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1GMX
Asym. Unit
Info
Asym.Unit (46 KB)
Biol.Unit 1 (42 KB)
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(1)
Title
:
ESCHERICHIA COLI GLPE SULFURTRANSFERASE
Authors
:
A. Spallarossa, J. T. Donahue, T. J. Larson, M. Bolognesi, D. Bordo
Date
:
25 Sep 01 (Deposition) - 28 Nov 01 (Release) - 01 Aug 12 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.10
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Transferase, Rhodanese, Sulfurtransferase, Glycerol Metabolism
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
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)
Reference
:
A. Spallarossa, J. T. Donahue, T. J. Larson, M. Bolognesi, D. Bordo
Escherichia Coli Glpe Is A Prototype Sulfurtransferase For The Single-Domain Rhodanese Homology Superfamily
Structure V. 9 1117 2001
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Hetero Components
(3, 10)
Info
All Hetero Components
1a: ACETATE ION (ACTa)
1b: ACETATE ION (ACTb)
2a: S-MERCAPTOCYSTEINE (CSSa)
3a: 1,2-ETHANEDIOL (EDOa)
3b: 1,2-ETHANEDIOL (EDOb)
3c: 1,2-ETHANEDIOL (EDOc)
3d: 1,2-ETHANEDIOL (EDOd)
3e: 1,2-ETHANEDIOL (EDOe)
3f: 1,2-ETHANEDIOL (EDOf)
3g: 1,2-ETHANEDIOL (EDOg)
View:
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Label:
No.
Name
Count
Type
Full Name
1
ACT
2
Ligand/Ion
ACETATE ION
2
CSS
1
Mod. Amino Acid
S-MERCAPTOCYSTEINE
3
EDO
7
Ligand/Ion
1,2-ETHANEDIOL
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Sites
(9, 9)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
7: AC7 (SOFTWARE)
8: AC8 (SOFTWARE)
9: AC9 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ARG A:53 , HOH A:2094 , HOH A:2095
BINDING SITE FOR RESIDUE ACT A1110
2
AC2
SOFTWARE
ASN A:8 , VAL A:9 , ALA A:10 , GLN A:99
BINDING SITE FOR RESIDUE ACT A1111
3
AC3
SOFTWARE
HIS A:13 , GLN A:14 , GLN A:17 , HOH A:2096
BINDING SITE FOR RESIDUE EDO A1112
4
AC4
SOFTWARE
MET A:1 , ASP A:2 , ILE A:7 , ASN A:8 , ASP A:84 , ASP A:90 , HOH A:2097
BINDING SITE FOR RESIDUE EDO A1113
5
AC5
SOFTWARE
MET A:1 , GLN A:3 , PHE A:4 , GLU A:5 , ASP A:84 , VAL A:85 , VAL A:86
BINDING SITE FOR RESIDUE EDO A1114
6
AC6
SOFTWARE
THR A:44 , ASN A:45 , ALA A:74 , TYR A:106 , ALA A:108 , HOH A:2089 , HOH A:2093
BINDING SITE FOR RESIDUE EDO A1115
7
AC7
SOFTWARE
GLY A:73 , GLN A:76 , TYR A:77 , GLN A:80 , TYR A:106
BINDING SITE FOR RESIDUE EDO A1116
8
AC8
SOFTWARE
MET A:1 , GLU A:5 , CYS A:6 , ASP A:84 , VAL A:85 , HOH A:2008
BINDING SITE FOR RESIDUE EDO A1117
9
AC9
SOFTWARE
GLU A:18 , GLU A:20 , ASP A:56 , ASP A:58 , HOH A:2061 , HOH A:2100
BINDING SITE FOR RESIDUE EDO A1118
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: RHODANESE_3 (A:17-105)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
RHODANESE_3
PS50206
Rhodanese domain profile.
GLPE_ECOLI
17-105
1
A:17-105
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Exons
(0, 0)
Info
All Exons
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All Exon Boundaries
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d1gmxa_ (A:)
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Folds
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)
Superfamilies
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)
(
)
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)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
Rhodanese/Cell cycle control phosphatase
(39)
Superfamily
:
Rhodanese/Cell cycle control phosphatase
(39)
Family
:
Single-domain sulfurtransferase
(4)
Protein domain
:
Sulfurtransferase GlpE
(2)
Escherichia coli [TaxId: 562]
(2)
1a
d1gmxa_
A:
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CATH Domains
(1, 1)
Info
all CATH domains
1a: CATH_1gmxA00 (A:1-108)
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Homologous Superfamilies
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)
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)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Oxidized Rhodanese; domain 1
(42)
Homologous Superfamily
:
Oxidized Rhodanese, domain 1
(42)
Escherichia coli. Organism_taxid: 469008. Strain: bl21(de3).
(2)
1a
1gmxA00
A:1-108
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Pfam Domains
(0, 0)
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all PFAM domains
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Atom Selection
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Chain A
Asymmetric Unit 1
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Asym.Unit (46 KB)
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