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1GJV
Asym. Unit
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Asym.Unit (60 KB)
Biol.Unit 1 (55 KB)
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(1)
Title
:
BRANCHED-CHAIN ALPHA-KETOACID DEHYDROGENASE KINASE (BCK) COMPLXED WITH ATP-GAMMA-S
Authors
:
M. Machius, J. L. Chuang, M. R. Wynn, D. R. Tomchick, D. T. Chuang
Date
:
03 Aug 01 (Deposition) - 11 Oct 01 (Release) - 30 Jan 13 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.70
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Mitochondrial Protein Kinase, Potassium, Transferase
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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Reference
:
M. Machius, J. L. Chuang, M. R. Wynn, D. R. Tomchick, D. T. Chuang
Structure Of Rat Bckd Kinase: Nucleotide-Induced Domain Communication In A Mitochondrial Protein Kinase.
Proc. Natl. Acad. Sci. Usa V. 98 11218 2001
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Hetero Components
(4, 8)
Info
All Hetero Components
1a: PHOSPHOTHIOPHOSPHORIC ACID-ADENYLA... (AGSa)
2a: CHLORIDE ION (CLa)
2b: CHLORIDE ION (CLb)
2c: CHLORIDE ION (CLc)
2d: CHLORIDE ION (CLd)
2e: CHLORIDE ION (CLe)
3a: POTASSIUM ION (Ka)
4a: MAGNESIUM ION (MGa)
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No.
Name
Count
Type
Full Name
1
AGS
1
Ligand/Ion
PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER
2
CL
5
Ligand/Ion
CHLORIDE ION
3
K
1
Ligand/Ion
POTASSIUM ION
4
MG
1
Ligand/Ion
MAGNESIUM ION
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Sites
(5, 5)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ASN A:249 , AGS A:1383 , HOH A:2039 , HOH A:2069
BINDING SITE FOR RESIDUE MG A1379
2
AC2
SOFTWARE
VAL A:298 , ASP A:300 , PHE A:303 , GLY A:337 , PRO A:341 , AGS A:1383
BINDING SITE FOR RESIDUE K A1380
3
AC3
SOFTWARE
ARG A:71
BINDING SITE FOR RESIDUE CL A1381
4
AC4
SOFTWARE
PHE A:109
BINDING SITE FOR RESIDUE CL A1382
5
AC5
SOFTWARE
GLU A:245 , ASN A:249 , ALA A:253 , ASP A:285 , GLY A:289 , VAL A:298 , THR A:304 , THR A:305 , GLY A:335 , PHE A:336 , GLY A:337 , PHE A:338 , GLY A:339 , LEU A:340 , PRO A:341 , THR A:364 , MG A:1379 , K A:1380 , HOH A:2053 , HOH A:2069 , HOH A:2070
BINDING SITE FOR RESIDUE AGS A1383
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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PROSITE Patterns/Profiles
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Exons
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(2, 2)
Info
All SCOP Domains
1a: SCOP_d1gjva1 (A:38-185)
2a: SCOP_d1gjva2 (A:186-378)
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Protein Domains
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Organisms
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(
)
Class
:
All alpha proteins
(14657)
Fold
:
Bromodomain-like
(339)
Superfamily
:
alpha-ketoacid dehydrogenase kinase, N-terminal domain
(40)
Family
:
alpha-ketoacid dehydrogenase kinase, N-terminal domain
(20)
Protein domain
:
Branched-chain alpha-ketoacid dehydrogenase kinase (BCK)
(3)
Norway rat (Rattus norvegicus) [TaxId: 10116]
(3)
1a
d1gjva1
A:38-185
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
(364)
Superfamily
:
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
(364)
Family
:
alpha-ketoacid dehydrogenase kinase, C-terminal domain
(31)
Protein domain
:
Branched-chain alpha-ketoacid dehydrogenase kinase (BCK)
(3)
Norway rat (Rattus norvegicus) [TaxId: 10116]
(3)
2a
d1gjva2
A:186-378
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CATH Domains
(2, 2)
Info
all CATH domains
1a: CATH_1gjvA01 (A:194-377)
2a: CATH_1gjvA02 (A:38-193)
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Organisms
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)
Class
:
Alpha Beta
(26913)
Architecture
:
2-Layer Sandwich
(8480)
Topology
:
Heat Shock Protein 90
(209)
Homologous Superfamily
:
[code=3.30.565.10, no name defined]
(205)
Rat (Rattus norvegicus)
(3)
1a
1gjvA01
A:194-377
Class
:
Mainly Alpha
(13335)
Architecture
:
Up-down Bundle
(3216)
Topology
:
Butyryl-CoA Dehydrogenase, subunit A; domain 3
(76)
Homologous Superfamily
:
[code=1.20.140.20, no name defined]
(25)
Rat (Rattus norvegicus)
(3)
2a
1gjvA02
A:38-193
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Pfam Domains
(0, 0)
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Chain A
Asymmetric Unit 1
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