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1GSE
Asym. Unit
Info
Asym.Unit (90 KB)
Biol.Unit 1 (84 KB)
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(1)
Title
:
GLUTATHIONE TRANSFERASE A1-1 COMPLEXED WITH AN ETHACRYNIC ACID GLUTATHIONE CONJUGATE (MUTANT R15K)
Authors
:
A. D. Cameron, T. A. Jones
Date
:
09 Jun 95 (Deposition) - 15 Sep 95 (Release) - 14 Dec 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.00
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
A1-1, Transferase (Glutathione)
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
A. D. Cameron, I. Sinning, G. L'Hermite, B. Olin, P. G. Board, B. Mannervik, T. A. Jones
Structural Analysis Of Human Alpha-Class Glutathione Transferase A1-1 In The Apo-Form And In Complexes With Ethacrynic Acid And Its Glutathione Conjugate.
Structure V. 3 717 1995
(for further references see the
PDB file header
)
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Hetero Components
(3, 8)
Info
All Hetero Components
1a: BETA-MERCAPTOETHANOL (BMEa)
1b: BETA-MERCAPTOETHANOL (BMEb)
1c: BETA-MERCAPTOETHANOL (BMEc)
1d: BETA-MERCAPTOETHANOL (BMEd)
2a: ETHACRYNIC ACID (EAAa)
2b: ETHACRYNIC ACID (EAAb)
3a: GLUTATHIONE (GSHa)
3b: GLUTATHIONE (GSHb)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
BME
4
Ligand/Ion
BETA-MERCAPTOETHANOL
2
EAA
2
Ligand/Ion
ETHACRYNIC ACID
3
GSH
2
Ligand/Ion
GLUTATHIONE
[
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]
Sites
(8, 8)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
7: AC7 (SOFTWARE)
8: AC8 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
TYR A:9 , ARG A:45 , GLN A:54 , VAL A:55 , PRO A:56 , GLN A:67 , THR A:68 , EAA A:224 , HOH A:236 , HOH A:297 , HOH A:406 , ASP B:101 , ARG B:131 , HOH B:285
BINDING SITE FOR RESIDUE GSH A 223
2
AC2
SOFTWARE
TYR A:9 , PHE A:10 , ARG A:13 , GLY A:14 , LYS A:15 , LEU A:107 , LEU A:108 , VAL A:111 , MET A:208 , ALA A:216 , PHE A:220 , PHE A:222 , GSH A:223 , HOH A:312
BINDING SITE FOR RESIDUE EAA A 224
3
AC3
SOFTWARE
SER A:18 , ILE A:96 , BME A:226 , HOH A:378
BINDING SITE FOR RESIDUE BME A 225
4
AC4
SOFTWARE
ARG A:69 , LEU A:72 , ILE A:96 , GLU A:97 , HIS A:159 , BME A:225 , HOH A:227 , HOH A:289 , HOH A:379
BINDING SITE FOR RESIDUE BME A 226
5
AC5
SOFTWARE
ASP A:101 , ARG A:131 , HOH A:284 , TYR B:9 , ARG B:45 , GLN B:54 , VAL B:55 , PRO B:56 , GLN B:67 , THR B:68 , EAA B:224 , HOH B:242 , HOH B:300 , HOH B:301 , HOH B:320
BINDING SITE FOR RESIDUE GSH B 223
6
AC6
SOFTWARE
TYR B:9 , PHE B:10 , ARG B:13 , GLY B:14 , LYS B:15 , LEU B:107 , LEU B:108 , PRO B:110 , VAL B:111 , MET B:208 , ALA B:216 , PHE B:220 , GSH B:223 , HOH B:241 , HOH B:316
BINDING SITE FOR RESIDUE EAA B 224
7
AC7
SOFTWARE
SER B:18 , ILE B:96 , BME B:226 , HOH B:344
BINDING SITE FOR RESIDUE BME B 225
8
AC8
SOFTWARE
ARG B:69 , ILE B:96 , GLU B:97 , HIS B:159 , BME B:225 , HOH B:233 , HOH B:291
BINDING SITE FOR RESIDUE BME B 226
[
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]
SAPs(SNPs)/Variants
(3, 6)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_033978 (T19I, chain A/B, )
2: VAR_049482 (P113Q, chain A/B, )
3: VAR_049483 (K117Q, chain A/B, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_033978
T
19
I
GSTA1_HUMAN
Polymorphism
1051578
A/B
T
19
I
2
UniProt
VAR_049482
P
113
Q
GSTA1_HUMAN
Polymorphism
1051745
A/B
P
113
Q
3
UniProt
VAR_049483
K
117
Q
GSTA1_HUMAN
Polymorphism
1051757
A/B
K
117
Q
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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]
PROSITE Patterns/Profiles
(2, 4)
Info
All PROSITE Patterns/Profiles
1: GST_NTER (A:3-83,B:3-83)
2: GST_CTER (A:85-207,B:85-207)
;
View:
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
GST_NTER
PS50404
Soluble glutathione S-transferase N-terminal domain profile.
GSTA1_HUMAN
3-83
2
A:3-83
B:3-83
2
GST_CTER
PS50405
Soluble glutathione S-transferase C-terminal domain profile.
GSTA1_HUMAN
85-207
2
A:85-207
B:85-207
[
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Exons
(6, 12)
Info
All Exons
Exon 1.2 (A:2-29 | B:2-29)
Exon 1.3 (A:30-47 | B:30-47)
Exon 1.4 (A:47-91 | B:47-91)
Exon 1.5b (A:91-138 | B:91-138)
Exon 1.6 (A:139-182 | B:139-182)
Exon 1.7 (A:183-222 | B:183-222)
View:
Select:
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All Exon Boundaries
1: Boundary 1.1a/1.2
2: Boundary 1.2/1.3
3: Boundary 1.3/1.4
4: Boundary 1.4/1.5b
5: Boundary 1.5b/1.6
6: Boundary 1.6/1.7
7: Boundary 1.7/-
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1a
ENST00000334575
1a
ENSE00002201258
chr6:
52668708-52668583
126
GSTA1_HUMAN
-
0
0
-
-
1.2
ENST00000334575
2
ENSE00002162073
chr6:
52664095-52663979
117
GSTA1_HUMAN
1-29
29
2
A:2-29
B:2-29
28
28
1.3
ENST00000334575
3
ENSE00002190926
chr6:
52662435-52662384
52
GSTA1_HUMAN
30-47
18
2
A:30-47
B:30-47
18
18
1.4
ENST00000334575
4
ENSE00002186617
chr6:
52661112-52660980
133
GSTA1_HUMAN
47-91
45
2
A:47-91
B:47-91
45
45
1.5b
ENST00000334575
5b
ENSE00002141355
chr6:
52659064-52658923
142
GSTA1_HUMAN
91-138
48
2
A:91-138
B:91-138
48
48
1.6
ENST00000334575
6
ENSE00002159902
chr6:
52657785-52657654
132
GSTA1_HUMAN
139-182
44
2
A:139-182
B:139-182
44
44
1.7
ENST00000334575
7
ENSE00002170665
chr6:
52656778-52656462
317
GSTA1_HUMAN
183-222
40
2
A:183-222
B:183-222
40
40
[
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]
SCOP Domains
(2, 4)
Info
All SCOP Domains
1a: SCOP_d1gsea1 (A:81-222)
1b: SCOP_d1gseb1 (B:81-222)
2a: SCOP_d1gsea2 (A:2-80)
2b: SCOP_d1gseb2 (B:2-80)
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)
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Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All alpha proteins
(14657)
Fold
:
GST C-terminal domain-like
(353)
Superfamily
:
GST C-terminal domain-like
(353)
Family
:
Glutathione S-transferase (GST), C-terminal domain
(263)
Protein domain
:
Class alpha GST
(53)
Human (Homo sapiens), (a1-1) [TaxId: 9606]
(27)
1a
d1gsea1
A:81-222
1b
d1gseb1
B:81-222
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
Thioredoxin fold
(994)
Superfamily
:
Thioredoxin-like
(992)
Family
:
Glutathione S-transferase (GST), N-terminal domain
(216)
Protein domain
:
Class alpha GST
(53)
Human (Homo sapiens), (a1-1) [TaxId: 9606]
(27)
2a
d1gsea2
A:2-80
2b
d1gseb2
B:2-80
[
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CATH Domains
(2, 4)
Info
all CATH domains
1a: CATH_1gseA01 (A:2-81,A:191-222)
1b: CATH_1gseB01 (B:2-81,B:191-222)
2a: CATH_1gseA02 (A:82-190)
2b: CATH_1gseB02 (B:82-190)
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Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Glutaredoxin
(620)
Homologous Superfamily
:
Glutaredoxin
(617)
Human (Homo sapiens)
(186)
1a
1gseA01
A:2-81,A:191-222
1b
1gseB01
B:2-81,B:191-222
Class
:
Mainly Alpha
(13335)
Architecture
:
Up-down Bundle
(3216)
Topology
:
Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2
(267)
Homologous Superfamily
:
[code=1.20.1050.10, no name defined]
(249)
Human (Homo sapiens)
(119)
2a
1gseA02
A:82-190
2b
1gseB02
B:82-190
[
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Pfam Domains
(0, 0)
Info
all PFAM domains
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Sorry, no Info available
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