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1EMU
Asym. Unit
Info
Asym.Unit (32 KB)
Biol.Unit 1 (28 KB)
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(1)
Title
:
STRUCTURE OF THE AXIN RGS-HOMOLOGOUS DOMAIN IN COMPLEX WITH A SAMP REPEAT FROM APC
Authors
:
K. E. Spink, P. Polakis, W. I. Weis
Date
:
17 Mar 00 (Deposition) - 05 Jul 00 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.90
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Rgs Domain, Signaling Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
K. E. Spink, P. Polakis, W. I. Weis
Structural Basis Of The Axin-Adenomatous Polyposis Coli Interaction.
Embo J. V. 19 2270 2000
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Hetero Components
(1, 7)
Info
All Hetero Components
1a: GLYCEROL (GOLa)
1b: GLYCEROL (GOLb)
1c: GLYCEROL (GOLc)
1d: GLYCEROL (GOLd)
1e: GLYCEROL (GOLe)
1f: GLYCEROL (GOLf)
1g: GLYCEROL (GOLg)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
GOL
7
Ligand/Ion
GLYCEROL
[
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Sites
(7, 7)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
7: AC7 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
PHE A:204 , GLY A:207 , CYS A:208 , LYS A:211 , GOL A:503
BINDING SITE FOR RESIDUE GOL A 501
2
AC2
SOFTWARE
LEU A:120 , LYS A:211 , TYR A:244 , LEU A:245 , GOL A:503
BINDING SITE FOR RESIDUE GOL A 502
3
AC3
SOFTWARE
LYS A:211 , LEU A:213 , LEU A:239 , GOL A:501 , GOL A:502
BINDING SITE FOR RESIDUE GOL A 503
4
AC4
SOFTWARE
ARG A:195 , THR A:197 , LYS A:198 , PRO A:199
BINDING SITE FOR RESIDUE GOL A 504
5
AC5
SOFTWARE
GLN A:133 , ASP A:134 , SER A:137 , GLU A:172 , LYS A:176
BINDING SITE FOR RESIDUE GOL A 505
6
AC6
SOFTWARE
LYS A:144 , LYS A:163 , LEU A:164 , GLU A:165 , ASN A:170 , HOH A:348 , SER B:2045
BINDING SITE FOR RESIDUE GOL A 506
7
AC7
SOFTWARE
LYS A:198 , TYR A:247
BINDING SITE FOR RESIDUE GOL A 507
[
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SAPs(SNPs)/Variants
(1, 1)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_015589 (L143R, chain A, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_015589
L
106
R
AXIN1_HUMAN
Disease (HCC)
---
A
L
143
R
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: RGS (A:125-248)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
RGS
PS50132
RGS domain profile.
AXIN1_HUMAN
88-211
1
A:125-248
[
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Exons
(2, 2)
Info
All Exons
Exon 1.20g (B:2035-2050)
Exon 2.2a (A:117-248)
View:
Select:
Label:
All Exon Boundaries
1: Boundary 1.19/1.20g
2: Boundary 1.20g/-
3: Boundary 2.1b/2.2a
4: Boundary 2.2a/2.3
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.2c
ENST00000257430
2c
ENSE00001913252
chr5:
112073585-112073622
38
APC_HUMAN
-
0
0
-
-
1.4
ENST00000257430
4
ENSE00002144134
chr5:
112090570-112090722
153
APC_HUMAN
1-45
45
0
-
-
1.5b
ENST00000257430
5b
ENSE00000917796
chr5:
112102023-112102107
85
APC_HUMAN
46-74
29
0
-
-
1.6b
ENST00000257430
6b
ENSE00000972225
chr5:
112102886-112103087
202
APC_HUMAN
74-141
68
0
-
-
1.7
ENST00000257430
7
ENSE00000917798
chr5:
112111326-112111434
109
APC_HUMAN
141-177
37
0
-
-
1.8a
ENST00000257430
8a
ENSE00000972226
chr5:
112116487-112116600
114
APC_HUMAN
178-215
38
0
-
-
1.9
ENST00000257430
9
ENSE00000972227
chr5:
112128143-112128226
84
APC_HUMAN
216-243
28
0
-
-
1.10
ENST00000257430
10
ENSE00000972228
chr5:
112136976-112137080
105
APC_HUMAN
244-278
35
0
-
-
1.12
ENST00000257430
12
ENSE00000917801
chr5:
112151192-112151290
99
APC_HUMAN
279-311
33
0
-
-
1.13b
ENST00000257430
13b
ENSE00000917803
chr5:
112154663-112155041
379
APC_HUMAN
312-438
127
0
-
-
1.14a
ENST00000257430
14a
ENSE00000917804
chr5:
112157593-112157688
96
APC_HUMAN
438-470
33
0
-
-
1.16a
ENST00000257430
16a
ENSE00000917807
chr5:
112162805-112162944
140
APC_HUMAN
470-516
47
0
-
-
1.17
ENST00000257430
17
ENSE00000760099
chr5:
112163626-112163703
78
APC_HUMAN
517-542
26
0
-
-
1.18b
ENST00000257430
18b
ENSE00000917809
chr5:
112164553-112164669
117
APC_HUMAN
543-581
39
0
-
-
1.19
ENST00000257430
19
ENSE00000972229
chr5:
112170648-112170862
215
APC_HUMAN
582-653
72
0
-
-
1.20g
ENST00000257430
20g
ENSE00000972230
chr5:
112173250-112181936
8687
APC_HUMAN
653-2843
2191
1
B:2035-2050
16
2.1b
ENST00000262320
1b
ENSE00001951737
chr16:
402659-402369
291
AXIN1_HUMAN
-
0
0
-
-
2.2a
ENST00000262320
2a
ENSE00001331290
chr16:
397106-396148
959
AXIN1_HUMAN
1-293
293
1
A:117-248
132
2.3
ENST00000262320
3
ENSE00001600675
chr16:
364683-364543
141
AXIN1_HUMAN
293-340
48
0
-
-
2.4
ENST00000262320
4
ENSE00001656456
chr16:
360069-359973
97
AXIN1_HUMAN
340-372
33
0
-
-
2.5
ENST00000262320
5
ENSE00001708564
chr16:
354441-354304
138
AXIN1_HUMAN
373-418
46
0
-
-
2.6b
ENST00000262320
6b
ENSE00001784908
chr16:
348251-347722
530
AXIN1_HUMAN
419-595
177
0
-
-
2.7
ENST00000262320
7
ENSE00001670914
chr16:
347226-347056
171
AXIN1_HUMAN
595-652
58
0
-
-
2.8a
ENST00000262320
8a
ENSE00001736616
chr16:
343718-343488
231
AXIN1_HUMAN
652-729
78
0
-
-
2.8d
ENST00000262320
8d
ENSE00000663689
chr16:
341297-341190
108
AXIN1_HUMAN
729-765
37
0
-
-
2.8e
ENST00000262320
8e
ENSE00000663690
chr16:
339607-339440
168
AXIN1_HUMAN
765-821
57
0
-
-
2.9d
ENST00000262320
9d
ENSE00001143123
chr16:
338248-337440
809
AXIN1_HUMAN
821-862
42
0
-
-
[
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]
SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d1emua_ (A:)
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Classes
(
)
(
)
Folds
(
)
(
)
Superfamilies
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)
(
)
Families
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)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All alpha proteins
(14657)
Fold
:
Regulator of G-protein signaling, RGS
(52)
Superfamily
:
Regulator of G-protein signaling, RGS
(52)
Family
:
Regulator of G-protein signaling, RGS
(27)
Protein domain
:
Axin RGS-homologous domain
(2)
Human (Homo sapiens) [TaxId: 9606]
(2)
1a
d1emua_
A:
[
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CATH Domains
(2, 2)
Info
all CATH domains
1a: CATH_1emuA01 (A:117-147,A:233-248)
2a: CATH_1emuA02 (A:148-232)
View:
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Classes
(
)
(
)
Architectures
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)
(
)
Topologies
(
)
(
)
Homologous Superfamilies
(
)
(
)
Organisms
(
)
(
)
Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
Regulator of G-protein Signalling 4; domain 1
(15)
Homologous Superfamily
:
[code=1.10.196.10, no name defined]
(14)
Human (Homo sapiens)
(8)
1a
1emuA01
A:117-147,A:233-248
Topology
:
Regulator of G-protein Signalling 4; domain 2
(19)
Homologous Superfamily
:
Regulator of G-protein Signalling 4, domain 2
(19)
Human (Homo sapiens)
(11)
2a
1emuA02
A:148-232
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Pfam Domains
(0, 0)
Info
all PFAM domains
View:
Select:
Label:
Sorry, no Info available
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