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1GAO
Biol. Unit 3
Info
Asym.Unit (81 KB)
Biol.Unit 1 (21 KB)
Biol.Unit 2 (21 KB)
Biol.Unit 3 (21 KB)
Biol.Unit 4 (21 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF THE L44S MUTANT OF FERREDOXIN I
Authors
:
C. D. Stout, B. K. Burgess, G. S. Prasad, V. Sridhar, Y. S. Jung
Date
:
30 Nov 00 (Deposition) - 13 Dec 00 (Release) - 31 Mar 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.20
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Biol. Unit 3: C (1x)
Biol. Unit 4: D (1x)
Keywords
:
Iron-Sulfur Clusters, Ferredoxin, Electron Transport
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
K. Chen, Y. S. Jung, C. A. Bonagura, G. J. Tilley, G. S. Prasad, V. Sridhar, F. A. Armstrong, C. D. Stout, B. K. Burgess
Azotobacter Vinelandii Ferredoxin I: A Sequence And Structure Comparison Approach To Alteration Of [4Fe-4S]2+/+ Reduction Potential.
J. Biol. Chem. V. 277 5603 2002
(for further references see the
PDB file header
)
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Hetero Components
(2, 2)
Info
All Hetero Components
1a: FE3-S4 CLUSTER (F3Sa)
1b: FE3-S4 CLUSTER (F3Sb)
1c: FE3-S4 CLUSTER (F3Sc)
1d: FE3-S4 CLUSTER (F3Sd)
2a: IRON/SULFUR CLUSTER (SF4a)
2b: IRON/SULFUR CLUSTER (SF4b)
2c: IRON/SULFUR CLUSTER (SF4c)
2d: IRON/SULFUR CLUSTER (SF4d)
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No.
Name
Count
Type
Full Name
1
F3S
1
Ligand/Ion
FE3-S4 CLUSTER
2
SF4
1
Ligand/Ion
IRON/SULFUR CLUSTER
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Sites
(2, 2)
Info
All Sites
1: AC5 (SOFTWARE)
2: AC6 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC5
SOFTWARE
PHE C:402 , CYS C:420 , CYS C:424 , ILE C:434 , CYS C:439 , ILE C:440 , CYS C:442 , ALA C:443 , CYS C:445
BINDING SITE FOR RESIDUE SF4 C 507
2
AC6
SOFTWARE
CYS C:408 , LYS C:412 , TYR C:413 , THR C:414 , ASP C:415 , CYS C:416 , CYS C:449 , PRO C:450 , ALA C:451 , ILE C:454
BINDING SITE FOR RESIDUE F3S C 508
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
(2, 2)
Info
All PROSITE Patterns/Profiles
1: 4FE4S_FER_2 (C:430-459)
2: 4FE4S_FER_1 (C:439-450)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
4FE4S_FER_2
PS51379
4Fe-4S ferredoxin-type iron-sulfur binding domain profile.
FER1_AZOVI
31-60
1-30
1
-
-
C:430-459
-
-
2
4FE4S_FER_1
PS00198
4Fe-4S ferredoxin-type iron-sulfur binding region signature.
FER1_AZOVI
40-51
1
-
-
C:439-450
-
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Exons
(0, 0)
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SCOP Domains
(1, 4)
Info
All SCOP Domains
1a: SCOP_d1gaoa_ (A:)
1b: SCOP_d1gaob_ (B:)
1c: SCOP_d1gaoc_ (C:)
1d: SCOP_d1gaod_ (D:)
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Organisms
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)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Ferredoxin-like
(1795)
Superfamily
:
4Fe-4S ferredoxins
(143)
Family
:
7-Fe ferredoxin
(40)
Protein domain
:
Ferredoxin
(37)
Azotobacter vinelandii [TaxId: 354]
(32)
1a
d1gaoa_
A:
1b
d1gaob_
B:
1c
d1gaoc_
C:
1d
d1gaod_
D:
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CATH Domains
(1, 4)
Info
all CATH domains
1a: CATH_1gaoA00 (A:1-106)
1b: CATH_1gaoB00 (B:201-306)
1c: CATH_1gaoC00 (C:401-506)
1d: CATH_1gaoD00 (D:601-706)
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Class
:
Alpha Beta
(26913)
Architecture
:
2-Layer Sandwich
(8480)
Topology
:
Alpha-Beta Plaits
(1688)
Homologous Superfamily
:
[code=3.30.70.20, no name defined]
(120)
Azotobacter vinelandii. Organism_taxid: 354
(14)
1a
1gaoA00
A:1-106
1b
1gaoB00
B:201-306
1c
1gaoC00
C:401-506
1d
1gaoD00
D:601-706
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Pfam Domains
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Chain C
Asymmetric Unit 1
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Show PDB file:
Asym.Unit (81 KB)
Header - Asym.Unit
Biol.Unit 1 (21 KB)
Header - Biol.Unit 1
Biol.Unit 2 (21 KB)
Header - Biol.Unit 2
Biol.Unit 3 (21 KB)
Header - Biol.Unit 3
Biol.Unit 4 (21 KB)
Header - Biol.Unit 4
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