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1F9P
Asym. Unit
Info
Asym.Unit (21 KB)
Biol.Unit 1 (17 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF CONNECTIVE TISSUE ACTIVATING PEPTIDE-III(CTAP-III) COMPLEXED WITH POLYVINYLSULFONIC ACID
Authors
:
J. Yang, T. Faulk, R. Aster, G. Visentin, B. Edwards, C. Castor
Date
:
11 Jul 00 (Deposition) - 26 Aug 03 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.93
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Chemokine-Heparin Analog Complex, Blood Clotting
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
J. Yang, T. Faulk, R. Aster, G. Visentin, B. Edwards, C. Castor
Structure Of The Cxc Chemokine, Connective Tissue Activating Peptide-Iii, Complexed With The Heparin Analogue, Polyvinylsulfonic Acid
To Be Published
(for further references see the
PDB file header
)
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Hetero Components
(1, 3)
Info
All Hetero Components
1a: ETHANESULFONIC ACID (ESAa)
1b: ETHANESULFONIC ACID (ESAb)
1c: ETHANESULFONIC ACID (ESAc)
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Label:
No.
Name
Count
Type
Full Name
1
ESA
3
Ligand/Ion
ETHANESULFONIC ACID
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Sites
(3, 3)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
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Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
HIS A:35 , PRO A:36 , ARG A:74 , ESA A:102 , ESA A:103
BINDING SITE FOR RESIDUE ESA A 101
2
AC2
SOFTWARE
HIS A:35 , LYS A:37 , ESA A:101 , ESA A:103
BINDING SITE FOR RESIDUE ESA A 102
3
AC3
SOFTWARE
HIS A:35 , PRO A:36 , LYS A:37 , LYS A:81 , ESA A:101 , ESA A:102 , HOH A:324
BINDING SITE FOR RESIDUE ESA A 103
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: SMALL_CYTOKINES_CXC (A:25-69)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
SMALL_CYTOKINES_CXC
PS00471
Small cytokines (intercrine/chemokine) C-x-C subfamily signature.
CXCL7_HUMAN
63-107
1
A:25-69
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Exons
(3, 3)
Info
All Exons
Exon 1.1 (A:6-12)
Exon 1.2 (A:12-57)
Exon 1.3 (A:57-86)
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All Exon Boundaries
1: Boundary -/1.1
2: Boundary 1.1/1.2
3: Boundary 1.2/1.3
4: Boundary 1.3/-
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENST00000296028
1
ENSE00001077818
chr4:
74853914-74853673
242
CXCL7_HUMAN
1-50
50
1
A:6-12
7
1.2
ENST00000296028
2
ENSE00001077819
chr4:
74853369-74853234
136
CXCL7_HUMAN
50-95
46
1
A:12-57
46
1.3
ENST00000296028
3
ENSE00001077820
chr4:
74853091-74852755
337
CXCL7_HUMAN
95-128
34
1
A:57-86
30
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d1f9pa_ (A:)
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(
)
(
)
Folds
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)
(
)
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(
)
(
)
Families
(
)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
IL8-like
(118)
Superfamily
:
Interleukin 8-like chemokines
(117)
Family
:
Interleukin 8-like chemokines
(113)
Protein domain
:
Platelet basic protein, PBP
(3)
Human (Homo sapiens) [TaxId: 9606]
(3)
1a
d1f9pa_
A:
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CATH Domains
(1, 1)
Info
all CATH domains
1a: CATH_1f9pA00 (A:6-86)
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)
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)
Organisms
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)
(
)
Class
:
Mainly Beta
(13760)
Architecture
:
Beta Barrel
(4804)
Topology
:
OB fold (Dihydrolipoamide Acetyltransferase, E2P)
(1040)
Homologous Superfamily
:
[code=2.40.50.40, no name defined]
(161)
Human (Homo sapiens)
(86)
1a
1f9pA00
A:6-86
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Pfam Domains
(0, 0)
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Chain A
Asymmetric Unit 1
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