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1FYJ
Asym. Unit
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Asym.Unit (344 KB)
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Models
(20 )
Title
:
SOLUTION STRUCTURE OF MULTI-FUNCTIONAL PEPTIDE MOTIF-1 PRESENT IN HUMAN GLUTAMYL-PROLYL TRNA SYNTHETASE (EPRS).
Authors
:
E. -J. Jeong, G. -S. Hwang, K. H. Kim, M. J. Kim, S. Kim, K. -S. Kim
Date
:
02 Oct 00 (Deposition) - 14 Mar 01 (Release) - 24 Feb 09 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A (20 x)
Keywords
:
Helix-Turn-Helix, Ligase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
E. J. Jeong, G. S. Hwang, K. H. Kim, M. J. Kim, S. Kim, K. S. Kim
Structural Analysis Of Multifunctional Peptide Motifs In Human Bifunctional Trna Synthetase: Identification Of Rna-Binding Residues And Functional Implications For Tandem Repeats.
Biochemistry V. 39 15775 2000
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
Info
All Hetero Components
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Sorry, no Info available
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Sites
(0, 0)
Info
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available in "Model" view)
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PROSITE Patterns/Profiles
(2, 2)
Info
All PROSITE Patterns/Profiles
1: WHEP_TRS_2 (A:1-57|-|-)
2: WHEP_TRS_1 (A:12-40|-|-)
;
View:
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
WHEP_TRS_2
PS51185
WHEP-TRS domain profile.
SYEP_HUMAN
749-805
822-878
900-956
1
A:1-57
-
-
2
WHEP_TRS_1
PS00762
WHEP-TRS domain signature.
SYEP_HUMAN
760-788
833-861
911-939
1
A:12-40
-
-
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Exons
(1, 1)
Info
All Exons
Exon 1.19b (A:1-57)
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All Exon Boundaries
1: Boundary 1.18/1.19b
2: Boundary 1.19b/1.20
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1a
ENST00000366923
1a
ENSE00001443000
chr1:
220220000-220219685
316
SYEP_HUMAN
1-16
16
0
-
-
1.2
ENST00000366923
2
ENSE00001127556
chr1:
220213611-220213527
85
SYEP_HUMAN
16-44
29
0
-
-
1.3
ENST00000366923
3
ENSE00001068863
chr1:
220208355-220208256
100
SYEP_HUMAN
44-77
34
0
-
-
1.4b
ENST00000366923
4b
ENSE00001129041
chr1:
220207000-220206844
157
SYEP_HUMAN
78-130
53
0
-
-
1.5a
ENST00000366923
5a
ENSE00001127104
chr1:
220205868-220205729
140
SYEP_HUMAN
130-176
47
0
-
-
1.6
ENST00000366923
6
ENSE00001127099
chr1:
220203822-220203728
95
SYEP_HUMAN
177-208
32
0
-
-
1.7a
ENST00000366923
7a
ENSE00001127090
chr1:
220198600-220198474
127
SYEP_HUMAN
208-250
43
0
-
-
1.9
ENST00000366923
9
ENSE00000925599
chr1:
220197798-220197606
193
SYEP_HUMAN
251-315
65
0
-
-
1.10
ENST00000366923
10
ENSE00000925598
chr1:
220195860-220195689
172
SYEP_HUMAN
315-372
58
0
-
-
1.11
ENST00000366923
11
ENSE00000925597
chr1:
220193563-220193330
234
SYEP_HUMAN
372-450
79
0
-
-
1.12
ENST00000366923
12
ENSE00000925596
chr1:
220192421-220192337
85
SYEP_HUMAN
450-478
29
0
-
-
1.13
ENST00000366923
13
ENSE00000925595
chr1:
220191850-220191791
60
SYEP_HUMAN
479-498
20
0
-
-
1.14
ENST00000366923
14
ENSE00000925594
chr1:
220184398-220184288
111
SYEP_HUMAN
499-535
37
0
-
-
1.15b
ENST00000366923
15b
ENSE00001127050
chr1:
220180680-220180544
137
SYEP_HUMAN
536-581
46
0
-
-
1.16
ENST00000366923
16
ENSE00001127045
chr1:
220179655-220179448
208
SYEP_HUMAN
581-650
70
0
-
-
1.17
ENST00000366923
17
ENSE00001127038
chr1:
220178702-220178590
113
SYEP_HUMAN
651-688
38
0
-
-
1.18
ENST00000366923
18
ENSE00001127034
chr1:
220174597-220174480
118
SYEP_HUMAN
688-727
40
0
-
-
1.19b
ENST00000366923
19b
ENSE00000925589
chr1:
220170684-220170325
360
SYEP_HUMAN
728-847
120
1
A:1-57
57
1.20
ENST00000366923
20
ENSE00000925588
chr1:
220162165-220161932
234
SYEP_HUMAN
848-925
78
0
-
-
1.21
ENST00000366923
21
ENSE00002175163
chr1:
220160746-220160484
263
SYEP_HUMAN
926-1013
88
0
-
-
1.22b
ENST00000366923
22b
ENSE00001730008
chr1:
220157599-220157548
52
SYEP_HUMAN
1013-1030
18
0
-
-
1.23
ENST00000366923
23
ENSE00001791317
chr1:
220156740-220156531
210
SYEP_HUMAN
1031-1100
70
0
-
-
1.24a
ENST00000366923
24a
ENSE00001801224
chr1:
220156186-220156114
73
SYEP_HUMAN
1101-1125
25
0
-
-
1.25
ENST00000366923
25
ENSE00001757159
chr1:
220154799-220154720
80
SYEP_HUMAN
1125-1151
27
0
-
-
1.26
ENST00000366923
26
ENSE00001622751
chr1:
220154199-220154098
102
SYEP_HUMAN
1152-1185
34
0
-
-
1.27
ENST00000366923
27
ENSE00001774612
chr1:
220153582-220153427
156
SYEP_HUMAN
1186-1237
52
0
-
-
1.28
ENST00000366923
28
ENSE00001710118
chr1:
220152957-220152760
198
SYEP_HUMAN
1238-1303
66
0
-
-
1.29
ENST00000366923
29
ENSE00001617755
chr1:
220152061-220151888
174
SYEP_HUMAN
1304-1361
58
0
-
-
1.30
ENST00000366923
30
ENSE00001661118
chr1:
220146740-220146580
161
SYEP_HUMAN
1362-1415
54
0
-
-
1.31
ENST00000366923
31
ENSE00001745189
chr1:
220145489-220145411
79
SYEP_HUMAN
1415-1441
27
0
-
-
1.32b
ENST00000366923
32b
ENSE00001599829
chr1:
220142464-220142400
65
SYEP_HUMAN
1442-1463
22
0
-
-
1.33c
ENST00000366923
33c
ENSE00001710859
chr1:
220142298-220141943
356
SYEP_HUMAN
1463-1512
50
0
-
-
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d1fyja_ (A:)
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Protein Domains
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)
(
)
Organisms
(
)
(
)
Class
:
All alpha proteins
(14657)
Fold
:
S15/NS1 RNA-binding domain
(66)
Superfamily
:
S15/NS1 RNA-binding domain
(66)
Family
:
a tRNA synthase domain
(4)
Protein domain
:
Multifunctional Glu-Pro-tRNA synthase (EPRS) second repeated element
(3)
Human (Homo sapiens) [TaxId: 9606]
(1)
1a
d1fyja_
A:
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CATH Domains
(1, 1)
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all CATH domains
1a: CATH_1fyjA00 (A:1-57)
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Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
Helix Hairpins
(718)
Homologous Superfamily
:
[code=1.10.287.10, no name defined]
(116)
Human (Homo sapiens)
(2)
1a
1fyjA00
A:1-57
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Pfam Domains
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Chain A
Asymmetric Unit 1
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