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1FI5
Asym. Unit
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Asym.Unit (432 KB)
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Models
(20 )
Title
:
NMR STRUCTURE OF THE C TERMINAL DOMAIN OF CARDIAC TROPONIN C BOUND TO THE N TERMINAL DOMAIN OF CARDIAC TROPONIN I.
Authors
:
G. M. Gasmi-Seabrook, J. W. Howarth, N. Finley, E. Abusamhadneh, V. Gaponenko, R. M. Brito, R. J. Solaro, P. R. Rosevear
Date
:
03 Aug 00 (Deposition) - 23 Aug 00 (Release) - 24 Feb 09 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A (20 x)
Keywords
:
Troponin C-Troponin I Interaction, Cardiac, Muscle Protein, Calcium Binding Protein, Contractile Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
G. M. Gasmi-Seabrook, J. W. Howarth, N. Finley, E. Abusamhadneh, V. Gaponenko, R. M. Brito, R. J. Solaro, P. R. Rosevear
Solution Structures Of The C-Terminal Domain Of Cardiac Troponin C Free And Bound To The N-Terminal Domain Of Cardiac Troponin I.
Biochemistry V. 38 8313 1999
(for further references see the
PDB file header
)
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Hetero Components
(1, 2)
Info
All Hetero Components
1a: CALCIUM ION (CAa)
1b: CALCIUM ION (CAb)
View:
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Label:
No.
Name
Count
Type
Full Name
1
CA
2
Ligand/Ion
CALCIUM ION
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Sites
(2, 2)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ASP A:105 , ASN A:107 , ASP A:109 , TYR A:111 , GLU A:116
BINDING SITE FOR RESIDUE CA A 162
2
AC2
SOFTWARE
ASP A:141 , ASN A:143 , ASP A:145 , ARG A:147 , GLU A:152
BINDING SITE FOR RESIDUE CA A 163
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available in "Model" view)
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PROSITE Patterns/Profiles
(2, 4)
Info
All PROSITE Patterns/Profiles
1: EF_HAND_2 (-|-|A:92-127|A:128-161)
2: EF_HAND_1 (-|A:105-117|A:141-153)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
EF_HAND_2
PS50222
EF-hand calcium-binding domain profile.
TNNC1_CHICK
33-51
52-87
92-127
128-161
2
-
-
A:92-127
A:128-161
2
EF_HAND_1
PS00018
EF-hand calcium-binding domain.
TNNC1_CHICK
65-77
105-117
141-153
2
-
A:105-117
A:141-153
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Exons
(3, 3)
Info
All Exons
Exon 1.4 (A:81-106)
Exon 1.5 (A:106-152)
Exon 1.6 (A:152-161)
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All Exon Boundaries
1: Boundary 1.3/1.4
2: Boundary 1.4/1.5
3: Boundary 1.5/1.6
4: Boundary 1.6/-
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENSGALT00000002214
1
ENSGALE00000013329
chr12:
545708-545660
49
TNNC1_CHICK
1-8
8
0
-
-
1.2
ENSGALT00000002214
2
ENSGALE00000013327
chr12:
542533-542503
31
TNNC1_CHICK
9-19
11
0
-
-
1.3
ENSGALT00000002214
3
ENSGALE00000013330
chr12:
542326-542180
147
TNNC1_CHICK
19-68
50
0
-
-
1.4
ENSGALT00000002214
4
ENSGALE00000013326
chr12:
541358-541244
115
TNNC1_CHICK
68-106
39
1
A:81-106
26
1.5
ENSGALT00000002214
5
ENSGALE00000013328
chr12:
541140-541004
137
TNNC1_CHICK
106-152
47
1
A:106-152
47
1.6
ENSGALT00000002214
6
ENSGALE00000013325
chr12:
540437-540264
174
TNNC1_CHICK
152-161
10
1
A:152-161
10
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d1fi5a_ (A:)
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)
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)
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)
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)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All alpha proteins
(14657)
Fold
:
EF Hand-like
(739)
Superfamily
:
EF-hand
(657)
Family
:
Calmodulin-like
(356)
Protein domain
:
Troponin C
(53)
Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]
(1)
1a
d1fi5a_
A:
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CATH Domains
(1, 1)
Info
all CATH domains
1a: CATH_1fi5A00 (A:81-161)
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Organisms
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)
(
)
Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
Recoverin; domain 1
(474)
Homologous Superfamily
:
EF-hand
(412)
Chicken (Gallus gallus)
(34)
1a
1fi5A00
A:81-161
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Pfam Domains
(0, 0)
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Chain A
Asymmetric Unit 1
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