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1GD8
Biol. Unit 2
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Asym.Unit (162 KB)
Biol.Unit 1 (20 KB)
Biol.Unit 2 (19 KB)
Biol.Unit 3 (20 KB)
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Biol.Unit 5 (20 KB)
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Biol.Unit 8 (19 KB)
Biol.Unit 9 (20 KB)
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(1)
Title
:
THE CRYSTAL STRUCTURE OF BACTERIA-SPECIFIC L17 RIBOSOMAL PROTEIN.
Authors
:
D. G. Vassylyev, M. Shirouzu, T. Wada, S. Yokoyama, Riken Structural Genomics/Proteomics Initiative (Rsgi)
Date
:
22 Sep 00 (Deposition) - 22 Sep 01 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.30
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H,I
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Biol. Unit 3: C (1x)
Biol. Unit 4: D (1x)
Biol. Unit 5: E (1x)
Biol. Unit 6: F (1x)
Biol. Unit 7: G (1x)
Biol. Unit 8: H (1x)
Biol. Unit 9: I (1x)
Keywords
:
Two Domains, Ribosomal Protein S8-Like Domain, Trp Repressor-Like Domain, Helix-Turn-Helix Motif, Two Types Of Dimers, Four Dimers Of Each Type. , Riken Structural Genomics/Proteomics Initiative, Rsgi, Structural Genomics, Ribosome
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
]
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Reference
:
D. G. Vassylyev, M. Shirouzu, T. Wada, S. Yokoyama
The Crystal Structure Of The Bacteria-Specific L17 Ribosomal Protein From Thermus Thermophilus.
To Be Published
(for further references see the
PDB file header
)
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Hetero Components
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SCOP Domains
(1, 9)
Info
All SCOP Domains
1a: SCOP_d1gd8a_ (A:)
1b: SCOP_d1gd8b_ (B:)
1c: SCOP_d1gd8c_ (C:)
1d: SCOP_d1gd8d_ (D:)
1e: SCOP_d1gd8e_ (E:)
1f: SCOP_d1gd8f_ (F:)
1g: SCOP_d1gd8g_ (G:)
1h: SCOP_d1gd8h_ (H:)
1i: SCOP_d1gd8i_ (I:)
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Protein Domains
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Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Prokaryotic ribosomal protein L17
(45)
Superfamily
:
Prokaryotic ribosomal protein L17
(45)
Family
:
Prokaryotic ribosomal protein L17
(45)
Protein domain
:
Prokaryotic ribosomal protein L17
(45)
Thermus thermophilus [TaxId: 274]
(11)
1a
d1gd8a_
A:
1b
d1gd8b_
B:
1c
d1gd8c_
C:
1d
d1gd8d_
D:
1e
d1gd8e_
E:
1f
d1gd8f_
F:
1g
d1gd8g_
G:
1h
d1gd8h_
H:
1i
d1gd8i_
I:
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CATH Domains
(1, 9)
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all CATH domains
1a: CATH_1gd8A00 (A:14-118)
1b: CATH_1gd8B00 (B:14-118)
1c: CATH_1gd8C00 (C:14-118)
1d: CATH_1gd8D00 (D:14-118)
1e: CATH_1gd8E00 (E:14-118)
1f: CATH_1gd8F00 (F:14-118)
1g: CATH_1gd8G00 (G:14-118)
1h: CATH_1gd8H00 (H:14-118)
1i: CATH_1gd8I00 (I:14-118)
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Class
:
Alpha Beta
(26913)
Architecture
:
Alpha-Beta Complex
(3881)
Topology
:
50s Ribosomal Protein L17; Chain: A,
(76)
Homologous Superfamily
:
[code=3.90.1030.10, no name defined]
(76)
Thermus thermophilus. Organism_taxid: 274.
(1)
1a
1gd8A00
A:14-118
1b
1gd8B00
B:14-118
1c
1gd8C00
C:14-118
1d
1gd8D00
D:14-118
1e
1gd8E00
E:14-118
1f
1gd8F00
F:14-118
1g
1gd8G00
G:14-118
1h
1gd8H00
H:14-118
1i
1gd8I00
I:14-118
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Asym.Unit (162 KB)
Header - Asym.Unit
Biol.Unit 1 (20 KB)
Header - Biol.Unit 1
Biol.Unit 2 (19 KB)
Header - Biol.Unit 2
Biol.Unit 3 (20 KB)
Header - Biol.Unit 3
Biol.Unit 4 (20 KB)
Header - Biol.Unit 4
Biol.Unit 5 (20 KB)
Header - Biol.Unit 5
Biol.Unit 6 (19 KB)
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Biol.Unit 7 (20 KB)
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Biol.Unit 8 (19 KB)
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Biol.Unit 9 (20 KB)
Header - Biol.Unit 9
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