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1FOD
Asym. Unit
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Asym.Unit (116 KB)
Biol.Unit 1, α-C (6.2 MB)
Biol.Unit 1 (6.2 MB)
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(1)
Title
:
STRUCTURE OF A MAJOR IMMUNOGENIC SITE ON FOOT-AND-MOUTH DISEASE VIRUS
Authors
:
D. T. Logan, S. Lea, R. Lewis, D. Stuart, E. Fry
Date
:
27 Oct 93 (Deposition) - 31 Jan 94 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.60
Chains
:
Asym. Unit : 1,2,3,4
Biol. Unit 1: 1,2,3,4 (60x)
Keywords
:
Virus, Icosahedral Virus
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
D. Logan, R. Abu-Ghazaleh, W. Blakemore, S. Curry, T. Jackson, A. King, S. Lea, R. Lewis, J. Newman, N. Parry, D. Rowlands, D. Stuart, E. Fry
Structure Of A Major Immunogenic Site On Foot-And-Mouth Disease Virus.
Nature V. 362 566 1993
(for further references see the
PDB file header
)
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Hetero Components
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Sites
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SCOP Domains
(1, 3)
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1a: SCOP_d1fod_1 (4:,2:)
1b: SCOP_d1fod1_ (1:)
1c: SCOP_d1fod3_ (3:)
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Class
:
All beta proteins
(24004)
Fold
:
Nucleoplasmin-like/VP (viral coat and capsid proteins)
(278)
Superfamily
:
Positive stranded ssRNA viruses
(163)
Family
:
Picornaviridae-like VP (VP1, VP2, VP3 and VP4)
(103)
Protein domain
:
Aphthovirus (Foot-and-mouth disease virus) coat proteins
(4)
FMDV (Foot-and-mouth disease virus), strain bfs, 1860 [TaxId: 12110]
(4)
1a
d1fod.1
4:,2:
1b
d1fod1_
1:
1c
d1fod3_
3:
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CATH Domains
(2, 4)
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all CATH domains
1a: CATH_1fod400 (4:15-85)
2a: CATH_1fod300 (3:1-220)
2b: CATH_1fod200 (2:5-218)
2c: CATH_1fod100 (1:1-210)
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Class
:
Few Secondary Structures
(1120)
Architecture
:
Irregular
(1120)
Topology
:
Foot-And-Mouth Disease Virus, subunit 4
(9)
Homologous Superfamily
:
Foot-And-Mouth Disease Virus, subunit 4
(9)
Foot-and-mouth disease virus. Organism_taxid: 12110. Strain: strain bfs, 1860. Foot-and-mouth disease virus. Organism_taxid: 12110. Strain:strain bfs, 1860. Foot-and-mouth disease virus. Organism_taxid: 12110.Strain: strain bfs, 1860.
(1)
1a
1fod400
4:15-85
Class
:
Mainly Beta
(13760)
Architecture
:
Sandwich
(5577)
Topology
:
Jelly Rolls
(1293)
Homologous Superfamily
:
[code=2.60.120.20, no name defined]
(133)
Foot-and-mouth disease virus. Organism_taxid: 12110. Strain: strain bfs, 1860. Foot-and-mouth disease virus. Organism_taxid: 12110. Strain:strain bfs, 1860. Foot-and-mouth disease virus. Organism_taxid: 12110.Strain: strain bfs, 1860.
(1)
2a
1fod300
3:1-220
2b
1fod200
2:5-218
2c
1fod100
1:1-210
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Asym.Unit (116 KB)
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