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1F55
Asym. Unit
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Asym.Unit (597 KB)
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Models
(30 )
Title
:
SOLUTION STRUCTURE OF THE CALCIUM BOUND N-TERMINAL DOMAIN OF YEAST CALMODULIN
Authors
:
H. Ishida, K. Takahashi, K. Nakashima, Y. Kumaki, M. Nakata, K. Hikichi, M. Yazawa
Date
:
13 Jun 00 (Deposition) - 15 Jul 03 (Release) - 24 Feb 09 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A (30 x)
Keywords
:
Ef-Hand, Helix-Loop-Helix, Transport Protein
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
H. Ishida, K. Takahashi, K. Nakashima, Y. Kumaki, M. Nakata, K. Hikichi, M. Yazawa
Solution Structures Of The N-Terminal Domain Of Yeast Calmodulin: Ca2+-Dependent Conformational Change And Its Functional Implication
Biochemistry V. 39 13660 2000
(for further references see the
PDB file header
)
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Hetero Components
(1, 2)
Info
All Hetero Components
1a: CALCIUM ION (CAa)
1b: CALCIUM ION (CAb)
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No.
Name
Count
Type
Full Name
1
CA
2
Ligand/Ion
CALCIUM ION
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Sites
(2, 2)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ASP A:20 , ASP A:22 , ASN A:24 , SER A:26 , GLU A:31
BINDING SITE FOR RESIDUE CA A 101
2
AC2
SOFTWARE
ASP A:56 , ASP A:58 , ASN A:60 , GLN A:62 , ILE A:63 , GLU A:67
BINDING SITE FOR RESIDUE CA A 102
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SAPs(SNPs)/Variants
(0, 0)
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PROSITE Patterns/Profiles
(2, 4)
Info
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1: EF_HAND_2 (A:7-42|A:43-77|-)
2: EF_HAND_1 (A:20-32|A:56-68|-)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
EF_HAND_2
PS50222
EF-hand calcium-binding domain profile.
CALM_YEAST
8-43
44-79
81-116
2
A:7-42
A:43-77
-
2
EF_HAND_1
PS00018
EF-hand calcium-binding domain.
CALM_YEAST
21-33
57-69
94-106
2
A:20-32
A:56-68
-
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Exons
(1, 1)
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All Exons
Exon 1.1 (A:1-77)
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1: Boundary -/1.1
2: Boundary 1.1/-
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
YBR109C
1
YBR109C.1
II:458356-457913
444
CALM_YEAST
1-147
147
1
A:1-77
77
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SCOP Domains
(1, 1)
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1a: SCOP_d1f55a_ (A:)
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Organisms
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Class
:
All alpha proteins
(14657)
Fold
:
EF Hand-like
(739)
Superfamily
:
EF-hand
(657)
Family
:
Calmodulin-like
(356)
Protein domain
:
Calmodulin
(152)
Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
(4)
1a
d1f55a_
A:
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CATH Domains
(1, 1)
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all CATH domains
1a: CATH_1f55A00 (A:1-77)
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Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
Recoverin; domain 1
(474)
Homologous Superfamily
:
EF-hand
(412)
Baker's yeast (Saccharomyces cerevisiae)
(8)
1a
1f55A00
A:1-77
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Pfam Domains
(0, 0)
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Chain A
Asymmetric Unit 1
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