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1FS7
Biol. Unit 1
Info
Asym.Unit (103 KB)
Biol.Unit 1 (188 KB)
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(1)
Title
:
CYTOCHROME C NITRITE REDUCTASE FROM WOLINELLA SUCCINOGENES
Authors
:
O. Einsle, P. Stach, A. Messerschmidt, J. Simon, A. Kroeger, R. Huber, P. M. H. Kroneck
Date
:
08 Sep 00 (Deposition) - 17 Jan 01 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.60
Chains
:
Asym. Unit : A
Biol. Unit 1: A (2x)
Keywords
:
C-Type Cytochrome, Oxidoreductase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
O. Einsle, P. Stach, A. Messerschmidt, J. Simon, A. Kroger, R. Huber, P. M. Kroneck
Cytochrome C Nitrite Reductase From Wolinella Succinogenes. Structure At 1. 6 A Resolution, Inhibitor Binding, And Heme-Packing Motifs.
J. Biol. Chem. V. 275 39608 2000
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Hetero Components
(2, 16)
Info
All Hetero Components
1a: ACETATE ION (ACTa)
1b: ACETATE ION (ACTb)
1c: ACETATE ION (ACTc)
2a: CALCIUM ION (CAa)
3a: PROTOPORPHYRIN IX CONTAINING FE (HEMa)
3b: PROTOPORPHYRIN IX CONTAINING FE (HEMb)
3c: PROTOPORPHYRIN IX CONTAINING FE (HEMc)
3d: PROTOPORPHYRIN IX CONTAINING FE (HEMd)
3e: PROTOPORPHYRIN IX CONTAINING FE (HEMe)
4a: YTTRIUM ION (Y1a)
4b: YTTRIUM ION (Y1b)
4c: YTTRIUM ION (Y1c)
View:
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Label:
No.
Name
Count
Type
Full Name
1
ACT
6
Ligand/Ion
ACETATE ION
2
CA
-1
Ligand/Ion
CALCIUM ION
3
HEM
10
Ligand/Ion
PROTOPORPHYRIN IX CONTAINING FE
4
Y1
-1
Ligand/Ion
YTTRIUM ION
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Sites
(12, 12)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
View:
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
GLU A:217 , TYR A:218 , LYS A:274 , GLN A:276 , HOH A:744 , HOH A:864
BINDING SITE FOR RESIDUE CA A 651
02
AC2
SOFTWARE
GLU A:52 , ASP A:444 , HOH A:814 , HOH A:946 , HOH A:947 , HOH A:948 , HOH A:951
BINDING SITE FOR RESIDUE Y1 A 652
03
AC3
SOFTWARE
PRO A:99 , HEM A:510 , HEM A:511 , ACT A:656 , HOH A:821 , HOH A:875 , HOH A:954
BINDING SITE FOR RESIDUE Y1 A 653
04
AC4
SOFTWARE
GLU A:408 , HEM A:512 , ACT A:657
BINDING SITE FOR RESIDUE Y1 A 654
05
AC5
SOFTWARE
GLY A:43 , GLU A:45 , TYR A:56 , HOH A:814 , HOH A:946 , HOH A:951 , HOH A:987
BINDING SITE FOR RESIDUE ACT A 655
06
AC6
SOFTWARE
HEM A:511 , Y1 A:653 , HOH A:821 , HOH A:954 , HOH A:1154
BINDING SITE FOR RESIDUE ACT A 656
07
AC7
SOFTWARE
ILE A:287 , PRO A:407 , GLU A:408 , HEM A:512 , Y1 A:654 , HOH A:962
BINDING SITE FOR RESIDUE ACT A 657
08
AC8
SOFTWARE
TYR A:96 , ASN A:97 , PRO A:99 , ASP A:108 , ASN A:109 , THR A:112 , ARG A:114 , THR A:115 , LEU A:126 , CYS A:130 , CYS A:133 , LYS A:134 , CYS A:214 , HIS A:215 , TYR A:218 , HIS A:277 , ALA A:398 , HIS A:400 , HEM A:510 , HOH A:658 , HOH A:690 , HOH A:693 , HOH A:712 , HOH A:714 , HOH A:718 , HOH A:761
BINDING SITE FOR RESIDUE HEM A 508
09
AC9
SOFTWARE
TYR A:57 , GLN A:60 , TRP A:64 , GLY A:167 , CYS A:168 , CYS A:171 , HIS A:172 , LEU A:179 , HIS A:203 , ARG A:207 , MET A:300 , TYR A:302 , TYR A:310 , SER A:311 , HIS A:313 , HEM A:510 , HOH A:983
BINDING SITE FOR RESIDUE HEM A 509
10
BC1
SOFTWARE
SER A:70 , PRO A:99 , ARG A:100 , GLY A:101 , HIS A:102 , TYR A:104 , ALA A:105 , ASP A:108 , CYS A:133 , LYS A:134 , ILE A:166 , VAL A:210 , CYS A:211 , CYS A:214 , HIS A:215 , HIS A:299 , VAL A:315 , HEM A:508 , HEM A:509 , HEM A:511 , Y1 A:653 , HOH A:688 , HOH A:689 , HOH A:821 , HOH A:875 , HOH A:1145
BINDING SITE FOR RESIDUE HEM A 510
11
BC2
SOFTWARE
PRO A:99 , TRP A:280 , TYR A:283 , HIS A:288 , SER A:294 , CYS A:295 , CYS A:298 , HIS A:299 , ASN A:317 , LEU A:319 , HIS A:400 , GLY A:401 , PHE A:403 , PHE A:404 , HIS A:405 , HEM A:510 , HEM A:512 , Y1 A:653 , ACT A:656 , HOH A:821 , HOH A:876 , HOH A:955
BINDING SITE FOR RESIDUE HEM A 511
12
BC3
SOFTWARE
ILE A:287 , HIS A:288 , VAL A:293 , PRO A:318 , SER A:325 , CYS A:326 , CYS A:329 , HIS A:330 , LEU A:337 , LYS A:344 , PHE A:404 , PRO A:407 , GLU A:408 , HEM A:511 , Y1 A:654 , ACT A:657 , HOH A:877 , HOH A:1094
BINDING SITE FOR RESIDUE HEM A 512
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
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PROSITE Patterns/Profiles
(1, 2)
Info
All PROSITE Patterns/Profiles
1: MULTIHEME_CYTC (A:163-335)
;
View:
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
MULTIHEME_CYTC
PS51008
Multiheme cytochrome c family profile.
NRFA_WOLSU
163-335
2
A:163-335
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Exons
(0, 0)
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d1fs7a_ (A:)
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Protein Domains
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Class
:
All alpha proteins
(14657)
Fold
:
Multiheme cytochromes
(149)
Superfamily
:
Multiheme cytochromes
(149)
Family
:
Di-heme elbow motif
(53)
Protein domain
:
Cytochrome c nitrite reductase
(7)
Wolinella succinogenes [TaxId: 844]
(3)
1a
d1fs7a_
A:
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CATH Domains
(0, 0)
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Pfam Domains
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Chain A
Asymmetric Unit 1
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Asym.Unit (103 KB)
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Header - Biol.Unit 1
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