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1FL3
Asym. Unit
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Asym.Unit (132 KB)
Biol.Unit 1 (65 KB)
Biol.Unit 2 (65 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF THE BLUE FLUORESCENT ANTIBODY (19G2) IN COMPLEX WITH STILBENE HAPTEN AT 277K
Authors
:
R. C. Stevens, A. E. Beuscher Iv
Date
:
11 Aug 00 (Deposition) - 01 Nov 00 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.45
Chains
:
Asym. Unit : A,B,H,L
Biol. Unit 1: H,L (1x)
Biol. Unit 2: A,B (1x)
Keywords
:
Immunoglobulin Fold, Immune System
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
A. Simeonov, M. Matsushita, E. A. Juban, E. H. Thompson, T. Z. Hoffman, A. E. Beuscher 4Th. , M. J. Taylor, P. Wirsching, W. Rettig, J. K. Mccusker, R. C. Stevens, D. P. Millar, P. G. Schultz, R. A. Lerner, K. D. Janda
Blue-Fluorescent Antibodies.
Science V. 290 307 2000
(for further references see the
PDB file header
)
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Hetero Components
(1, 2)
Info
All Hetero Components
1a: 4-(4-STYRYL-PHENYLCARBAMOYL)-BUTYR... (SPBa)
1b: 4-(4-STYRYL-PHENYLCARBAMOYL)-BUTYR... (SPBb)
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No.
Name
Count
Type
Full Name
1
SPB
2
Ligand/Ion
4-(4-STYRYL-PHENYLCARBAMOYL)-BUTYRIC ACID
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Sites
(2, 2)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ILE H:35 , VAL H:39 , GLY H:100 , TRP H:106 , HOH H:215 , TYR L:39 , PRO L:49 , LEU L:97 , GLU L:98 , LEU L:99 , HOH L:226 , HOH L:290 , HOH L:291
BINDING SITE FOR RESIDUE SPB L 225
2
AC2
SOFTWARE
ILE A:35 , VAL A:39 , GLY A:100 , TRP A:106 , HOH A:229 , TYR B:39 , LEU B:97 , LEU B:99 , PHE B:103 , HOH B:218
BINDING SITE FOR RESIDUE SPB A 226
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(1, 2)
Info
All PROSITE Patterns/Profiles
1: IG_MHC (B:197-203,L:197-203)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
IG_MHC
PS00290
Immunoglobulins and major histocompatibility complex proteins signature.
IGKC_MOUSE
84-90
2
B:197-203
L:197-203
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Exons
(0, 0)
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(4, 8)
Info
All SCOP Domains
1a: SCOP_d1fl3a2 (A:117-214)
1b: SCOP_d1fl3h2 (H:117-214)
2a: SCOP_d1fl3b2 (B:114-215)
2b: SCOP_d1fl3l2 (L:114-215)
3a: SCOP_d1fl3a1 (A:2-116)
3b: SCOP_d1fl3h1 (H:2-116)
4a: SCOP_d1fl3b1 (B:2-113)
4b: SCOP_d1fl3l1 (L:2-113)
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)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All beta proteins
(24004)
Fold
:
Immunoglobulin-like beta-sandwich
(7299)
Superfamily
:
Immunoglobulin
(5995)
Family
:
C1 set domains (antibody constant domain-like)
(3013)
Protein domain
:
Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma
(608)
Mouse (Mus musculus) [TaxId: 10090]
(414)
1a
d1fl3a2
A:117-214
1b
d1fl3h2
H:117-214
Protein domain
:
Immunoglobulin light chain kappa constant domain, CL-kappa
(495)
Mouse (Mus musculus) [TaxId: 10090]
(345)
2a
d1fl3b2
B:114-215
2b
d1fl3l2
L:114-215
Family
:
V set domains (antibody variable domain-like)
(1919)
Protein domain
:
Immunoglobulin heavy chain variable domain, VH
(658)
Mouse (Mus musculus), cluster 2.1 [TaxId: 10090]
(14)
3a
d1fl3a1
A:2-116
3b
d1fl3h1
H:2-116
Protein domain
:
Immunoglobulin light chain kappa variable domain, VL-kappa
(616)
Mouse (Mus musculus), cluster 1.1 [TaxId: 10090]
(131)
4a
d1fl3b1
B:2-113
4b
d1fl3l1
L:2-113
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CATH Domains
(1, 8)
Info
all CATH domains
1a: CATH_1fl3B02 (B:114-215)
1b: CATH_1fl3A02 (A:117-214)
1c: CATH_1fl3H02 (H:117-214)
1d: CATH_1fl3B01 (B:2-113)
1e: CATH_1fl3L01 (L:2-113)
1f: CATH_1fl3A01 (A:2-116)
1g: CATH_1fl3H01 (H:2-116)
1h: CATH_1fl3L02 (L:114-215)
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(
)
Organisms
(
)
(
)
Class
:
Mainly Beta
(13760)
Architecture
:
Sandwich
(5577)
Topology
:
Immunoglobulin-like
(3897)
Homologous Superfamily
:
Immunoglobulins
(2282)
House mouse (Mus musculus)
(616)
1a
1fl3B02
B:114-215
1b
1fl3A02
A:117-214
1c
1fl3H02
H:117-214
1d
1fl3B01
B:2-113
1e
1fl3L01
L:2-113
1f
1fl3A01
A:2-116
1g
1fl3H01
H:2-116
1h
1fl3L02
L:114-215
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Pfam Domains
(0, 0)
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Asym.Unit (132 KB)
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