
(267)
Homologous Superfamily
:
[code=1.20.1050.10, no name defined]
(249)
Bread wheat (Aegilops tauschii)
(1)
2a
1gwcA02
A:84-224
2b
1gwcB02
B:84-224
2c
1gwcC02
C:84-224
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Pfam Domains
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Asymmetric Unit 1
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Asym.Unit (127 KB)
Header - Asym.Unit
Biol.Unit 1 (42 KB)
Header - Biol.Unit 1
Biol.Unit 2 (42 KB)
Header - Biol.Unit 2
Biol.Unit 3 (42 KB)
Header - Biol.Unit 3
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