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1GA3
Asym. Unit
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Asym.Unit (596 KB)
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Models
(20 )
Title
:
NMR STRUCTURE OF INTERLEUKIN-13
Authors
:
E. Z. Eisenmesser, D. A. Horita, A. S. Altieri, R. A. Byrd
Date
:
29 Nov 00 (Deposition) - 04 Jul 01 (Release) - 24 Feb 09 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A (20 x)
Keywords
:
Interleukin-13, Il-13, Il13, Cytokine
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
E. Z. Eisenmesser, D. A. Horita, A. S. Altieri, R. A. Byrd
Solution Structure Of Interleukin-13 And Insights Into Receptor Engagement
J. Mol. Biol. V. 310 231 2001
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
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Sites
(0, 0)
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SAPs(SNPs)/Variants
(1, 1)
Info
(mutated residues are not available in "Model" view)
All SNPs/Variants
1: VAR_010037 (R111Q, chain A, )
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dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_010037
R
144
Q
IL13_HUMAN
Polymorphism
20541
A
R
111
Q
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: INTERLEUKIN_4_13 (A:10-37)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
INTERLEUKIN_4_13
PS00838
Interleukins -4 and -13 signature.
IL13_HUMAN
43-70
1
A:10-37
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Exons
(4, 4)
Info
All Exons
Exon 1.3a (A:1-25 (gaps))
Exon 1.3d (A:26-43)
Exon 1.4 (A:44-78)
Exon 1.5e (A:79-113)
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All Exon Boundaries
1: Boundary -/1.3a
2: Boundary 1.3a/1.3d
3: Boundary 1.3d/1.4
4: Boundary 1.4/1.5e
5: Boundary 1.5e/-
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.3a
ENST00000304506
3a
ENSE00001124039
chr5:
131993865-131994052
188
IL13_HUMAN
1-58
58
1
A:1-25 (gaps)
29
1.3d
ENST00000304506
3d
ENSE00001170203
chr5:
131995110-131995163
54
IL13_HUMAN
59-76
18
1
A:26-43
18
1.4
ENST00000304506
4
ENSE00001170195
chr5:
131995416-131995520
105
IL13_HUMAN
77-111
35
1
A:44-78
35
1.5e
ENST00000304506
5e
ENSE00001124031
chr5:
131995867-131996802
936
IL13_HUMAN
112-146
35
1
A:79-113
35
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d1ga3a_ (A:)
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Protein Domains
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)
(
)
Organisms
(
)
(
)
Class
:
All alpha proteins
(14657)
Fold
:
4-helical cytokines
(168)
Superfamily
:
4-helical cytokines
(168)
Family
:
Short-chain cytokines
(78)
Protein domain
:
Interleukin-13 (IL-13)
(9)
Human (Homo sapiens) [TaxId: 9606]
(9)
1a
d1ga3a_
A:
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CATH Domains
(1, 1)
Info
all CATH domains
1a: CATH_1ga3A00 (A:1-113)
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Class
:
Mainly Alpha
(13335)
Architecture
:
Up-down Bundle
(3216)
Topology
:
Growth Hormone; Chain: A;
(136)
Homologous Superfamily
:
[code=1.20.1250.10, no name defined]
(130)
Human (Homo sapiens)
(110)
1a
1ga3A00
A:1-113
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Pfam Domains
(0, 0)
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Chain A
Asymmetric Unit 1
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