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1F91
Biol. Unit 1
Info
Asym.Unit (253 KB)
Biol.Unit 1 (126 KB)
Biol.Unit 2 (127 KB)
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(1)
Title
:
BETA-KETOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE I IN COMPLEX WITH C10 FATTY ACID SUBSTRATE
Authors
:
J. G. Olsen, A. Kadziola, P. V. Wettstein-Knowles, M. Siggaard- Andersen, S. Larsen
Date
:
06 Jul 00 (Deposition) - 11 Apr 01 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.40
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,B (1x)
Biol. Unit 2: C,D (1x)
Keywords
:
Thiolase Fold Family, Dimer, Transferase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
J. G. Olsen, A. Kadziola, P. Von Wettstein-Knowles, M. Siggaard-Andersen, S. Larsen
Structures Of Beta-Ketoacyl-Acyl Carrier Protein Synthase I Complexed With Fatty Acids Elucidate Its Catalytic Machinery.
Structure V. 9 233 2001
(for further references see the
PDB file header
)
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Hetero Components
(1, 2)
Info
All Hetero Components
1a: DECANOIC ACID (DKAa)
1b: DECANOIC ACID (DKAb)
1c: DECANOIC ACID (DKAc)
1d: DECANOIC ACID (DKAd)
2a: HYDROXIDE ION (OHa)
2b: HYDROXIDE ION (OHb)
2c: HYDROXIDE ION (OHc)
2d: HYDROXIDE ION (OHd)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
DKA
2
Ligand/Ion
DECANOIC ACID
2
OH
-1
Ligand/Ion
HYDROXIDE ION
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Sites
(4, 4)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC5 (SOFTWARE)
4: AC6 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
HIS A:298 , LYS A:328 , ALA A:338 , GLU A:342 , ASN A:388 , SER A:389
BINDING SITE FOR RESIDUE OH A 501
2
AC2
SOFTWARE
ALA B:338 , GLU B:342 , ASN B:388 , SER B:389
BINDING SITE FOR RESIDUE OH B 502
3
AC5
SOFTWARE
GLY A:106 , GLY A:107 , ALA A:162 , SER A:163 , PHE A:201 , HIS A:333 , GLY A:391 , PHE A:392 , HOH A:984 , MET B:138
BINDING SITE FOR RESIDUE DKA A 901
4
AC6
SOFTWARE
MET A:138 , GLY B:106 , ALA B:162 , SER B:163 , MET B:197 , PHE B:201 , GLY B:391 , PHE B:392 , HOH B:1006
BINDING SITE FOR RESIDUE DKA B 902
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SAPs(SNPs)/Variants
(4, 8)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
1: VAR_FABB_ECOLI_001 (V4T, chain A/B, )
2: VAR_FABB_ECOLI_002 (S140F, chain A/B, )
3: VAR_FABB_ECOLI_003 (G299S, chain A/B, )
4: VAR_FABB_ECOLI_004 (A329V, chain A/B, )
View:
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Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_FABB_ECOLI_001
*
A
4
T
FABB_ECOLI
---
---
A/B
V
4
T
2
UniProt
VAR_FABB_ECOLI_002
*
S
140
F
FABB_ECOLI
---
---
A/B
S
140
F
3
UniProt
VAR_FABB_ECOLI_003
*
G
299
S
FABB_ECOLI
---
---
A/B
G
299
S
4
UniProt
VAR_FABB_ECOLI_004
*
A
329
V
FABB_ECOLI
---
---
A/B
A
329
V
* ID not provided by source
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(1, 2)
Info
All PROSITE Patterns/Profiles
1: B_KETOACYL_SYNTHASE (A:154-170,B:154-170)
;
View:
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
B_KETOACYL_SYNTHASE
PS00606
Beta-ketoacyl synthases active site.
FABB_ECOLI
154-170
2
A:154-170
B:154-170
-
-
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Exons
(0, 0)
Info
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(1, 8)
Info
All SCOP Domains
1a: SCOP_d1f91a1 (A:1-253)
1b: SCOP_d1f91a2 (A:254-406)
1c: SCOP_d1f91b1 (B:1-253)
1d: SCOP_d1f91b2 (B:254-406)
1e: SCOP_d1f91c1 (C:1-253)
1f: SCOP_d1f91c2 (C:254-406)
1g: SCOP_d1f91d1 (D:1-253)
1h: SCOP_d1f91d2 (D:254-406)
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Protein Domains
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(
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Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
Thiolase-like
(231)
Superfamily
:
Thiolase-like
(231)
Family
:
Thiolase-related
(67)
Protein domain
:
Beta-ketoacyl-ACP synthase I
(17)
Escherichia coli [TaxId: 562]
(17)
1a
d1f91a1
A:1-253
1b
d1f91a2
A:254-406
1c
d1f91b1
B:1-253
1d
d1f91b2
B:254-406
1e
d1f91c1
C:1-253
1f
d1f91c2
C:254-406
1g
d1f91d1
D:1-253
1h
d1f91d2
D:254-406
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CATH Domains
(1, 8)
Info
all CATH domains
1a: CATH_1f91A02 (A:260-404)
1b: CATH_1f91A01 (A:6-259)
1c: CATH_1f91B01 (B:6-259)
1d: CATH_1f91C01 (C:6-259)
1e: CATH_1f91D01 (D:6-259)
1f: CATH_1f91B02 (B:260-404)
1g: CATH_1f91C02 (C:260-404)
1h: CATH_1f91D02 (D:260-404)
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Organisms
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Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Peroxisomal Thiolase; Chain A, domain 1
(130)
Homologous Superfamily
:
[code=3.40.47.10, no name defined]
(130)
Escherichia coli. Organism_taxid: 562.
(23)
1a
1f91A02
A:260-404
1b
1f91A01
A:6-259
1c
1f91B01
B:6-259
1d
1f91C01
C:6-259
1e
1f91D01
D:6-259
1f
1f91B02
B:260-404
1g
1f91C02
C:260-404
1h
1f91D02
D:260-404
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Pfam Domains
(0, 0)
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Asymmetric Unit 1
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Show PDB file:
Asym.Unit (253 KB)
Header - Asym.Unit
Biol.Unit 1 (126 KB)
Header - Biol.Unit 1
Biol.Unit 2 (127 KB)
Header - Biol.Unit 2
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