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1FEA
Asym. Unit
Info
Asym.Unit (320 KB)
Biol.Unit 1 (161 KB)
Biol.Unit 2 (160 KB)
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(1)
Title
:
UNLIGANDED CRITHIDIA FASCICULATA TRYPANOTHIONE REDUCTASE AT 2.2 ANGSTROM RESOLUTION
Authors
:
C. Strickland, P. Karplus
Date
:
12 Jul 95 (Deposition) - 11 Jan 97 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.20
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,B (1x)
Biol. Unit 2: C,D (1x)
Keywords
:
Redox-Active Center, Oxidoreductase, Flavoprotein, Fad, Nadp
(Keyword Search:
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Reference
:
C. L. Strickland, P. A. Karplus
Crithidia Fasciculata Trypanothione Reductase At 1. 70 A Resolution
To Be Published
(for further references see the
PDB file header
)
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Hetero Components
(1, 4)
Info
All Hetero Components
1a: FLAVIN-ADENINE DINUCLEOTIDE (FADa)
1b: FLAVIN-ADENINE DINUCLEOTIDE (FADb)
1c: FLAVIN-ADENINE DINUCLEOTIDE (FADc)
1d: FLAVIN-ADENINE DINUCLEOTIDE (FADd)
View:
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Label:
No.
Name
Count
Type
Full Name
1
FAD
4
Ligand/Ion
FLAVIN-ADENINE DINUCLEOTIDE
[
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Sites
(4, 4)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ILE A:9 , GLY A:10 , GLY A:12 , SER A:13 , GLY A:14 , ILE A:33 , ASP A:34 , LEU A:35 , ALA A:46 , GLY A:49 , THR A:50 , CYS A:51 , VAL A:54 , GLY A:55 , CYS A:56 , LYS A:59 , GLY A:124 , PHE A:125 , GLY A:126 , ALA A:158 , THR A:159 , GLY A:160 , TYR A:197 , ILE A:198 , ARG A:286 , ARG A:289 , GLY A:325 , ASP A:326 , MET A:332 , LEU A:333 , THR A:334 , PRO A:335 , ALA A:337 , HIS B:460 , PRO B:461
BINDING SITE FOR RESIDUE FAD A 499
2
AC2
SOFTWARE
HIS A:460 , PRO A:461 , GLY B:10 , GLY B:12 , SER B:13 , GLY B:14 , ILE B:33 , ASP B:34 , ALA B:46 , GLY B:49 , THR B:50 , CYS B:51 , VAL B:54 , CYS B:56 , LYS B:59 , GLY B:126 , THR B:159 , GLY B:160 , TYR B:197 , ILE B:198 , ARG B:286 , ARG B:289 , GLY B:325 , ASP B:326 , MET B:332 , LEU B:333 , THR B:334 , PRO B:335 , ALA B:337 , HOH B:510 , HOH B:535
BINDING SITE FOR RESIDUE FAD B 499
3
AC3
SOFTWARE
ILE C:9 , GLY C:10 , GLY C:12 , SER C:13 , GLY C:14 , ILE C:33 , ASP C:34 , LEU C:35 , ALA C:45 , ALA C:46 , GLY C:49 , THR C:50 , CYS C:51 , GLY C:55 , CYS C:56 , LYS C:59 , GLY C:124 , GLY C:126 , ALA C:158 , THR C:159 , GLY C:160 , TYR C:197 , ARG C:286 , ARG C:289 , GLY C:325 , ASP C:326 , MET C:332 , LEU C:333 , THR C:334 , PRO C:335 , ALA C:337 , HOH C:511 , HOH C:521 , HOH C:557 , HIS D:460
BINDING SITE FOR RESIDUE FAD C 499
4
AC4
SOFTWARE
HIS C:460 , GLY D:10 , GLY D:12 , SER D:13 , GLY D:14 , ASP D:34 , LEU D:35 , ALA D:46 , GLY D:49 , THR D:50 , CYS D:51 , CYS D:56 , LYS D:59 , GLY D:124 , GLY D:126 , ALA D:158 , THR D:159 , GLY D:160 , TYR D:197 , ARG D:286 , ARG D:289 , LEU D:293 , GLY D:325 , ASP D:326 , MET D:332 , LEU D:333 , THR D:334 , PRO D:335 , HOH D:506 , HOH D:524 , HOH D:570
BINDING SITE FOR RESIDUE FAD D 499
[
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SAPs(SNPs)/Variants
(1, 4)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_TYTR_CRIFA_001 (E478E, chain A/B/C/D, )
View:
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Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_TYTR_CRIFA_001
*
Q
479
E
TYTR_CRIFA
---
---
A/B/C/D
E
478
E
* ID not provided by source
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(1, 4)
Info
All PROSITE Patterns/Profiles
1: PYRIDINE_REDOX_1 (A:48-58,B:48-58,C:48-58,D:48-58)
;
View:
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
PYRIDINE_REDOX_1
PS00076
Pyridine nucleotide-disulphide oxidoreductases class-I active site.
TYTR_CRIFA
49-59
4
A:48-58
B:48-58
C:48-58
D:48-58
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Exons
(0, 0)
Info
All Exons
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(2, 12)
Info
All SCOP Domains
1a: SCOP_d1feaa3 (A:358-487)
1b: SCOP_d1feab3 (B:358-484)
1c: SCOP_d1feac3 (C:358-487)
1d: SCOP_d1fead3 (D:358-484)
2a: SCOP_d1feaa1 (A:1-169,A:287-357)
2b: SCOP_d1feab1 (B:1-169,B:287-357)
2c: SCOP_d1feab2 (B:170-286)
2d: SCOP_d1feac1 (C:1-169,C:287-357)
2e: SCOP_d1feac2 (C:170-286)
2f: SCOP_d1fead1 (D:1-169,D:287-357)
2g: SCOP_d1fead2 (D:170-286)
2h: SCOP_d1feaa2 (A:170-286)
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)
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)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
CO dehydrogenase flavoprotein C-domain-like
(111)
Superfamily
:
FAD/NAD-linked reductases, dimerisation (C-terminal) domain
(76)
Family
:
FAD/NAD-linked reductases, dimerisation (C-terminal) domain
(76)
Protein domain
:
Trypanothione reductase
(10)
Crithidia fasciculata [TaxId: 5656]
(6)
1a
d1feaa3
A:358-487
1b
d1feab3
B:358-484
1c
d1feac3
C:358-487
1d
d1fead3
D:358-484
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
FAD/NAD(P)-binding domain
(331)
Superfamily
:
FAD/NAD(P)-binding domain
(331)
Family
:
FAD/NAD-linked reductases, N-terminal and central domains
(92)
Protein domain
:
Trypanothione reductase
(10)
Crithidia fasciculata [TaxId: 5656]
(6)
2a
d1feaa1
A:1-169,A:287-357
2b
d1feab1
B:1-169,B:287-357
2c
d1feab2
B:170-286
2d
d1feac1
C:1-169,C:287-357
2e
d1feac2
C:170-286
2f
d1fead1
D:1-169,D:287-357
2g
d1fead2
D:170-286
2h
d1feaa2
A:170-286
[
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CATH Domains
(2, 12)
Info
all CATH domains
1a: CATH_1feaB03 (B:360-484)
1b: CATH_1feaD03 (D:360-484)
1c: CATH_1feaA03 (A:360-486)
1d: CATH_1feaC03 (C:360-486)
2a: CATH_1feaA01 (A:1-163,A:285-359)
2b: CATH_1feaA02 (A:164-284)
2c: CATH_1feaB02 (B:164-284)
2d: CATH_1feaC02 (C:164-284)
2e: CATH_1feaD02 (D:164-284)
2f: CATH_1feaB01 (B:1-163,B:285-359)
2g: CATH_1feaC01 (C:1-163,C:285-359)
2h: CATH_1feaD01 (D:1-163,D:285-359)
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)
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)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
2-Layer Sandwich
(8480)
Topology
:
Enolase-like; domain 1
(252)
Homologous Superfamily
:
[code=3.30.390.30, no name defined]
(99)
Crithidia fasciculata. Organism_taxid: 5656.
(3)
1a
1feaB03
B:360-484
1b
1feaD03
D:360-484
1c
1feaA03
A:360-486
1d
1feaC03
C:360-486
Architecture
:
3-Layer(bba) Sandwich
(528)
Topology
:
FAD/NAD(P)-binding domain
(373)
Homologous Superfamily
:
[code=3.50.50.60, no name defined]
(373)
Crithidia fasciculata. Organism_taxid: 5656.
(3)
2a
1feaA01
A:1-163,A:285-359
2b
1feaA02
A:164-284
2c
1feaB02
B:164-284
2d
1feaC02
C:164-284
2e
1feaD02
D:164-284
2f
1feaB01
B:1-163,B:285-359
2g
1feaC01
C:1-163,C:285-359
2h
1feaD01
D:1-163,D:285-359
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Pfam Domains
(0, 0)
Info
all PFAM domains
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