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1G8F
Biol. Unit 1
Info
Asym.Unit (104 KB)
Biol.Unit 1 (566 KB)
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(1)
Title
:
ATP SULFURYLASE FROM S. CEREVISIAE
Authors
:
T. C. Ullrich, M. Blaesse, R. Huber
Date
:
17 Nov 00 (Deposition) - 23 May 01 (Release) - 16 Nov 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.95
Chains
:
Asym. Unit : A
Biol. Unit 1: A (6x)
Keywords
:
Alpha-Beta Protein, Beta-Barrel, Rossmann-Fold, Kinase Fold, Transferase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
T. C. Ullrich, M. Blaesse, R. Huber
Crystal Structure Of Atp Sulfurylase From Saccharomyces Cerevisiae, A Key Enzyme In Sulfate Activation.
Embo J. V. 20 316 2001
[
close entry info
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Hetero Components
(3, 84)
Info
All Hetero Components
1a: ACETIC ACID (ACYa)
1b: ACETIC ACID (ACYb)
1c: ACETIC ACID (ACYc)
1d: ACETIC ACID (ACYd)
1e: ACETIC ACID (ACYe)
1f: ACETIC ACID (ACYf)
1g: ACETIC ACID (ACYg)
1h: ACETIC ACID (ACYh)
1i: ACETIC ACID (ACYi)
1j: ACETIC ACID (ACYj)
1k: ACETIC ACID (ACYk)
2a: CALCIUM ION (CAa)
2b: CALCIUM ION (CAb)
2c: CALCIUM ION (CAc)
3a: CADMIUM ION (CDa)
3b: CADMIUM ION (CDb)
3c: CADMIUM ION (CDc)
3d: CADMIUM ION (CDd)
3e: CADMIUM ION (CDe)
4a: MAGNESIUM ION (MGa)
5a: SODIUM ION (NAa)
5b: SODIUM ION (NAb)
6a: SULFATE ION (SO4a)
6b: SULFATE ION (SO4b)
7a: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,... (TRSa)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
ACY
66
Ligand/Ion
ACETIC ACID
2
CA
-1
Ligand/Ion
CALCIUM ION
3
CD
-1
Ligand/Ion
CADMIUM ION
4
MG
-1
Ligand/Ion
MAGNESIUM ION
5
NA
-1
Ligand/Ion
SODIUM ION
6
SO4
12
Ligand/Ion
SULFATE ION
7
TRS
6
Ligand/Ion
2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
[
close Hetero Component info
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Sites
(25, 25)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
21: CC3 (SOFTWARE)
22: CC4 (SOFTWARE)
23: CC5 (SOFTWARE)
24: CC6 (SOFTWARE)
25: CC7 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ASP A:168 , HIS A:235 , HIS A:236 , SO4 A:525 , ACY A:535
BINDING SITE FOR RESIDUE CD A 512
02
AC2
SOFTWARE
PRO A:39 , CYS A:43 , HOH A:895 , HOH A:1021 , HOH A:1094 , HOH A:1102
BINDING SITE FOR RESIDUE CD A 513
03
AC3
SOFTWARE
LEU A:18 , GLU A:22 , HIS A:319 , ACY A:526 , HOH A:1033
BINDING SITE FOR RESIDUE CD A 514
04
AC4
SOFTWARE
GLU A:182 , ACY A:533
BINDING SITE FOR RESIDUE CD A 515
05
AC5
SOFTWARE
ASP A:189 , HIS A:494 , ACY A:527 , ACY A:534
BINDING SITE FOR RESIDUE CD A 516
06
AC6
SOFTWARE
ASP A:151
BINDING SITE FOR RESIDUE CA A 517
07
AC7
SOFTWARE
GLU A:409
BINDING SITE FOR RESIDUE NA A 518
08
AC8
SOFTWARE
ASP A:303 , ACY A:536
BINDING SITE FOR RESIDUE CA A 519
09
AC9
SOFTWARE
ASP A:489
BINDING SITE FOR RESIDUE CA A 520
10
BC1
SOFTWARE
GLU A:46 , PRO A:164 , HIS A:166 , HOH A:604 , HOH A:1101
BINDING SITE FOR RESIDUE MG A 521
11
BC2
SOFTWARE
ASP A:309
BINDING SITE FOR RESIDUE NA A 522
12
BC3
SOFTWARE
GLN A:195 , ARG A:197 , ALA A:293 , HOH A:779 , HOH A:809 , HOH A:990
BINDING SITE FOR RESIDUE SO4 A 523
13
BC4
SOFTWARE
HIS A:166 , ASP A:168 , ARG A:173 , HIS A:235 , SER A:417 , CD A:512 , ACY A:535 , HOH A:553 , HOH A:733
BINDING SITE FOR RESIDUE SO4 A 525
14
BC5
SOFTWARE
PRO A:2 , ASP A:189 , GLY A:282 , HOH A:617 , HOH A:874
BINDING SITE FOR RESIDUE TRS A 524
15
BC6
SOFTWARE
ALA A:17 , LEU A:18 , LYS A:20 , ASN A:21 , GLU A:22 , HIS A:319 , CD A:514 , HOH A:812
BINDING SITE FOR RESIDUE ACY A 526
16
BC7
SOFTWARE
GLN A:187 , ASP A:189 , SER A:493 , HIS A:494 , CD A:516 , ACY A:534 , HOH A:692
BINDING SITE FOR RESIDUE ACY A 527
17
BC8
SOFTWARE
ASN A:216 , GLU A:486 , GLU A:490 , PRO A:491 , HIS A:494 , LYS A:498
BINDING SITE FOR RESIDUE ACY A 528
18
BC9
SOFTWARE
LYS A:174 , GLN A:178 , LEU A:181 , GLU A:182 , SER A:185
BINDING SITE FOR RESIDUE ACY A 529
19
CC1
SOFTWARE
GLU A:130 , ARG A:134
BINDING SITE FOR RESIDUE ACY A 530
20
CC2
SOFTWARE
PRO A:55 , LEU A:56 , THR A:57 , GLY A:58 , ASP A:64 , HOH A:719
BINDING SITE FOR RESIDUE ACY A 531
21
CC3
SOFTWARE
ASP A:71
BINDING SITE FOR RESIDUE ACY A 532
22
CC4
SOFTWARE
GLY A:171 , LYS A:174 , GLU A:182 , ARG A:186 , PHE A:255 , CD A:515 , HOH A:561
BINDING SITE FOR RESIDUE ACY A 533
23
CC5
SOFTWARE
ASP A:189 , HIS A:494 , CD A:516 , ACY A:527 , HOH A:671
BINDING SITE FOR RESIDUE ACY A 534
24
CC6
SOFTWARE
ASP A:168 , HIS A:235 , HIS A:236 , SER A:417 , CD A:512 , SO4 A:525
BINDING SITE FOR RESIDUE ACY A 535
25
CC7
SOFTWARE
LYS A:297 , GLY A:301 , VAL A:302 , ASP A:303 , CA A:519
BINDING SITE FOR RESIDUE ACY A 536
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
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Sorry, no Info available
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PROSITE Patterns/Profiles
(, 0)
Info
All PROSITE Patterns/Profiles
;
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End label:
Sorry, no Info available
[
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Exons
(0, 0)
Info
All Exons
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All Exon Boundaries
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(3, 3)
Info
All SCOP Domains
1a: SCOP_d1g8fa1 (A:2-168)
2a: SCOP_d1g8fa2 (A:169-389)
3a: SCOP_d1g8fa3 (A:390-511)
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(
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Families
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)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All beta proteins
(24004)
Fold
:
PUA domain-like
(96)
Superfamily
:
PUA domain-like
(96)
Family
:
ATP sulfurylase N-terminal domain
(15)
Protein domain
:
ATP sulfurylase N-terminal domain
(15)
Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
(8)
1a
d1g8fa1
A:2-168
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
Adenine nucleotide alpha hydrolase-like
(440)
Superfamily
:
Nucleotidylyl transferase
(325)
Family
:
ATP sulfurylase catalytic domain
(16)
Protein domain
:
ATP sulfurylase catalytic domain
(15)
Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
(8)
2a
d1g8fa2
A:169-389
Fold
:
P-loop containing nucleoside triphosphate hydrolases
(2083)
Superfamily
:
P-loop containing nucleoside triphosphate hydrolases
(2083)
Family
:
ATP sulfurylase C-terminal domain
(9)
Protein domain
:
ATP sulfurylase C-terminal domain
(9)
Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
(7)
3a
d1g8fa3
A:390-511
[
close SCOP info
]
CATH Domains
(3, 3)
Info
all CATH domains
1a: CATH_1g8fA03 (A:390-511)
2a: CATH_1g8fA01 (A:190-389)
3a: CATH_1g8fA02 (A:2-189)
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Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Rossmann fold
(7312)
Homologous Superfamily
:
P-loop containing nucleotide triphosphate hydrolases
(1378)
Baker's yeast (Saccharomyces cerevisiae)
(61)
1a
1g8fA03
A:390-511
Homologous Superfamily
:
Tyrosyl-Transfer RNA Synthetase , subunit E, domain 1
(328)
Baker's yeast (Saccharomyces cerevisiae)
(11)
2a
1g8fA01
A:190-389
Architecture
:
Roll
(3276)
Topology
:
Sulfate adenylyltransferase
(12)
Homologous Superfamily
:
Sulfate adenylyltransferase
(12)
Baker's yeast (Saccharomyces cerevisiae)
(8)
3a
1g8fA02
A:2-189
[
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Pfam Domains
(0, 0)
Info
all PFAM domains
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Sorry, no Info available
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Atom Selection
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Nucleic
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Sidechain
Hetero
Ligand
Solvent
All Atoms
Protein & NOT Variant
Protein & NOT Site
Protein & NOT PROSITE
Chain A
Asymmetric Unit 1
Asymmetric Unit 2
Asymmetric Unit 3
Asymmetric Unit 4
Asymmetric Unit 5
Asymmetric Unit 6
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