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1GKL
Biol. Unit 1
Info
Asym.Unit (223 KB)
Biol.Unit 1 (109 KB)
Biol.Unit 2 (110 KB)
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(1)
Title
:
S954A MUTANT OF THE FERULOYL ESTERASE MODULE FROM CLOSTRIDIUM THERMOCELLUM COMPLEXED WITH FERULIC ACID
Authors
:
J. A. M. Prates, N. Tarbouriech, S. J. Charnock, C. M. G. A. Fontes, L. M. A. Ferreira, G. J. Davies
Date
:
15 Aug 01 (Deposition) - 13 Dec 01 (Release) - 07 Sep 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.40
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
Hydrolase, Esterase Family 1, Inactive Mutant
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
J. A. M. Prates, N. Tarbouriech, S. J. Charnock, C. M. G. A. Fontes, L. M. A. Ferreira, G. J. Davies
The Structure Of The Feruloyl Esterase Module Of Xylanase 10B From Clostridium Thermocellum Provides Insights Into Substrate Recognition
Structure V. 9 1183 2001
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Hetero Components
(3, 4)
Info
All Hetero Components
1a: ACETATE ION (ACTa)
1b: ACETATE ION (ACTb)
2a: CADMIUM ION (CDa)
2b: CADMIUM ION (CDb)
2c: CADMIUM ION (CDc)
2d: CADMIUM ION (CDd)
2e: CADMIUM ION (CDe)
2f: CADMIUM ION (CDf)
2g: CADMIUM ION (CDg)
2h: CADMIUM ION (CDh)
2i: CADMIUM ION (CDi)
2j: CADMIUM ION (CDj)
2k: CADMIUM ION (CDk)
2l: CADMIUM ION (CDl)
3a: 3-(4-HYDROXY-3-METHOXYPHENYL)-2-PR... (FERa)
3b: 3-(4-HYDROXY-3-METHOXYPHENYL)-2-PR... (FERb)
4a: GLYCEROL (GOLa)
4b: GLYCEROL (GOLb)
4c: GLYCEROL (GOLc)
4d: GLYCEROL (GOLd)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
ACT
1
Ligand/Ion
ACETATE ION
2
CD
-1
Ligand/Ion
CADMIUM ION
3
FER
1
Ligand/Ion
3-(4-HYDROXY-3-METHOXYPHENYL)-2-PROPENOICACID
4
GOL
2
Ligand/Ion
GLYCEROL
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Sites
(13, 13)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC9 (SOFTWARE)
09: BC4 (SOFTWARE)
10: BC6 (SOFTWARE)
11: BC7 (SOFTWARE)
12: BC8 (SOFTWARE)
13: CC1 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
CYS A:823 , HIS A:886 , MET A:889 , HOH A:2158 , GLU B:1017
BINDING SITE FOR RESIDUE CD A3090
02
AC2
SOFTWARE
GLU A:894 , HIS A:1076 , GLU A:1079 , HIS A:1083 , HIS A:1085
BINDING SITE FOR RESIDUE CD A3091
03
AC3
SOFTWARE
GLU A:1007 , HOH A:2259 , HIS B:1082 , HIS B:1084 , HOH B:2356
BINDING SITE FOR RESIDUE CD A3092
04
AC4
SOFTWARE
HIS A:947 , HIS A:1080 , HOH A:2215 , HOH A:2219 , HOH A:2326 , HOH A:2337
BINDING SITE FOR RESIDUE CD A3093
05
AC5
SOFTWARE
HIS A:1081 , HOH A:2341 , HOH A:2346 , CD A:3095
BINDING SITE FOR RESIDUE CD A3094
06
AC6
SOFTWARE
HIS A:1081 , HOH A:2370 , ACT A:3089 , CD A:3094
BINDING SITE FOR RESIDUE CD A3095
07
AC7
SOFTWARE
GLU A:1017 , CYS B:823 , HIS B:886 , MET B:889 , HOH B:2155
BINDING SITE FOR RESIDUE CD B3090
08
AC9
SOFTWARE
HIS A:1082 , HIS A:1084 , HOH A:2344 , HOH A:2357 , GLU B:1007
BINDING SITE FOR RESIDUE CD B3092
09
BC4
SOFTWARE
ALA A:954 , LEU A:958 , GLY A:979 , ASP A:980 , TRP A:982 , ALA A:1020 , HOH A:2364 , HOH A:2365 , GOL A:3087
BINDING SITE FOR RESIDUE FER A3086
10
BC6
SOFTWARE
GLY A:865 , GLY A:866 , GLU A:868 , PHE A:953 , ALA A:954 , HIS A:1058 , HOH A:2364 , HOH A:2366 , FER A:3086
BINDING SITE FOR RESIDUE GOL A3087
11
BC7
SOFTWARE
LYS A:856 , TYR A:857 , ASN A:858 , GLU A:894 , PRO A:895 , TYR A:932 , HIS A:1081 , HOH A:2367
BINDING SITE FOR RESIDUE GOL A3088
12
BC8
SOFTWARE
LYS A:856 , TYR A:857 , HIS A:1081 , HOH A:2368 , HOH A:2369 , CD A:3095
BINDING SITE FOR RESIDUE ACT A3089
13
CC1
SOFTWARE
SER A:927 , LYS A:928 , GLU B:926 , SER B:927 , LYS B:928 , TYR B:929 , SER B:930 , HOH B:2200 , HOH B:2201 , HOH B:2203 , HOH B:2208 , HOH B:2379
BINDING SITE FOR RESIDUE GOL B3088
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
(, 0)
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Exons
(0, 0)
Info
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d1gkla_ (A:)
1b: SCOP_d1gklb_ (B:)
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)
Superfamilies
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(
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Families
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)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
alpha/beta-Hydrolases
(971)
Superfamily
:
alpha/beta-Hydrolases
(971)
Family
:
Carboxylesterase
(24)
Protein domain
:
Feruloyl esterase domain of the cellulosomal xylanase y
(5)
Clostridium thermocellum [TaxId: 1515]
(5)
1a
d1gkla_
A:
1b
d1gklb_
B:
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CATH Domains
(1, 2)
Info
all CATH domains
1a: CATH_1gklA00 (A:803-1085)
1b: CATH_1gklB00 (B:803-1085)
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Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Rossmann fold
(7312)
Homologous Superfamily
:
[code=3.40.50.1820, no name defined]
(692)
Clostridium thermocellum. Organism_taxid: 1515. Strain: ys.
(2)
1a
1gklA00
A:803-1085
1b
1gklB00
B:803-1085
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Pfam Domains
(0, 0)
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Chain A
Asymmetric Unit 1
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select residue range 5 to 10 in all chains
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select residue range 5 to 10 in chain 'A'
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Show PDB file:
Asym.Unit (223 KB)
Header - Asym.Unit
Biol.Unit 1 (109 KB)
Header - Biol.Unit 1
Biol.Unit 2 (110 KB)
Header - Biol.Unit 2
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