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1GFW
Biol. Unit 3
Info
Asym.Unit (47 KB)
Biol.Unit 1 (42 KB)
Biol.Unit 2 (161 KB)
Biol.Unit 3 (162 KB)
Biol.Unit 4 (82 KB)
Biol.Unit 5 (82 KB)
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Title
:
THE 2.8 ANGSTROM CRYSTAL STRUCTURE OF CASPASE-3 (APOPAIN OR CPP32)IN COMPLEX WITH AN ISATIN SULFONAMIDE INHIBITOR.
Authors
:
N. O. Concha, C. A. Janson
Date
:
16 Jun 00 (Deposition) - 23 Jun 00 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.80
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Biol. Unit 2: A,B (4x)
Biol. Unit 3: A,B (4x)
Biol. Unit 4: A,B (2x)
Biol. Unit 5: A,B (2x)
Keywords
:
X-Ray, Caspase Inhibitor, Caspase-3, Apopain, Istin Sulfonamide, Hydrolase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
D. Lee, S. A. Long, J. L. Adams, G. Chan, K. S. Vaidya, T. A. Francis, K. Kikly, J. D. Winkler, C. M. Sung, C. Debouck, S. Richardson, M. A. Levy, W. E. Dewolf Jr. , P. M. Keller, T. Tomaszek, M. S. Head, M. D. Ryan, R. C. Haltiwanger, P. H. Liang, C. A. Janson, P. J. Mcdevitt, K. Johanson, N. O. Concha, W. Chan, S. S. Abdel-Meguid, A. M. Badger, M. W. Lark, D. P. Nadeau, L. J. Suva, M. Gowen, M. E. Nuttall
Potent And Selective Nonpeptide Inhibitors Of Caspases 3 And 7 Inhibit Apoptosis And Maintain Cell Functionality.
J. Biol. Chem. V. 275 16007 2000
(for further references see the
PDB file header
)
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Hetero Components
(1, 4)
Info
All Hetero Components
1a: 1-METHYL-5-(2-PHENOXYMETHYL-PYRROL... (MSIa)
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Label:
No.
Name
Count
Type
Full Name
1
MSI
4
Ligand/Ion
1-METHYL-5-(2-PHENOXYMETHYL-PYRROLIDINE-1-SULFONYL)-1H-INDOLE-2,3-DIONE
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Sites
(1, 1)
Info
All Sites
1: AC1 (SOFTWARE)
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Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
LYS A:57 , SER A:58 , MET A:61 , HIS A:121 , GLY A:122 , CYS A:163 , HOH A:184 , HOH B:44 , TYR B:204 , SER B:205 , TRP B:206 , ARG B:207 , PHE B:256
BINDING SITE FOR RESIDUE MSI A 1
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SAPs(SNPs)/Variants
(1, 4)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
1: VAR_001401 (D190D, chain B, )
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dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_001401
E
190
D
CASP3_HUMAN
Polymorphism
1049210
B
D
190
D
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(3, 12)
Info
All PROSITE Patterns/Profiles
1: CASPASE_P20 (A:43-167)
2: CASPASE_HIS (A:108-122)
3: CASPASE_CYS (A:154-165)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
CASPASE_P20
PS50208
Caspase family p20 domain profile.
CASP3_HUMAN
43-167
4
A:43-167
2
CASPASE_HIS
PS01121
Caspase family histidine active site.
CASP3_HUMAN
108-122
4
A:108-122
3
CASPASE_CYS
PS01122
Caspase family cysteine active site.
CASP3_HUMAN
154-165
4
A:154-165
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Exons
(0, 0)
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d1gfw_1 (A:,B:)
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Protein Domains
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Organisms
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(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
Caspase-like
(92)
Superfamily
:
Caspase-like
(92)
Family
:
Caspase catalytic domain
(76)
Protein domain
:
Apopain (caspase-3, cpp32)
(27)
Human (Homo sapiens) [TaxId: 9606]
(27)
1a
d1gfw.1
A:,B:
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CATH Domains
(2, 2)
Info
all CATH domains
1a: CATH_1gfwB00 (B:185-277)
2a: CATH_1gfwA00 (A:29-173)
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Class
:
Alpha Beta
(26913)
Architecture
:
2-Layer Sandwich
(8480)
Topology
:
Alpha-Beta Plaits
(1688)
Homologous Superfamily
:
Caspase-like
(31)
Human (Homo sapiens)
(31)
1a
1gfwB00
B:185-277
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Rossmann fold
(7312)
Homologous Superfamily
:
[code=3.40.50.1460, no name defined]
(93)
Human (Homo sapiens)
(87)
2a
1gfwA00
A:29-173
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Pfam Domains
(0, 0)
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Asym.Unit (47 KB)
Header - Asym.Unit
Biol.Unit 1 (42 KB)
Header - Biol.Unit 1
Biol.Unit 2 (161 KB)
Header - Biol.Unit 2
Biol.Unit 3 (162 KB)
Header - Biol.Unit 3
Biol.Unit 4 (82 KB)
Header - Biol.Unit 4
Biol.Unit 5 (82 KB)
Header - Biol.Unit 5
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