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1GN2
Biol. Unit 1
Info
Asym.Unit (222 KB)
Biol.Unit 1 (110 KB)
Biol.Unit 2 (111 KB)
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(1)
Title
:
S123C MUTANT OF THE IRON-SUPEROXIDE DISMUTASE FROM MYCOBACTERIUM TUBERCULOSIS.
Authors
:
K. A. Bunting, J. B. Cooper, I. J. Tickle, D. B. Young
Date
:
02 Oct 01 (Deposition) - 05 Oct 01 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
3.40
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H
Biol. Unit 1: A,B,C,D (1x)
Biol. Unit 2: E,F,G,H (1x)
Keywords
:
Oxidoreductase, Iron
(Keyword Search:
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Reference
:
K. A. Bunting, J. B. Cooper, I. J. Tickle, D. B. Young
Engineering Of An Intersubunit Disulfide Bridge In The Iron-Superoxide Dismutase Of Mycobacterium Tuberculosis.
Arch. Biochem. Biophys. V. 397 69 2002
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
Info
All Hetero Components
1a: FE (III) ION (FEa)
1b: FE (III) ION (FEb)
1c: FE (III) ION (FEc)
1d: FE (III) ION (FEd)
1e: FE (III) ION (FEe)
1f: FE (III) ION (FEf)
1g: FE (III) ION (FEg)
1h: FE (III) ION (FEh)
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Sites
(4, 4)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
HIS A:28 , HIS A:76 , ASP A:160 , HIS A:164
BINDING SITE FOR RESIDUE FE A 999
2
AC2
SOFTWARE
HIS B:28 , HIS B:76 , ASP B:160 , HIS B:164
BINDING SITE FOR RESIDUE FE B 999
3
AC3
SOFTWARE
HIS C:28 , HIS C:76 , ASP C:160 , HIS C:164
BINDING SITE FOR RESIDUE FE C 999
4
AC4
SOFTWARE
HIS D:28 , HIS D:76 , ASP D:160 , HIS D:164
BINDING SITE FOR RESIDUE FE D 999
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
(1, 8)
Info
All PROSITE Patterns/Profiles
1: SOD_MN (A:160-167,B:160-167,C:160-167,D:16...)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
SOD_MN
PS00088
Manganese and iron superoxide dismutases signature.
SODF_MYCTO
160-167
4
A:160-167
B:160-167
C:160-167
D:160-167
-
-
-
-
SODF_MYCTU
160-167
4
A:160-167
B:160-167
C:160-167
D:160-167
-
-
-
-
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Exons
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
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SCOP Domains
(2, 16)
Info
All SCOP Domains
1a: SCOP_d1gn2a1 (A:2-85)
1b: SCOP_d1gn2b1 (B:2-85)
1c: SCOP_d1gn2c1 (C:2-85)
1d: SCOP_d1gn2d1 (D:2-85)
1e: SCOP_d1gn2e1 (E:2-85)
1f: SCOP_d1gn2f1 (F:2-85)
1g: SCOP_d1gn2g1 (G:2-85)
1h: SCOP_d1gn2h1 (H:2-85)
2a: SCOP_d1gn2a2 (A:86-199)
2b: SCOP_d1gn2b2 (B:86-199)
2c: SCOP_d1gn2c2 (C:86-199)
2d: SCOP_d1gn2d2 (D:86-199)
2e: SCOP_d1gn2e2 (E:86-199)
2f: SCOP_d1gn2f2 (F:86-199)
2g: SCOP_d1gn2g2 (G:86-199)
2h: SCOP_d1gn2h2 (H:86-199)
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Protein Domains
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)
(
)
Organisms
(
)
(
)
Class
:
All alpha proteins
(14657)
Fold
:
Long alpha-hairpin
(315)
Superfamily
:
Fe,Mn superoxide dismutase (SOD), N-terminal domain
(122)
Family
:
Fe,Mn superoxide dismutase (SOD), N-terminal domain
(80)
Protein domain
:
Fe superoxide dismutase (FeSOD)
(21)
Mycobacterium tuberculosis [TaxId: 1773]
(5)
1a
d1gn2a1
A:2-85
1b
d1gn2b1
B:2-85
1c
d1gn2c1
C:2-85
1d
d1gn2d1
D:2-85
1e
d1gn2e1
E:2-85
1f
d1gn2f1
F:2-85
1g
d1gn2g1
G:2-85
1h
d1gn2h1
H:2-85
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Fe,Mn superoxide dismutase (SOD), C-terminal domain
(122)
Superfamily
:
Fe,Mn superoxide dismutase (SOD), C-terminal domain
(122)
Family
:
Fe,Mn superoxide dismutase (SOD), C-terminal domain
(82)
Protein domain
:
Fe superoxide dismutase (FeSOD)
(21)
Mycobacterium tuberculosis [TaxId: 1773]
(5)
2a
d1gn2a2
A:86-199
2b
d1gn2b2
B:86-199
2c
d1gn2c2
C:86-199
2d
d1gn2d2
D:86-199
2e
d1gn2e2
E:86-199
2f
d1gn2f2
F:86-199
2g
d1gn2g2
G:86-199
2h
d1gn2h2
H:86-199
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CATH Domains
(1, 8)
Info
all CATH domains
1a: CATH_1gn2A01 (A:21-84)
1b: CATH_1gn2C01 (C:21-84)
1c: CATH_1gn2D01 (D:21-84)
1d: CATH_1gn2E01 (E:21-84)
1e: CATH_1gn2F01 (F:21-84)
1f: CATH_1gn2G01 (G:21-84)
1g: CATH_1gn2H01 (H:21-84)
1h: CATH_1gn2B01 (B:21-84)
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Organisms
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Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
Helix Hairpins
(718)
Homologous Superfamily
:
Fe,Mn superoxide dismutase (SOD) domain
(14)
Mycobacterium tuberculosis. Organism_taxid: 1773.
(4)
1a
1gn2A01
A:21-84
1b
1gn2C01
C:21-84
1c
1gn2D01
D:21-84
1d
1gn2E01
E:21-84
1e
1gn2F01
F:21-84
1f
1gn2G01
G:21-84
1g
1gn2H01
H:21-84
1h
1gn2B01
B:21-84
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Pfam Domains
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Asymmetric Unit 1
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Show PDB file:
Asym.Unit (222 KB)
Header - Asym.Unit
Biol.Unit 1 (110 KB)
Header - Biol.Unit 1
Biol.Unit 2 (111 KB)
Header - Biol.Unit 2
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