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1GMO
Asym. Unit
Info
Asym.Unit (249 KB)
Biol.Unit 1 (68 KB)
Biol.Unit 2 (63 KB)
Biol.Unit 3 (62 KB)
Biol.Unit 4 (60 KB)
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(1)
Title
:
CRYSTAL STRUCTURES OF NK1-HEPARIN COMPLEXES REVEAL THE BASIS FOR NK1 ACTIVITY AND ENABLE ENGINEERING OF POTENT AGONISTS OF THE MET RECEPTOR
Authors
:
D. Lietha, D. Y. Chirgadze, B. Mulloy, T. L. Blundell, E. Gherardi
Date
:
20 Sep 01 (Deposition) - 02 Oct 01 (Release) - 12 Jul 17 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
3.00
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H
Biol. Unit 1: A,B (1x)
Biol. Unit 2: C,D (1x)
Biol. Unit 3: E,F (1x)
Biol. Unit 4: G,H (1x)
Keywords
:
Hormone, Growth Factor
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
D. Lietha, D. Y. Chirgadze, B. Mulloy, T. L. Blundell, E. Gherardi
Crystal Structures Of Nk1-Heparin Complexes Reveal The Basi For Nk1 Activity And Enable Engineering Of Potent Agonists Of The Met Receptor
Embo J. V. 20 5543 2001
[
close entry info
]
Hetero Components
(4, 58)
Info
All Hetero Components
1a: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ET... (EPEa)
1b: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ET... (EPEb)
1c: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ET... (EPEc)
1d: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ET... (EPEd)
1e: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ET... (EPEe)
1f: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ET... (EPEf)
1g: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ET... (EPEg)
1h: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ET... (EPEh)
2a: 2-O-SULFO-ALPHA-L-IDOPYRANURONIC A... (IDSa)
2b: 2-O-SULFO-ALPHA-L-IDOPYRANURONIC A... (IDSb)
2c: 2-O-SULFO-ALPHA-L-IDOPYRANURONIC A... (IDSc)
2d: 2-O-SULFO-ALPHA-L-IDOPYRANURONIC A... (IDSd)
2e: 2-O-SULFO-ALPHA-L-IDOPYRANURONIC A... (IDSe)
2f: 2-O-SULFO-ALPHA-L-IDOPYRANURONIC A... (IDSf)
2g: 2-O-SULFO-ALPHA-L-IDOPYRANURONIC A... (IDSg)
2h: 2-O-SULFO-ALPHA-L-IDOPYRANURONIC A... (IDSh)
2i: 2-O-SULFO-ALPHA-L-IDOPYRANURONIC A... (IDSi)
2j: 2-O-SULFO-ALPHA-L-IDOPYRANURONIC A... (IDSj)
2k: 2-O-SULFO-ALPHA-L-IDOPYRANURONIC A... (IDSk)
2l: 2-O-SULFO-ALPHA-L-IDOPYRANURONIC A... (IDSl)
2m: 2-O-SULFO-ALPHA-L-IDOPYRANURONIC A... (IDSm)
2n: 2-O-SULFO-ALPHA-L-IDOPYRANURONIC A... (IDSn)
2o: 2-O-SULFO-ALPHA-L-IDOPYRANURONIC A... (IDSo)
2p: 2-O-SULFO-ALPHA-L-IDOPYRANURONIC A... (IDSp)
2q: 2-O-SULFO-ALPHA-L-IDOPYRANURONIC A... (IDSq)
2r: 2-O-SULFO-ALPHA-L-IDOPYRANURONIC A... (IDSr)
2s: 2-O-SULFO-ALPHA-L-IDOPYRANURONIC A... (IDSs)
2t: 2-O-SULFO-ALPHA-L-IDOPYRANURONIC A... (IDSt)
2u: 2-O-SULFO-ALPHA-L-IDOPYRANURONIC A... (IDSu)
3a: N,O6-DISULFO-GLUCOSAMINE (SGNa)
3b: N,O6-DISULFO-GLUCOSAMINE (SGNb)
3c: N,O6-DISULFO-GLUCOSAMINE (SGNc)
3d: N,O6-DISULFO-GLUCOSAMINE (SGNd)
3e: N,O6-DISULFO-GLUCOSAMINE (SGNe)
3f: N,O6-DISULFO-GLUCOSAMINE (SGNf)
3g: N,O6-DISULFO-GLUCOSAMINE (SGNg)
3h: N,O6-DISULFO-GLUCOSAMINE (SGNh)
3i: N,O6-DISULFO-GLUCOSAMINE (SGNi)
3j: N,O6-DISULFO-GLUCOSAMINE (SGNj)
3k: N,O6-DISULFO-GLUCOSAMINE (SGNk)
3l: N,O6-DISULFO-GLUCOSAMINE (SGNl)
3m: N,O6-DISULFO-GLUCOSAMINE (SGNm)
3n: N,O6-DISULFO-GLUCOSAMINE (SGNn)
3o: N,O6-DISULFO-GLUCOSAMINE (SGNo)
3p: N,O6-DISULFO-GLUCOSAMINE (SGNp)
3q: N,O6-DISULFO-GLUCOSAMINE (SGNq)
3r: N,O6-DISULFO-GLUCOSAMINE (SGNr)
3s: N,O6-DISULFO-GLUCOSAMINE (SGNs)
3t: N,O6-DISULFO-GLUCOSAMINE (SGNt)
3u: N,O6-DISULFO-GLUCOSAMINE (SGNu)
4a: SULFATE ION (SO4a)
4b: SULFATE ION (SO4b)
4c: SULFATE ION (SO4c)
4d: SULFATE ION (SO4d)
4e: SULFATE ION (SO4e)
4f: SULFATE ION (SO4f)
4g: SULFATE ION (SO4g)
4h: SULFATE ION (SO4h)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
EPE
8
Ligand/Ion
4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID
2
IDS
21
Ligand/Ion
2-O-SULFO-ALPHA-L-IDOPYRANURONIC ACID
3
SGN
21
Ligand/Ion
N,O6-DISULFO-GLUCOSAMINE
4
SO4
8
Ligand/Ion
SULFATE ION
[
close Hetero Component info
]
Sites
(22, 22)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: AD1 (SOFTWARE)
11: AD2 (SOFTWARE)
12: AD3 (SOFTWARE)
13: AD4 (SOFTWARE)
14: AD5 (SOFTWARE)
15: AD6 (SOFTWARE)
16: AD7 (SOFTWARE)
17: AD8 (SOFTWARE)
18: AD9 (SOFTWARE)
19: AE1 (SOFTWARE)
20: AE2 (SOFTWARE)
21: AE3 (SOFTWARE)
22: AE4 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
PRO A:164 , GLY A:169 , ASP A:171 , LEU A:172 , GLN A:173
binding site for residue SO4 A 307
02
AC2
SOFTWARE
PHE A:162 , GLU A:183 , GLU A:184 , GLY A:185 , GLY A:186 , TRP A:188 , PHE A:190 , ARG A:197 , TYR A:198 , VAL A:200 , GLU C:111 , PHE C:112
binding site for residue EPE A 308
03
AC3
SOFTWARE
ARG B:126 , ILE B:129 , ILE B:130 , GLY B:133 , ARG B:134 , SER B:135 , TYR B:136 , HOH B:412
binding site for residue SO4 B 308
04
AC4
SOFTWARE
PHE B:162 , GLU B:183 , GLU B:184 , GLY B:185 , GLY B:186 , TRP B:188 , PHE B:190 , ARG B:197 , TYR B:198 , HOH B:407
binding site for residue EPE B 317
05
AC5
SOFTWARE
SGN B:310 , ARG C:126 , ILE C:129 , ILE C:130 , GLY C:133 , ARG C:134 , SER C:135 , TYR C:136
binding site for residue SO4 C 301
06
AC6
SOFTWARE
GLU C:183 , GLU C:184 , GLY C:185 , GLY C:186 , TRP C:188 , PHE C:190 , ARG C:197 , TYR C:198 , HOH C:407 , HOH C:410 , GLU E:159 , ARG E:197
binding site for residue EPE C 311
07
AC7
SOFTWARE
ARG D:126 , ILE D:129 , ILE D:130 , GLY D:133 , ARG D:134 , SER D:135 , TYR D:136 , HOH D:401 , HOH D:408
binding site for residue SO4 D 301
08
AC8
SOFTWARE
PHE D:162 , GLU D:183 , GLU D:184 , GLY D:186 , TRP D:188 , PHE D:190 , ARG D:197 , TYR D:198
binding site for residue EPE D 302
09
AC9
SOFTWARE
ARG E:126 , ILE E:129 , ILE E:130 , GLY E:133 , ARG E:134 , SER E:135 , TYR E:136 , HOH E:418
binding site for residue SO4 E 301
10
AD1
SOFTWARE
GLU C:159 , ARG E:181 , GLU E:184 , GLY E:185 , GLY E:186 , TRP E:188 , ARG E:197 , TYR E:198
binding site for residue EPE E 302
11
AD2
SOFTWARE
ARG F:126 , ILE F:129 , ILE F:130 , GLY F:133 , ARG F:134 , SER F:135 , TYR F:136
binding site for residue SO4 F 307
12
AD3
SOFTWARE
TYR F:167 , ARG F:168 , GLY F:169 , ASP F:171 , LEU F:172 , GLN F:173
binding site for residue SO4 F 308
13
AD4
SOFTWARE
GLU F:183 , TRP F:188 , TYR F:198 , GLU F:199 , VAL F:200 , GLU G:159
binding site for residue EPE F 309
14
AD5
SOFTWARE
PHE G:162 , GLU G:183 , GLU G:184 , GLY G:186 , TRP G:188 , PHE G:190 , ARG G:197 , TYR G:198 , HOH G:408
binding site for residue EPE G 307
15
AD6
SOFTWARE
ARG H:168 , GLY H:169 , ASP H:171 , LEU H:172 , GLN H:173 , HOH H:2002
binding site for residue SO4 H 301
16
AD7
SOFTWARE
PHE H:162 , GLU H:183 , GLY H:186 , TRP H:188 , PHE H:190 , ARG H:197 , TYR H:198 , VAL H:200
binding site for residue EPE H 302
17
AD8
SOFTWARE
LYS A:60 , THR A:61 , LYS A:62 , GLN A:95 , HOH A:408 , ILE E:59 , LYS E:60 , THR E:61 , LYS E:62 , LYS E:63 , VAL E:64 , ARG E:73 , GLY E:79
binding site for Poly-Saccharide residues IDS A 301 through SGN A 306
18
AD9
SOFTWARE
LYS A:60 , THR A:61 , LYS A:62 , GLN A:95 , PRO A:164 , GLY A:169 , ASP A:171 , LEU A:172 , GLN A:173 , HOH A:408 , TYR B:167 , ARG B:168 , GLY B:169 , LYS B:170 , PRO B:180 , ARG B:181 , GLY B:182 , ILE E:59 , LYS E:60 , THR E:61 , LYS E:62 , LYS E:63 , VAL E:64 , ARG E:73 , GLY E:79 , LYS H:60 , THR H:61 , LYS H:62 , LYS H:63 , GLN H:69 , LYS H:78 , GLY H:79
binding site for Poly-Saccharide residues IDS B 301 through IDS B 307
19
AE1
SOFTWARE
TYR A:167 , ARG A:168 , LYS A:170 , ILE B:59 , LYS B:60 , THR B:61 , LYS B:62 , LYS B:63 , VAL B:64 , ARG B:73 , ARG B:76 , LYS B:78 , GLY B:79 , TYR B:167 , LYS B:170 , PRO B:180 , ARG B:181 , GLY B:182 , IDS B:301 , HOH B:414 , HOH B:421 , LYS C:132 , ARG C:134 , GLU C:184 , SO4 C:301 , LYS H:60 , THR H:61 , LYS H:62 , LYS H:63 , GLN H:69 , LYS H:78 , GLY H:79
binding site for Poly-Saccharide residues IDS B 309 through SGN B 316
20
AE2
SOFTWARE
TYR A:167 , ARG A:168 , LYS A:170 , ILE B:59 , LYS B:60 , THR B:61 , LYS B:62 , LYS B:63 , VAL B:64 , ARG B:73 , ARG B:76 , LYS B:78 , GLY B:79 , ARG B:126 , ILE B:129 , ILE B:130 , GLY B:133 , ARG B:134 , SER B:135 , TYR B:136 , TYR B:167 , LYS B:170 , PRO B:180 , ARG B:181 , GLY B:182 , IDS B:301 , HOH B:412 , HOH B:414 , HOH B:421 , LYS C:60 , THR C:61 , LYS C:62 , LYS C:63 , GLN C:69 , ARG C:73 , ARG C:76 , LYS C:78 , GLY C:79 , LYS C:132 , ARG C:134 , GLU C:183 , GLU C:184 , GLY C:185 , GLY C:186 , TRP C:188 , PHE C:190 , ARG C:197 , TYR C:198 , SO4 C:301 , HOH C:407 , HOH C:410 , HOH C:415 , HOH C:418 , HOH C:419 , SER D:166 , TYR D:167 , ARG D:168 , GLU E:159 , ARG E:197 , ARG F:134 , TYR F:167 , ARG F:168 , ARG F:181 , GLY F:182 , SER G:154 , ILE G:156 , LYS H:60 , THR H:61 , LYS H:62 , LYS H:63 , GLN H:69 , LYS H:78 , GLY H:79
binding site for Poly-Saccharide residues SGN C 302 through SGN C 310
21
AE3
SOFTWARE
SGN B:310 , LYS C:60 , THR C:61 , LYS C:62 , LYS C:63 , GLN C:69 , ARG C:73 , ARG C:76 , LYS C:78 , GLY C:79 , ARG C:126 , ILE C:129 , ILE C:130 , GLY C:133 , ARG C:134 , SER C:135 , TYR C:136 , HOH C:415 , HOH C:418 , HOH C:419 , SER D:166 , TYR D:167 , ARG D:168 , ILE F:59 , THR F:61 , LYS F:62 , LYS F:63 , VAL F:64 , GLN F:69 , ARG F:73 , LYS F:78 , GLY F:79 , ARG F:126 , ILE F:129 , ILE F:130 , GLY F:133 , ARG F:134 , SER F:135 , TYR F:136 , TYR F:167 , ARG F:168 , GLY F:169 , ASP F:171 , LEU F:172 , GLN F:173 , ARG F:181 , GLY F:182 , GLU F:183 , TRP F:188 , TYR F:198 , GLU F:199 , VAL F:200 , HOH F:405 , SER G:154 , ILE G:156 , GLU G:159 , ARG H:181
binding site for Poly-Saccharide residues SGN F 301 through IDS F 306
22
AE4
SOFTWARE
LYS D:60 , THR D:61 , LYS D:63 , ARG D:73 , LYS D:78 , GLY D:79 , GLN D:95 , TRP D:98 , ILE F:59 , THR F:61 , LYS F:62 , LYS F:63 , VAL F:64 , GLN F:69 , ARG F:73 , LYS F:78 , GLY F:79 , HOH F:405 , LYS G:60 , THR G:61 , LYS G:62 , LYS G:63 , ARG G:73 , GLY G:79 , ARG H:181
binding site for Poly-Saccharide residues SGN G 301 through IDS G 306
[
close Site info
]
SAPs(SNPs)/Variants
(1, 8)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_014570 (S153I, chain A/B/C/D/E/F/G/H, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_014570
S
153
I
HGF_HUMAN
Polymorphism
17566
A/B/C/D/E/F/G/H
S
153
I
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
[
close SNP/Variant info
]
PROSITE Patterns/Profiles
(3, 22)
Info
All PROSITE Patterns/Profiles
1: PAN (A:37-123,B:37-123,C:37-123,D:37-12...)
2: KRINGLE_2 (A:127-206,B:127-206,C:127-206,D:12...)
3: KRINGLE_1 (A:176-189,B:176-189,C:176-189,D:17...)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
PAN
PS50948
PAN/Apple domain profile.
HGF_HUMAN
37-123
6
A:37-123
B:37-123
C:37-123
D:37-123
E:37-123
F:37-123
2
KRINGLE_2
PS50070
Kringle domain profile.
HGF_HUMAN
127-206
210-288
304-383
390-469
8
A:127-206
B:127-206
C:127-206
D:127-206
E:127-206
F:127-206
G:127-206
H:127-206
-
-
-
3
KRINGLE_1
PS00021
Kringle domain signature.
HGF_HUMAN
176-189
259-271
353-365
439-452
8
A:176-189
B:176-189
C:176-189
D:176-189
E:176-189
F:176-189
G:176-189
H:176-189
-
-
-
[
close PROSITE info
]
Exons
(5, 40)
Info
All Exons
Exon 1.3b (A:37-85 | B:37-85 | C:37-85 | D:37...)
Exon 1.4b (A:85-123 | B:85-123 | C:85-123 | D...)
Exon 1.5b (A:123-161 | B:123-161 | C:123-161 ...)
Exon 1.6a (A:161-209 | B:161-209 | C:161-209 ...)
Exon 1.7 (A:209-209 | B:209-209 | C:209-209 ...)
View:
Select:
Label:
All Exon Boundaries
1: Boundary 1.2a/1.3b
2: Boundary 1.3b/1.4b
3: Boundary 1.4b/1.5b
4: Boundary 1.5b/1.6a
5: Boundary 1.6a/1.7
6: Boundary 1.7/1.8
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.2a
ENST00000222390
2a
ENSE00001949645
chr7:
81399514-81399200
315
HGF_HUMAN
1-30
30
0
-
-
1.3b
ENST00000222390
3b
ENSE00000698746
chr7:
81392188-81392023
166
HGF_HUMAN
30-85
56
8
A:37-85
B:37-85
C:37-85
D:37-85
E:37-85
F:37-85
G:38-85 (gaps)
H:38-85
49
49
49
49
49
49
48
48
1.4b
ENST00000222390
4b
ENSE00001790262
chr7:
81388120-81388008
113
HGF_HUMAN
85-123
39
8
A:85-123
B:85-123
C:85-123
D:85-123
E:85-123
F:85-123
G:85-123
H:85-123
39
39
39
39
39
39
39
39
1.5b
ENST00000222390
5b
ENSE00000698725
chr7:
81386619-81386505
115
HGF_HUMAN
123-161
39
8
A:123-161
B:123-161
C:123-161
D:123-161
E:123-161
F:123-161
G:123-161
H:123-161
39
39
39
39
39
39
39
39
1.6a
ENST00000222390
6a
ENSE00000698723
chr7:
81381578-81381436
143
HGF_HUMAN
161-209
49
8
A:161-209
B:161-209
C:161-209
D:161-209
E:161-209
F:161-209
G:161-209
H:161-209
49
49
49
49
49
49
49
49
1.7
ENST00000222390
7
ENSE00000698721
chr7:
81374436-81374316
121
HGF_HUMAN
209-249
41
8
A:209-209
B:209-209
C:209-209
D:209-209
E:209-210
F:209-210
G:209-209
H:209-209
1
1
1
1
2
2
1
1
1.8
ENST00000222390
8
ENSE00000698671
chr7:
81372787-81372669
119
HGF_HUMAN
249-289
41
0
-
-
1.10
ENST00000222390
10
ENSE00000698668
chr7:
81359095-81358921
175
HGF_HUMAN
289-347
59
0
-
-
1.11
ENST00000222390
11
ENSE00000698665
chr7:
81355333-81355206
128
HGF_HUMAN
347-390
44
0
-
-
1.12
ENST00000222390
12
ENSE00000698663
chr7:
81350163-81350061
103
HGF_HUMAN
390-424
35
0
-
-
1.13
ENST00000222390
13
ENSE00000698662
chr7:
81346681-81346548
134
HGF_HUMAN
424-469
46
0
-
-
1.14
ENST00000222390
14
ENSE00000698661
chr7:
81340835-81340797
39
HGF_HUMAN
469-482
14
0
-
-
1.15
ENST00000222390
15
ENSE00000698660
chr7:
81339559-81339463
97
HGF_HUMAN
482-514
33
0
-
-
1.16
ENST00000222390
16
ENSE00000698659
chr7:
81336680-81336606
75
HGF_HUMAN
514-539
26
0
-
-
1.17
ENST00000222390
17
ENSE00000698658
chr7:
81335743-81335603
141
HGF_HUMAN
539-586
48
0
-
-
1.18
ENST00000222390
18
ENSE00000698657
chr7:
81335069-81334963
107
HGF_HUMAN
586-622
37
0
-
-
1.19
ENST00000222390
19
ENSE00000698655
chr7:
81334851-81334706
146
HGF_HUMAN
622-670
49
0
-
-
1.20b
ENST00000222390
20b
ENSE00001870741
chr7:
81332073-81328322
3752
HGF_HUMAN
671-728
58
0
-
-
[
close EXON info
]
SCOP Domains
(2, 16)
Info
All SCOP Domains
1a: SCOP_d1gmoa1 (A:37-125)
1b: SCOP_d1gmob1 (B:37-125)
1c: SCOP_d1gmoc1 (C:37-125)
1d: SCOP_d1gmod1 (D:37-125)
1e: SCOP_d1gmoe1 (E:37-125)
1f: SCOP_d1gmof1 (F:37-125)
1g: SCOP_d1gmog1 (G:38-125)
1h: SCOP_d1gmoh1 (H:38-125)
2a: SCOP_d1gmoa2 (A:126-208)
2b: SCOP_d1gmob2 (B:126-208)
2c: SCOP_d1gmoc2 (C:126-208)
2d: SCOP_d1gmod2 (D:126-208)
2e: SCOP_d1gmoe2 (E:126-209)
2f: SCOP_d1gmof2 (F:126-209)
2g: SCOP_d1gmog2 (G:126-208)
2h: SCOP_d1gmoh2 (H:126-208)
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Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Small proteins
(3458)
Fold
:
Hairpin loop containing domain-like
(17)
Superfamily
:
Hairpin loop containing domain-like
(17)
Family
:
Hairpin loop containing domain
(15)
Protein domain
:
Hepatocyte growth factor
(11)
Human (Homo sapiens) [TaxId: 9606]
(11)
1a
d1gmoa1
A:37-125
1b
d1gmob1
B:37-125
1c
d1gmoc1
C:37-125
1d
d1gmod1
D:37-125
1e
d1gmoe1
E:37-125
1f
d1gmof1
F:37-125
1g
d1gmog1
G:38-125
1h
d1gmoh1
H:38-125
Fold
:
Kringle-like
(68)
Superfamily
:
Kringle-like
(68)
Family
:
Kringle modules
(54)
Protein domain
:
NK1 fragment of hepatocyte growth factor
(8)
Human (Homo sapiens) [TaxId: 9606]
(8)
2a
d1gmoa2
A:126-208
2b
d1gmob2
B:126-208
2c
d1gmoc2
C:126-208
2d
d1gmod2
D:126-208
2e
d1gmoe2
E:126-209
2f
d1gmof2
F:126-209
2g
d1gmog2
G:126-208
2h
d1gmoh2
H:126-208
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CATH Domains
(2, 16)
Info
all CATH domains
1a: CATH_1gmoH01 (H:38-125)
1b: CATH_1gmoB01 (B:37-125)
1c: CATH_1gmoC01 (C:37-125)
1d: CATH_1gmoD01 (D:37-125)
1e: CATH_1gmoE01 (E:37-125)
1f: CATH_1gmoF01 (F:37-125)
1g: CATH_1gmoG01 (G:38-125)
1h: CATH_1gmoA01 (A:37-125)
2a: CATH_1gmoE02 (E:126-209)
2b: CATH_1gmoF02 (F:126-209)
2c: CATH_1gmoA02 (A:126-208)
2d: CATH_1gmoB02 (B:126-208)
2e: CATH_1gmoC02 (C:126-208)
2f: CATH_1gmoD02 (D:126-208)
2g: CATH_1gmoH02 (H:126-208)
2h: CATH_1gmoG02 (G:126-207)
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Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(bba) Sandwich
(528)
Topology
:
Hepatocyte Growth Factor
(13)
Homologous Superfamily
:
Hepatocyte Growth Factor
(13)
Human (Homo sapiens)
(9)
1a
1gmoH01
H:38-125
1b
1gmoB01
B:37-125
1c
1gmoC01
C:37-125
1d
1gmoD01
D:37-125
1e
1gmoE01
E:37-125
1f
1gmoF01
F:37-125
1g
1gmoG01
G:38-125
1h
1gmoA01
A:37-125
Class
:
Mainly Beta
(13760)
Architecture
:
Beta Barrel
(4804)
Topology
:
Plasminogen Kringle 4
(42)
Homologous Superfamily
:
Plasminogen Kringle 4
(42)
Human (Homo sapiens)
(37)
2a
1gmoE02
E:126-209
2b
1gmoF02
F:126-209
2c
1gmoA02
A:126-208
2d
1gmoB02
B:126-208
2e
1gmoC02
C:126-208
2f
1gmoD02
D:126-208
2g
1gmoH02
H:126-208
2h
1gmoG02
G:126-207
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Pfam Domains
(0, 0)
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all PFAM domains
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