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1F91
Asym. Unit
Info
Asym.Unit (253 KB)
Biol.Unit 1 (126 KB)
Biol.Unit 2 (127 KB)
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(1)
Title
:
BETA-KETOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE I IN COMPLEX WITH C10 FATTY ACID SUBSTRATE
Authors
:
J. G. Olsen, A. Kadziola, P. V. Wettstein-Knowles, M. Siggaard- Andersen, S. Larsen
Date
:
06 Jul 00 (Deposition) - 11 Apr 01 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.40
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,B (1x)
Biol. Unit 2: C,D (1x)
Keywords
:
Thiolase Fold Family, Dimer, Transferase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
J. G. Olsen, A. Kadziola, P. Von Wettstein-Knowles, M. Siggaard-Andersen, S. Larsen
Structures Of Beta-Ketoacyl-Acyl Carrier Protein Synthase I Complexed With Fatty Acids Elucidate Its Catalytic Machinery.
Structure V. 9 233 2001
(for further references see the
PDB file header
)
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Hetero Components
(2, 8)
Info
All Hetero Components
1a: DECANOIC ACID (DKAa)
1b: DECANOIC ACID (DKAb)
1c: DECANOIC ACID (DKAc)
1d: DECANOIC ACID (DKAd)
2a: HYDROXIDE ION (OHa)
2b: HYDROXIDE ION (OHb)
2c: HYDROXIDE ION (OHc)
2d: HYDROXIDE ION (OHd)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
DKA
4
Ligand/Ion
DECANOIC ACID
2
OH
4
Ligand/Ion
HYDROXIDE ION
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Sites
(8, 8)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
7: AC7 (SOFTWARE)
8: AC8 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
HIS A:298 , LYS A:328 , ALA A:338 , GLU A:342 , ASN A:388 , SER A:389
BINDING SITE FOR RESIDUE OH A 501
2
AC2
SOFTWARE
ALA B:338 , GLU B:342 , ASN B:388 , SER B:389
BINDING SITE FOR RESIDUE OH B 502
3
AC3
SOFTWARE
ALA C:338 , GLY C:339 , GLU C:342 , ASN C:388 , SER C:389
BINDING SITE FOR RESIDUE OH C 503
4
AC4
SOFTWARE
HIS D:298 , LYS D:328 , ALA D:338 , GLU D:342 , ASN D:388 , SER D:389
BINDING SITE FOR RESIDUE OH D 504
5
AC5
SOFTWARE
GLY A:106 , GLY A:107 , ALA A:162 , SER A:163 , PHE A:201 , HIS A:333 , GLY A:391 , PHE A:392 , HOH A:984 , MET B:138
BINDING SITE FOR RESIDUE DKA A 901
6
AC6
SOFTWARE
MET A:138 , GLY B:106 , ALA B:162 , SER B:163 , MET B:197 , PHE B:201 , GLY B:391 , PHE B:392 , HOH B:1006
BINDING SITE FOR RESIDUE DKA B 902
7
AC7
SOFTWARE
GLY C:106 , GLY C:107 , ALA C:162 , SER C:163 , GLU C:200 , PHE C:201 , GLY C:391 , PHE C:392 , HOH C:912 , MET D:138
BINDING SITE FOR RESIDUE DKA C 903
8
AC8
SOFTWARE
GLY D:106 , GLY D:107 , ALA D:162 , SER D:163 , PHE D:201 , GLY D:391 , PHE D:392 , HOH D:952
BINDING SITE FOR RESIDUE DKA D 904
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SAPs(SNPs)/Variants
(4, 16)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_FABB_ECOLI_001 (V4T, chain A/B/C/D, )
2: VAR_FABB_ECOLI_002 (S140F, chain A/B/C/D, )
3: VAR_FABB_ECOLI_003 (G299S, chain A/B/C/D, )
4: VAR_FABB_ECOLI_004 (A329V, chain A/B/C/D, )
View:
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Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_FABB_ECOLI_001
*
A
4
T
FABB_ECOLI
---
---
A/B/C/D
V
4
T
2
UniProt
VAR_FABB_ECOLI_002
*
S
140
F
FABB_ECOLI
---
---
A/B/C/D
S
140
F
3
UniProt
VAR_FABB_ECOLI_003
*
G
299
S
FABB_ECOLI
---
---
A/B/C/D
G
299
S
4
UniProt
VAR_FABB_ECOLI_004
*
A
329
V
FABB_ECOLI
---
---
A/B/C/D
A
329
V
* ID not provided by source
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(1, 4)
Info
All PROSITE Patterns/Profiles
1: B_KETOACYL_SYNTHASE (A:154-170,B:154-170,C:154-170,D:15...)
;
View:
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
B_KETOACYL_SYNTHASE
PS00606
Beta-ketoacyl synthases active site.
FABB_ECOLI
154-170
4
A:154-170
B:154-170
C:154-170
D:154-170
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Exons
(0, 0)
Info
All Exons
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 8)
Info
All SCOP Domains
1a: SCOP_d1f91a1 (A:1-253)
1b: SCOP_d1f91a2 (A:254-406)
1c: SCOP_d1f91b1 (B:1-253)
1d: SCOP_d1f91b2 (B:254-406)
1e: SCOP_d1f91c1 (C:1-253)
1f: SCOP_d1f91c2 (C:254-406)
1g: SCOP_d1f91d1 (D:1-253)
1h: SCOP_d1f91d2 (D:254-406)
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Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
Thiolase-like
(231)
Superfamily
:
Thiolase-like
(231)
Family
:
Thiolase-related
(67)
Protein domain
:
Beta-ketoacyl-ACP synthase I
(17)
Escherichia coli [TaxId: 562]
(17)
1a
d1f91a1
A:1-253
1b
d1f91a2
A:254-406
1c
d1f91b1
B:1-253
1d
d1f91b2
B:254-406
1e
d1f91c1
C:1-253
1f
d1f91c2
C:254-406
1g
d1f91d1
D:1-253
1h
d1f91d2
D:254-406
[
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CATH Domains
(1, 8)
Info
all CATH domains
1a: CATH_1f91A02 (A:260-404)
1b: CATH_1f91A01 (A:6-259)
1c: CATH_1f91B01 (B:6-259)
1d: CATH_1f91C01 (C:6-259)
1e: CATH_1f91D01 (D:6-259)
1f: CATH_1f91B02 (B:260-404)
1g: CATH_1f91C02 (C:260-404)
1h: CATH_1f91D02 (D:260-404)
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Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Peroxisomal Thiolase; Chain A, domain 1
(130)
Homologous Superfamily
:
[code=3.40.47.10, no name defined]
(130)
Escherichia coli. Organism_taxid: 562.
(23)
1a
1f91A02
A:260-404
1b
1f91A01
A:6-259
1c
1f91B01
B:6-259
1d
1f91C01
C:6-259
1e
1f91D01
D:6-259
1f
1f91B02
B:260-404
1g
1f91C02
C:260-404
1h
1f91D02
D:260-404
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Pfam Domains
(0, 0)
Info
all PFAM domains
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Chain D
Asymmetric Unit 1
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Asym.Unit (253 KB)
Header - Asym.Unit
Biol.Unit 1 (126 KB)
Header - Biol.Unit 1
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