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1EY3
Biol. Unit 1
Info
Asym.Unit (262 KB)
Biol.Unit 1 (256 KB)
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(1)
Title
:
STRUCTURE OF ENOYL-COA HYDRATASE COMPLEXED WITH THE SUBSTRATE DAC-COA
Authors
:
B. J. Bahnson, V. E. Anderson, G. A. Petsko
Date
:
05 May 00 (Deposition) - 27 Feb 02 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.30
Chains
:
Asym. Unit : A,B,C,D,E,F
Biol. Unit 1: A,B,C,D,E,F (1x)
Keywords
:
Beta-Oxidation, Crotonase, Enoyl-Coa Hydratase, Fatty Acid Metabolism, Beta-Elimination, Syn-Addition, Concerted Reaction, Lyase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
B. J. Bahnson, V. E. Anderson, G. A. Petsko
Structural Mechanism Of Enoyl-Coa Hydratase: Three Atoms From A Single Water Are Added In Either An E1Cb Stepwise Or Concerted Fashion.
Biochemistry V. 41 2621 2002
(for further references see the
PDB file header
)
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Hetero Components
(1, 6)
Info
All Hetero Components
1a: 4-(N,N-DIMETHYLAMINO)CINNAMOYL-COA (DAKa)
1b: 4-(N,N-DIMETHYLAMINO)CINNAMOYL-COA (DAKb)
1c: 4-(N,N-DIMETHYLAMINO)CINNAMOYL-COA (DAKc)
1d: 4-(N,N-DIMETHYLAMINO)CINNAMOYL-COA (DAKd)
1e: 4-(N,N-DIMETHYLAMINO)CINNAMOYL-COA (DAKe)
1f: 4-(N,N-DIMETHYLAMINO)CINNAMOYL-COA (DAKf)
View:
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Label:
No.
Name
Count
Type
Full Name
1
DAK
6
Ligand/Ion
4-(N,N-DIMETHYLAMINO)CINNAMOYL-COA
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Sites
(6, 6)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
View:
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
LYS A:56 , ALA A:57 , LEU A:58 , ALA A:60 , ALA A:96 , GLY A:97 , ALA A:98 , ASP A:99 , ILE A:100 , LEU A:117 , TRP A:120 , TYR A:137 , GLY A:141 , PRO A:163 , LEU A:167 , GLY A:172 , ARG A:197 , HOH A:501 , HOH A:542 , HOH A:545 , HOH A:565 , PHE B:263 , LYS B:282
BINDING SITE FOR RESIDUE DAK A 500
2
AC2
SOFTWARE
LYS B:56 , ALA B:57 , LEU B:58 , ALA B:96 , GLY B:97 , ALA B:98 , ASP B:99 , ILE B:100 , LYS B:101 , LEU B:117 , TRP B:120 , GLY B:141 , PRO B:163 , LEU B:167 , GLY B:172 , HOH B:518 , HOH B:554 , HOH B:563 , PHE C:263 , PHE C:279 , LYS C:282
BINDING SITE FOR RESIDUE DAK B 501
3
AC3
SOFTWARE
PHE A:263 , LYS C:56 , ALA C:57 , LEU C:58 , ALA C:60 , ALA C:96 , GLY C:97 , ALA C:98 , ASP C:99 , ILE C:100 , LEU C:117 , TRP C:120 , LEU C:139 , GLY C:141 , PRO C:163 , LEU C:167 , GLY C:172
BINDING SITE FOR RESIDUE DAK C 502
4
AC4
SOFTWARE
LYS D:56 , ALA D:57 , LEU D:58 , ALA D:60 , LYS D:92 , ALA D:96 , GLY D:97 , ALA D:98 , ASP D:99 , ILE D:100 , LYS D:101 , LEU D:117 , TRP D:120 , GLY D:141 , PRO D:163 , LEU D:167 , GLY D:172 , HOH D:524 , HOH D:571 , LYS E:260 , PHE E:263 , LYS E:282
BINDING SITE FOR RESIDUE DAK D 503
5
AC5
SOFTWARE
LYS E:56 , ALA E:57 , LEU E:58 , ALA E:60 , ALA E:96 , GLY E:97 , ALA E:98 , ASP E:99 , ILE E:100 , LYS E:101 , LEU E:117 , TRP E:120 , GLY E:141 , PRO E:163 , LEU E:167 , GLY E:172 , HOH E:525 , HOH E:541 , PHE F:263 , LYS F:282
BINDING SITE FOR RESIDUE DAK E 504
6
AC6
SOFTWARE
PHE D:263 , LYS F:56 , ALA F:57 , LEU F:58 , ALA F:60 , ALA F:96 , GLY F:97 , ALA F:98 , ASP F:99 , ILE F:100 , LEU F:117 , TRP F:120 , GLY F:141 , PRO F:163 , LEU F:167 , GLY F:172 , ARG F:197 , HOH F:528 , HOH F:553
BINDING SITE FOR RESIDUE DAK F 505
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
(1, 6)
Info
All PROSITE Patterns/Profiles
1: ENOYL_COA_HYDRATASE (A:131-151,B:131-151,C:131-151,D:13...)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
ENOYL_COA_HYDRATASE
PS00166
Enoyl-CoA hydratase/isomerase signature.
ECHM_RAT
131-151
6
A:131-151
B:131-151
C:131-151
D:131-151
E:131-151
F:131-151
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Exons
(0, 0)
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(1, 6)
Info
All SCOP Domains
1a: SCOP_d1ey3a_ (A:)
1b: SCOP_d1ey3e_ (E:)
1c: SCOP_d1ey3f_ (F:)
1d: SCOP_d1ey3b_ (B:)
1e: SCOP_d1ey3c_ (C:)
1f: SCOP_d1ey3d_ (D:)
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Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
ClpP/crotonase
(207)
Superfamily
:
ClpP/crotonase
(207)
Family
:
Crotonase-like
(39)
Protein domain
:
Enoyl-CoA hydratase (crotonase)
(5)
Norway rat (Rattus norvegicus) [TaxId: 10116]
(4)
1a
d1ey3a_
A:
1b
d1ey3e_
E:
1c
d1ey3f_
F:
1d
d1ey3b_
B:
1e
d1ey3c_
C:
1f
d1ey3d_
D:
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CATH Domains
(2, 12)
Info
all CATH domains
1a: CATH_1ey3A01 (A:33-232)
1b: CATH_1ey3B01 (B:33-232)
1c: CATH_1ey3C01 (C:33-232)
1d: CATH_1ey3D01 (D:33-232)
1e: CATH_1ey3E01 (E:33-232)
1f: CATH_1ey3F01 (F:33-232)
2a: CATH_1ey3A02 (A:233-290)
2b: CATH_1ey3E02 (E:233-290)
2c: CATH_1ey3F02 (F:233-290)
2d: CATH_1ey3B02 (B:233-290)
2e: CATH_1ey3C02 (C:233-290)
2f: CATH_1ey3D02 (D:233-290)
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)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
Alpha-Beta Complex
(3881)
Topology
:
2-enoyl-CoA Hydratase; Chain A, domain 1
(89)
Homologous Superfamily
:
2-enoyl-CoA Hydratase; Chain A, domain 1
(89)
Norway rat (Rattus norvegicus)
(6)
1a
1ey3A01
A:33-232
1b
1ey3B01
B:33-232
1c
1ey3C01
C:33-232
1d
1ey3D01
D:33-232
1e
1ey3E01
E:33-232
1f
1ey3F01
F:33-232
Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
Lyase 2-enoyl-coa Hydratase; Chain A, domain 2
(25)
Homologous Superfamily
:
Lyase 2-enoyl-coa Hydratase, Chain A, domain 2
(25)
Norway rat (Rattus norvegicus)
(5)
2a
1ey3A02
A:233-290
2b
1ey3E02
E:233-290
2c
1ey3F02
F:233-290
2d
1ey3B02
B:233-290
2e
1ey3C02
C:233-290
2f
1ey3D02
D:233-290
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Pfam Domains
(0, 0)
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Chain F
Asymmetric Unit 1
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Asym.Unit (262 KB)
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