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1GDF
Asym. Unit
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Asym.Unit (47 KB)
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(1)
Title
:
STRUCTURE OF RHOGDI: A C-TERMINAL BINDING DOMAIN TARGETS AN N-TERMINAL INHIBITORY PEPTIDE TO GTPASES, NMR, MINIMIZED AVERAGE STRUCTURE
Authors
:
M. K. Rosen, Y. Q. Gosser
Date
:
11 May 97 (Deposition) - 19 Nov 97 (Release) - 24 Feb 09 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A
Keywords
:
Rho-Gtpase Inhibitor, Nucleotide Exchange, Isoprene Binding
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
Y. Q. Gosser, T. K. Nomanbhoy, B. Aghazadeh, D. Manor, C. Combs, R. A. Cerione, M. K. Rosen
C-Terminal Binding Domain Of Rho Gdp-Dissociation Inhibitor Directs N-Terminal Inhibitory Peptide To Gtpases.
Nature V. 387 814 1997
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
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Sites
(0, 0)
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SAPs(SNPs)/Variants
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PROSITE Patterns/Profiles
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Exons
(5, 5)
Info
All Exons
Exon 1.2a (A:60-64)
Exon 1.3b (A:64-92)
Exon 1.4a (A:92-119)
Exon 1.5 (A:120-141)
Exon 1.6b (A:141-204)
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1: Boundary 1.1a/1.2a
2: Boundary 1.2a/1.3b
3: Boundary 1.3b/1.4a
4: Boundary 1.4a/1.5
5: Boundary 1.5/1.6b
6: Boundary 1.6b/-
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1a
ENSBTAT00000042645
1a
ENSBTAE00000313955
chr19:
52509068-52509114
47
GDIR1_BOVIN
-
0
0
-
-
1.2a
ENSBTAT00000042645
2a
ENSBTAE00000313954
chr19:
52510634-52510850
217
GDIR1_BOVIN
1-64
64
1
A:60-64
5
1.3b
ENSBTAT00000042645
3b
ENSBTAE00000415332
chr19:
52510952-52511035
84
GDIR1_BOVIN
64-92
29
1
A:64-92
29
1.4a
ENSBTAT00000042645
4a
ENSBTAE00000385033
chr19:
52511376-52511458
83
GDIR1_BOVIN
92-119
28
1
A:92-119
28
1.5
ENSBTAT00000042645
5
ENSBTAE00000384180
chr19:
52511539-52511602
64
GDIR1_BOVIN
120-141
22
1
A:120-141
22
1.6b
ENSBTAT00000042645
6b
ENSBTAE00000313946
chr19:
52511721-52513082
1362
GDIR1_BOVIN
141-206
66
1
A:141-204
64
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SCOP Domains
(1, 1)
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1a: SCOP_d1gdfa_ (A:)
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)
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Organisms
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(
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Class
:
All beta proteins
(24004)
Fold
:
Immunoglobulin-like beta-sandwich
(7299)
Superfamily
:
E set domains
(509)
Family
:
RhoGDI-like
(34)
Protein domain
:
Rho GDP-dissociation inhibitor 1, RhoGDI
(16)
Cow (Bos taurus) [TaxId: 9913]
(3)
1a
d1gdfa_
A:
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CATH Domains
(1, 1)
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all CATH domains
1a: CATH_1gdfA00 (A:60-204)
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Class
:
Mainly Beta
(13760)
Architecture
:
Distorted Sandwich
(506)
Topology
:
Coagulation Factor XIII; Chain A, domain 1
(28)
Homologous Superfamily
:
Coagulation Factor XIII, subunit A, domain 1
(22)
Cattle (Bos taurus)
(2)
1a
1gdfA00
A:60-204
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Pfam Domains
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Chain A
Asymmetric Unit 1
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