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1GO5
Asym. Unit
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Asym.Unit (448 KB)
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Models
(26 )
Title
:
STRUCTURE OF THE C-TERMINAL FG-BINDING DOMAIN OF HUMAN TAP
Authors
:
R. P. Grant, E. Hurt, D. Neuhaus, M. Stewart
Date
:
18 Oct 01 (Deposition) - 05 Feb 02 (Release) - 24 Feb 09 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A (26 x)
Keywords
:
Nuclear Transport, Mrna Export, Uba, Nucleoporins
(Keyword Search:
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Reference
:
R. P. Grant, E. Hurt, D. Neuhaus, M. Stewart
Structure Of The C-Terminal Fg-Nucleoporin Binding Domain Of Tap/Nxf1
Nat. Struct. Biol. V. 9 247 2002
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Hetero Components
(0, 0)
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Sites
(0, 0)
Info
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available in "Model" view)
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: TAP_C (A:16-70)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
TAP_C
PS51281
TAP C-terminal (TAP-C) domain profile.
NXF1_HUMAN
565-619
1
A:16-70
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Exons
(3, 3)
Info
All Exons
Exon 1.20c (A:2-38)
Exon 1.21a (A:38-58)
Exon 1.21h (A:59-70)
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All Exon Boundaries
1: Boundary 1.19b/1.20c
2: Boundary 1.20c/1.21a
3: Boundary 1.21a/1.21h
4: Boundary 1.21h/-
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.2b
ENST00000294172
2b
ENSE00001198395
chr11:
62572964-62572801
164
NXF1_HUMAN
1-10
10
0
-
-
1.4e
ENST00000294172
4e
ENSE00001063544
chr11:
62571450-62571264
187
NXF1_HUMAN
10-72
63
0
-
-
1.4g
ENST00000294172
4g
ENSE00001198378
chr11:
62571044-62570891
154
NXF1_HUMAN
72-123
52
0
-
-
1.5b
ENST00000294172
5b
ENSE00001198363
chr11:
62569732-62569649
84
NXF1_HUMAN
124-151
28
0
-
-
1.6c
ENST00000294172
6c
ENSE00001198351
chr11:
62569518-62569414
105
NXF1_HUMAN
152-186
35
0
-
-
1.7
ENST00000294172
7
ENSE00001198338
chr11:
62569291-62569211
81
NXF1_HUMAN
187-213
27
0
-
-
1.8
ENST00000294172
8
ENSE00001198325
chr11:
62569103-62569034
70
NXF1_HUMAN
214-237
24
0
-
-
1.9
ENST00000294172
9
ENSE00001198312
chr11:
62568889-62568801
89
NXF1_HUMAN
237-266
30
0
-
-
1.10
ENST00000294172
10
ENSE00001198304
chr11:
62568673-62568566
108
NXF1_HUMAN
267-302
36
0
-
-
1.11a
ENST00000294172
11a
ENSE00001198291
chr11:
62567958-62567849
110
NXF1_HUMAN
303-339
37
0
-
-
1.11g
ENST00000294172
11g
ENSE00001198284
chr11:
62566047-62566011
37
NXF1_HUMAN
339-351
13
0
-
-
1.12
ENST00000294172
12
ENSE00001063548
chr11:
62564858-62564790
69
NXF1_HUMAN
352-374
23
0
-
-
1.13
ENST00000294172
13
ENSE00001063546
chr11:
62564710-62564655
56
NXF1_HUMAN
375-393
19
0
-
-
1.15a
ENST00000294172
15a
ENSE00001063554
chr11:
62564039-62563932
108
NXF1_HUMAN
393-429
37
0
-
-
1.16b
ENST00000294172
16b
ENSE00001141830
chr11:
62563817-62563759
59
NXF1_HUMAN
429-449
21
0
-
-
1.17b
ENST00000294172
17b
ENSE00001141824
chr11:
62563653-62563538
116
NXF1_HUMAN
449-487
39
0
-
-
1.18
ENST00000294172
18
ENSE00001141816
chr11:
62563415-62563373
43
NXF1_HUMAN
488-502
15
0
-
-
1.19b
ENST00000294172
19b
ENSE00001274696
chr11:
62562479-62562407
73
NXF1_HUMAN
502-526
25
0
-
-
1.20c
ENST00000294172
20c
ENSE00001063547
chr11:
62561912-62561730
183
NXF1_HUMAN
526-587
62
1
A:2-38
37
1.21a
ENST00000294172
21a
ENSE00001764908
chr11:
62560173-62560113
61
NXF1_HUMAN
587-607
21
1
A:38-58
21
1.21h
ENST00000294172
21h
ENSE00001198195
chr11:
62559986-62559598
389
NXF1_HUMAN
608-619
12
1
A:59-70
12
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d1go5a_ (A:)
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Organisms
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Class
:
All alpha proteins
(14657)
Fold
:
RuvA C-terminal domain-like
(106)
Superfamily
:
UBA-like
(64)
Family
:
TAP-C domain-like
(3)
Protein domain
:
FG-binding, C-terminal domain of TAP
(2)
Human (Homo sapiens) [TaxId: 9606]
(2)
1a
d1go5a_
A:
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CATH Domains
(1, 1)
Info
all CATH domains
1a: CATH_1go5A00 (A:2-70)
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Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
Helicase, Ruva Protein; domain 3
(218)
Homologous Superfamily
:
DNA helicase RuvA subunit, C-terminal domain
(65)
Human (Homo sapiens)
(10)
1a
1go5A00
A:2-70
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Pfam Domains
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Chain A
Asymmetric Unit 1
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